BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028043
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...   209   6e-52
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   183   6e-44
ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   181   2e-43
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   177   4e-42

>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  209 bits (533), Expect = 6e-52
 Identities = 114/242 (47%), Positives = 150/242 (61%)
 Frame = +2

Query: 8   IDVIVQKMESDSECILDWDXXXXXXXXXTKVGCLDKALLMLKKCEGLIQTSRTNNYKYDY 187
           ID IV +MESD   ILDW+          KVG +DK L+M+KK E LI  ++ +N  +D 
Sbjct: 238 IDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELID-AKGSNVAFDN 296

Query: 188 LITQYAAIGNKAEVLQIWERYKKQGKIYNNGYKSMIMSLLKFDDITSAENVFEEWESSQL 367
           L+  YA    + E+ ++W  YKK+ KIYN GY +MI SLLKFDDI +AE V EEWES +L
Sbjct: 297 LLKLYAETRQRDELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVLEEWESRRL 356

Query: 368 IRDVRIPTYLIGYYCRKGLLVEAEALVNRVKEKDAKFNQITSYYMATGYFGCGQFQKAIE 547
             D R+P +LI  YCRKGL  +AEALVN++  K       T +Y+A GY    Q  KA+E
Sbjct: 357 SYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVE 416

Query: 548 AFRRAISECQKGWPLPSKDFIISCLEYLKGNNEARQAEELIRLLAAKGIIPVDFEKKLLS 727
           A ++A+  C   W  PSK+ + +CLEYL+GN +   A E IR L  +GI  V   K+LLS
Sbjct: 417 ALKKAVVVCPPNWK-PSKNTLATCLEYLEGNRDVEGAGEFIRFLQNEGIFSVGVCKRLLS 475

Query: 728 YI 733
           YI
Sbjct: 476 YI 477


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  183 bits (464), Expect = 6e-44
 Identities = 106/244 (43%), Positives = 143/244 (58%)
 Frame = +2

Query: 2   ESIDVIVQKMESDSECILDWDXXXXXXXXXTKVGCLDKALLMLKKCEGLIQTSRTNNYKY 181
           E ++  ++++ESD   +LDW          +KVG LDKAL MLK+CE LI T    +  Y
Sbjct: 234 EGLEKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLI-TGERRSTPY 292

Query: 182 DYLITQYAAIGNKAEVLQIWERYKKQGKIYNNGYKSMIMSLLKFDDITSAENVFEEWESS 361
           DYL+TQYA  G K +VL++WE +K+   + N    S+I SLLKFDD+ SAE +FEEWES 
Sbjct: 293 DYLMTQYATTGTKEDVLRVWELHKRY--VGNRKNISVITSLLKFDDLESAEKIFEEWESQ 350

Query: 362 QLIRDVRIPTYLIGYYCRKGLLVEAEALVNRVKEKDAKFNQITSYYMATGYFGCGQFQKA 541
           +L  D+ IP +L+  Y RKGLL +AE L+ R      K N  T Y +A GY    Q  KA
Sbjct: 351 KLCDDIIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKA 410

Query: 542 IEAFRRAISECQKGWPLPSKDFIISCLEYLKGNNEARQAEELIRLLAAKGIIPVDFEKKL 721
           +EA +  I         PS    ++CL++LK + +   AE  I LL  K II +D + KL
Sbjct: 411 VEAMKEMI-VLSGPRSRPSTVSWVACLQHLKDSGDMDNAEGFINLLREKDIISLDIQDKL 469

Query: 722 LSYI 733
           LSYI
Sbjct: 470 LSYI 473


>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  182 bits (461), Expect = 1e-43
 Identities = 103/243 (42%), Positives = 141/243 (58%), Gaps = 1/243 (0%)
 Frame = +2

Query: 8   IDVIVQKMESDSECILDWDXXXXXXXXXTKVGCLDKALLMLKKCEGLIQTSRTNNYKYDY 187
           I+  + KMESD    LDW           KVG +DKAL ML+K E L+ T +     YD 
Sbjct: 249 IEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSERLV-TGKRRGTAYDS 307

Query: 188 LITQYAAIGNKAEVLQIWERYKKQGKIYNNGYKSMIMSLLKFDDITSAENVFEEWE-SSQ 364
           LIT YAA G   EVL+IWE YKK  K+Y   Y S+I SLLK DD  +AE +FEEWE  + 
Sbjct: 308 LITLYAATGKTNEVLRIWELYKKNEKVYKEAYISIITSLLKLDDFENAEKIFEEWEFQNH 367

Query: 365 LIRDVRIPTYLIGYYCRKGLLVEAEALVNRVKEKDAKFNQITSYYMATGYFGCGQFQKAI 544
              D+ IP +LI  Y RKGL+ +AE L++R   K  + N  T Y++ATGY   GQ  KA+
Sbjct: 368 SCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHLATGYLQNGQTLKAV 427

Query: 545 EAFRRAISECQKGWPLPSKDFIISCLEYLKGNNEARQAEELIRLLAAKGIIPVDFEKKLL 724
           EA ++A+    + W  PS + + +CL YLK   +  +    + LL    II +D +++LL
Sbjct: 428 EAMKKAVVVSGRMWK-PSNEILANCLGYLKVEGDLGKLTNFMDLLRDNDIISLDIQERLL 486

Query: 725 SYI 733
           ++I
Sbjct: 487 NHI 489


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  181 bits (459), Expect = 2e-43
 Identities = 98/263 (37%), Positives = 150/263 (57%), Gaps = 3/263 (1%)
 Frame = +2

Query: 2    ESIDVIVQKMESDSECILDWDXXXXXXXXXTKVGCLDKALLMLKKCEGLIQTSRTNNYKY 181
            E ++ ++ KME D    + +           K G +DK L+MLK+ E LI +  T  + Y
Sbjct: 227  EGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLI-SGNTRRFAY 285

Query: 182  DYLITQYAAIGNKAEVLQIWERYKKQGKIYNNGYKSMIMSLLKFDDITSAENVFEEWESS 361
            ++L+T Y A GNKAEV +IW +YK+ G+ +N+GY  MI SLLK DDI  AE +FEEW+S 
Sbjct: 286  EFLLTLYTASGNKAEVYRIWNKYKEIGRFFNSGYICMISSLLKLDDIDGAERIFEEWDSK 345

Query: 362  QLIRDVRIPTYLIGYYCRKGLLVEAEALVNRVKEKDAKFNQITSYYMATGYFGCGQFQKA 541
            +++ D+RIP  ++  Y RKG L +AE  +N++     + +  +  ++A GY   GQ  KA
Sbjct: 346  KVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKA 405

Query: 542  IEAFRRAISECQKGWPLPSKDFIISCLEYLKGNNEARQAEELIRLLAAKGIIPVDFEKKL 721
            +E  R+AIS  + GW  PS   + +CLE+LKG  +A   EEL+++             KL
Sbjct: 406  VETIRKAISVSKPGWK-PSLLTLSACLEFLKGQGDAETLEELLKIAKEHCCFSAGAYAKL 464

Query: 722  LSYIGTNSVSN---KFIEEDFAN 781
             S I   +++      +EED+ N
Sbjct: 465  SSCIDNENLTTIALDQMEEDYQN 487


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  177 bits (448), Expect = 4e-42
 Identities = 95/256 (37%), Positives = 144/256 (56%)
 Frame = +2

Query: 2   ESIDVIVQKMESDSECILDWDXXXXXXXXXTKVGCLDKALLMLKKCEGLIQTSRTNNYKY 181
           E ++ ++ K+E+D     DW+          K    +KA+ MLKK E  I + R+  + Y
Sbjct: 222 EGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFI-SGRSRRFGY 280

Query: 182 DYLITQYAAIGNKAEVLQIWERYKKQGKIYNNGYKSMIMSLLKFDDITSAENVFEEWESS 361
           + L+T YA +GNK EV +IW  YK  GK +N GY +M+ SLLK DD+  AE  FEEW S 
Sbjct: 281 EILLTLYATMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSG 340

Query: 362 QLIRDVRIPTYLIGYYCRKGLLVEAEALVNRVKEKDAKFNQITSYYMATGYFGCGQFQKA 541
               D R+P  LI  YC+KGLL +AE LV+R  E+  +   +T   +A GY    Q +KA
Sbjct: 341 NKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKA 400

Query: 542 IEAFRRAISECQKGWPLPSKDFIISCLEYLKGNNEARQAEELIRLLAAKGIIPVDFEKKL 721
           ++  ++A+    +GW  P+   + +CLEYLKG  +  +AE LIRLL  + ++      +L
Sbjct: 401 VDTLKKALLATSQGWK-PNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDSDRL 459

Query: 722 LSYIGTNSVSNKFIEE 769
           ++YI +    +  I +
Sbjct: 460 VNYIRSEEPGSSTIAQ 475