BLASTX nr result

ID: Bupleurum21_contig00028037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028037
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864744.1| myb family transcription factor [Arabidopsis...   159   9e-37
ref|NP_200970.1| myb-like transcription factor family protein [A...   158   3e-36
ref|XP_002511019.1| conserved hypothetical protein [Ricinus comm...   153   6e-35
ref|XP_002278155.1| PREDICTED: transcription factor MYB1R1-like ...   149   9e-34
ref|XP_002888750.1| hypothetical protein ARALYDRAFT_476127 [Arab...   141   3e-31

>ref|XP_002864744.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
           gi|297310579|gb|EFH41003.1| myb family transcription
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score =  159 bits (403), Expect = 9e-37
 Identities = 99/257 (38%), Positives = 139/257 (54%), Gaps = 8/257 (3%)
 Frame = -2

Query: 838 EVECMRKSKSMGNLHEICNREENHGVAANGG-----DDSGYHSDDVLHVNSGRAAHGRKK 674
           EV  +RKS S+GNL  +   ++++G   NG      DD+GYHSD  +H   G+ AH +KK
Sbjct: 50  EVTALRKSLSLGNLDALLANDDSNG---NGDPIAAVDDTGYHSDGQIHSKKGKTAHEKKK 106

Query: 673 GTPWTASEHRSFLLGLNKLGKGDWKGISKNYVPTRTPTQVASHAQKYFIRMTAAEKKNRR 494
           G PWT  EHR+FL+GLNKLGKGDW+GI+K++V TRTPTQVASHAQKYFIR+   +K+ RR
Sbjct: 107 GKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVTTRTPTQVASHAQKYFIRLNVNDKRKRR 166

Query: 493 ASLFDIPYE---EKELHSPPHXXXXXXXXXSEGSQQVNTTSAGDPLKKNNENRGLDGISA 323
           ASLFDI  E   EKE++                SQ  +T+S+  P K     + + GI  
Sbjct: 167 ASLFDISLEDQKEKEMN----------------SQDASTSSSKTPPK-----QPITGIQQ 205

Query: 322 HIAASEKKPPLSPATRTYVPDTCHIPYMVGVPGQSFPAAHVMPHTEAYPMLNYQYASYYY 143
            +   +    +S   ++   +   I Y    P  +FP     P   + P +  ++     
Sbjct: 206 PVVQGQTHTEISNRFQSLSMEYMPI-YQTVPPYYNFPPLMFHPMYYSTPEVPVRFVHPSG 264

Query: 142 VPNNGNIPAPMMTQTPN 92
           +P   +IP  M     N
Sbjct: 265 IPVPRHIPIGMPQSQSN 281


>ref|NP_200970.1| myb-like transcription factor family protein [Arabidopsis thaliana]
           gi|9758477|dbj|BAB09006.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010115|gb|AED97498.1|
           myb-like transcription factor family protein
           [Arabidopsis thaliana]
          Length = 317

 Score =  158 bits (399), Expect = 3e-36
 Identities = 76/131 (58%), Positives = 99/131 (75%), Gaps = 4/131 (3%)
 Frame = -2

Query: 838 EVECMRKSKSMGNLHEICNREENHG----VAANGGDDSGYHSDDVLHVNSGRAAHGRKKG 671
           EV  +RKS S+GNL  +   +E++G    +AA   DD+GYHSD  +H   G+ AH +KKG
Sbjct: 50  EVTALRKSLSLGNLDALLANDESNGSGDPIAAV--DDTGYHSDGQIHSKKGKTAHEKKKG 107

Query: 670 TPWTASEHRSFLLGLNKLGKGDWKGISKNYVPTRTPTQVASHAQKYFIRMTAAEKKNRRA 491
            PWT  EHR+FL+GLNKLGKGDW+GI+K++V TRTPTQVASHAQKYFIR+   +K+ RRA
Sbjct: 108 KPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRA 167

Query: 490 SLFDIPYEEKE 458
           SLFDI  E+++
Sbjct: 168 SLFDISLEDQK 178


>ref|XP_002511019.1| conserved hypothetical protein [Ricinus communis]
           gi|223550134|gb|EEF51621.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 333

 Score =  153 bits (387), Expect = 6e-35
 Identities = 110/278 (39%), Positives = 143/278 (51%), Gaps = 19/278 (6%)
 Frame = -2

Query: 826 MRKSKSMGNLHEICNR--EENHGVAANGGDDSGYHSDDVLHVNSGRAAHGRKKGTPWTAS 653
           +++S S+GNL  + +    ++H  A     D GY SD  +     +AAH RKKG PWT  
Sbjct: 46  IQRSVSLGNLDSLPDTGDADHHDHA-----DDGYMSDGYIDSKRCKAAHKRKKGKPWTEE 100

Query: 652 EHRSFLLGLNKLGKGDWKGISKNYVPTRTPTQVASHAQKYFIRMTAAEKKNRRASLFDIP 473
           EHR FL GL+KLGKGDW+GISKN+V TRTPTQVASHAQKYF+R +AA+KK RR+SLFD+ 
Sbjct: 101 EHRIFLEGLDKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQSAADKKKRRSSLFDMT 160

Query: 472 YEEKELHSPPHXXXXXXXXXSEGSQQVNTTSAGDPLKKNNENRGLDGISAHIAASEKKP- 296
             E  L S P             +    TTS+  PLKK  E +    +        K P 
Sbjct: 161 LRESVLASQPQ----ELSIFPASTSSQATTSSALPLKKTTEVQ--SNVITRAQVINKFPH 214

Query: 295 -----PLSPATRTYVP----DTCHIPYMVGVPG--QSFPAAHVMPHTEAYPMLNYQYASY 149
                P+  A  + VP        IPYM+G P   QS+ A   +       M+NY  +  
Sbjct: 215 LFLDNPVPMANPSVVPIAVSSYAGIPYMLGFPSNRQSYLAGKNIQAAPFLHMVNYNCSGL 274

Query: 148 YY-----VPNNGNIPAPMMTQTPNGLFLQPRPVLHGPS 50
            Y      P +    AP+ T  P+G+   PR    GPS
Sbjct: 275 GYPFTSKSPGSFTTCAPIPTH-PSGI-PTPRSFPEGPS 310


>ref|XP_002278155.1| PREDICTED: transcription factor MYB1R1-like [Vitis vinifera]
          Length = 205

 Score =  149 bits (377), Expect = 9e-34
 Identities = 74/125 (59%), Positives = 89/125 (71%)
 Frame = -2

Query: 841 EEVECMRKSKSMGNLHEICNREENHGVAANGGDDSGYHSDDVLHVNSGRAAHGRKKGTPW 662
           +E E MRKS SMGNL   CN E +HG       D+GY SD +L    G+ AH RKKG PW
Sbjct: 41  KEDEAMRKSLSMGNLQS-CNIEHHHG-------DAGYLSDGLLQSRRGKRAHERKKGVPW 92

Query: 661 TASEHRSFLLGLNKLGKGDWKGISKNYVPTRTPTQVASHAQKYFIRMTAAEKKNRRASLF 482
           +  EHR+FL GL KLGKGDW+GI+K +V TRTPTQVASHAQKYF+R  A +K+ RR SLF
Sbjct: 93  SEEEHRTFLAGLEKLGKGDWRGIAKKFVTTRTPTQVASHAQKYFLRRAACDKRKRRPSLF 152

Query: 481 DIPYE 467
           D+P +
Sbjct: 153 DMPLD 157


>ref|XP_002888750.1| hypothetical protein ARALYDRAFT_476127 [Arabidopsis lyrata subsp.
           lyrata] gi|297334591|gb|EFH65009.1| hypothetical protein
           ARALYDRAFT_476127 [Arabidopsis lyrata subsp. lyrata]
          Length = 249

 Score =  141 bits (355), Expect = 3e-31
 Identities = 76/136 (55%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
 Frame = -2

Query: 829 CMRKSKSMGNLHEICNREENHGVAANGGDDSGYHSDDVLHVNSGRAAHGRKKGTPWTASE 650
           C RKS SM NL +     +      N  DD GY SDDV+H  SGR    RK+GTPWT  E
Sbjct: 53  CFRKSLSMNNLSQFDQTPD-----PNPADDGGYASDDVVHA-SGRNRE-RKRGTPWTEEE 105

Query: 649 HRSFLLGLNKLGKGDWKGISKNYVPTRTPTQVASHAQKYFIRMTAAEKKNRRASLFDI-- 476
           HR FL GL+K+GKGDW+GIS+N+V TRTPTQVASHAQKYF+R T   ++ RR+SLFDI  
Sbjct: 106 HRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITP 165

Query: 475 ------PYEEKELHSP 446
                 P EE  LH+P
Sbjct: 166 DSFTGSPKEENLLHTP 181


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