BLASTX nr result

ID: Bupleurum21_contig00028062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028062
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330403.1| predicted protein [Populus trichocarpa] gi|2...   127   4e-30
gb|AFK37255.1| unknown [Medicago truncatula]                          100   3e-29
gb|AFK45797.1| unknown [Lotus japonicus]                              100   1e-28
ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   129   6e-28
gb|AFK40983.1| unknown [Medicago truncatula]                           96   1e-17

>ref|XP_002330403.1| predicted protein [Populus trichocarpa] gi|222871788|gb|EEF08919.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  127 bits (319), Expect(2) = 4e-30
 Identities = 64/77 (83%), Positives = 68/77 (88%)
 Frame = -2

Query: 275 KLLFQVSVAERSVNRGRFLVTTPGDIRSENADMSNEKSCEKHDRLPVEGFLRSVNLRRVN 96
           KLLFQVSVA   VN GRFLVT PGDI+SENAD+SNEKSCEKH+RLPVEGFL SVNLRRVN
Sbjct: 19  KLLFQVSVARCFVNWGRFLVTRPGDIKSENADISNEKSCEKHNRLPVEGFLCSVNLRRVN 78

Query: 95  RSLRKPRKGCRPMGTRK 45
           R LR PRKGCR MGT+K
Sbjct: 79  RPLRNPRKGCRLMGTQK 95



 Score = 30.8 bits (68), Expect(2) = 4e-30
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -1

Query: 312 RAQVIHRSDETLKA 271
           RAQVIHRSDETLKA
Sbjct: 5   RAQVIHRSDETLKA 18


>gb|AFK37255.1| unknown [Medicago truncatula]
          Length = 69

 Score = 99.8 bits (247), Expect(2) = 3e-29
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -3

Query: 403 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 269
           MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC
Sbjct: 1   MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45



 Score = 55.5 bits (132), Expect(2) = 3e-29
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = -1

Query: 264 SSVSSGTFCQSGKVFGDNTWRYQK 193
           SSVSSGTFCQSGKVFGDNTWRYQK
Sbjct: 46  SSVSSGTFCQSGKVFGDNTWRYQK 69


>gb|AFK45797.1| unknown [Lotus japonicus]
          Length = 69

 Score = 99.8 bits (247), Expect(2) = 1e-28
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -3

Query: 403 MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 269
           MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC
Sbjct: 1   MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESC 45



 Score = 53.5 bits (127), Expect(2) = 1e-28
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -1

Query: 264 SSVSSGTFCQSGKVFGDNTWRYQK 193
           SSVSSGTFCQSGKVFGDNTWRY K
Sbjct: 46  SSVSSGTFCQSGKVFGDNTWRYHK 69


>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355477403|gb|AES58606.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 1106

 Score =  129 bits (325), Expect = 6e-28
 Identities = 78/131 (59%), Positives = 78/131 (59%)
 Frame = +1

Query: 13   GMVL*SKQLRHFRVPIGRQPXXXXXXXXXXXXXXXXXXKPSTGRRSCFSQDFSLLMSAFS 192
            G V  SKQLRHFRVPIGRQP                  KPSTGRRSCFSQD SLLMSAFS
Sbjct: 702  GRVRKSKQLRHFRVPIGRQPFRGFLRDRLTLRRLTERRKPSTGRRSCFSQDLSLLMSAFS 761

Query: 193  LLISPGVVTKNLPRLTERSATDT*KSSFQGLVASVNHLSPDTFSVPWS*TSELLRFLQRM 372
            LLISPGVVTKNLPRLTER                               TSELLRFLQRM
Sbjct: 762  LLISPGVVTKNLPRLTERP------------------------------TSELLRFLQRM 791

Query: 373  AASKPTSWLSS 405
            AASKPTSWLSS
Sbjct: 792  AASKPTSWLSS 802



 Score =  118 bits (296), Expect = 1e-24
 Identities = 59/67 (88%), Positives = 60/67 (89%)
 Frame = +2

Query: 533  SEFPWGW*GEMGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPHT 712
            S FP     + GHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPHT
Sbjct: 801  SSFPGVGKAKWGHPSPLSALPRAIDIIRSTEIDFAENQLYPILVGLSPLATSHPRILPHT 860

Query: 713  WVRSSKA 733
            WVRSSKA
Sbjct: 861  WVRSSKA 867


>gb|AFK40983.1| unknown [Medicago truncatula]
          Length = 45

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = -2

Query: 179 MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRKPRKGCRPMGTRK 45
           MSN+KSCEKHDRLPVEGFLRSVNLRRVNRSLRKPRKGCRPMGTRK
Sbjct: 1   MSNDKSCEKHDRLPVEGFLRSVNLRRVNRSLRKPRKGCRPMGTRK 45


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