BLASTX nr result

ID: Bupleurum21_contig00028035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028035
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149998.1| PREDICTED: uncharacterized protein LOC101207...    86   2e-21
ref|XP_003523673.1| PREDICTED: uncharacterized protein LOC100818...    89   2e-20
gb|ADA60976.1| short internode related sequence 5 [Brassica rapa...    90   2e-20
ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250...    84   2e-20
ref|XP_003527675.1| PREDICTED: uncharacterized protein LOC100805...    91   2e-20

>ref|XP_004149998.1| PREDICTED: uncharacterized protein LOC101207689 [Cucumis sativus]
           gi|449531384|ref|XP_004172666.1| PREDICTED:
           uncharacterized LOC101207689 [Cucumis sativus]
          Length = 331

 Score = 85.9 bits (211), Expect(2) = 2e-21
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -1

Query: 326 KDCMYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERHQRLVGLQ 195
           KDC ++RCRTCCKSRGFHC+THVKSTWVPAAKRRER  +L  LQ
Sbjct: 119 KDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQ 162



 Score = 41.6 bits (96), Expect(2) = 2e-21
 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
 Frame = -2

Query: 160 QTLQLHRSDRDDNLLAKRLKDSH-------LVANLGASSGLEATNFPAEVTSVAVFRCVR 2
           Q LQLH  D +     KR +D +       L+     +SGLE  NFPAE+ S AVFRCVR
Sbjct: 171 QQLQLHGGDNNP----KRHRDYNSSSLACTLIPTNNNTSGLEIGNFPAELNSPAVFRCVR 226


>ref|XP_003523673.1| PREDICTED: uncharacterized protein LOC100818588 [Glycine max]
          Length = 305

 Score = 89.4 bits (220), Expect(2) = 2e-20
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -1

Query: 326 KDCMYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERHQRLVGLQHQ 189
           KDC +LRCRTCCKSRGF CQTHVKSTWVPAAKRRERHQ+L  LQ Q
Sbjct: 112 KDCAHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERHQQLAELQLQ 157



 Score = 34.7 bits (78), Expect(2) = 2e-20
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
 Frame = -2

Query: 169 QNYQTLQLHRSDRD--DNLLAKRLKDSHLVANLGAS----SGLEATNFPAEVTSVAVFRC 8
           Q    LQL +  R   DN+  +   D+     L ++    +GLE   FPAEV++ A+FRC
Sbjct: 149 QQLAELQLQQQFRGVGDNIPKRHHPDTTTSTQLASAPQPVTGLELGQFPAEVSTSALFRC 208

Query: 7   VR 2
           VR
Sbjct: 209 VR 210


>gb|ADA60976.1| short internode related sequence 5 [Brassica rapa subsp.
           pekinensis]
          Length = 345

 Score = 89.7 bits (221), Expect(2) = 2e-20
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -1

Query: 326 KDCMYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERHQRLVGLQHQAA 183
           KDC ++RCRTCCKSRGFHCQTHVKSTWVPAAKRRER  +L  LQH +A
Sbjct: 129 KDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSA 176



 Score = 33.9 bits (76), Expect(2) = 2e-20
 Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -2

Query: 88  VANLGASSGLEATN-FPAEVTSVAVFRCVR 2
           V N  ++SGLEA    P EV+S AVFRCVR
Sbjct: 215 VVNTNSNSGLEAIQKLPPEVSSPAVFRCVR 244


>ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250664 [Vitis vinifera]
          Length = 344

 Score = 84.0 bits (206), Expect(2) = 2e-20
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -1

Query: 326 KDCMYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERHQRLVGLQHQAAPQ 177
           KDC+++RCRTCCKSRGF C TH+KSTWVPAAKRRER Q L  +Q Q   Q
Sbjct: 124 KDCIHMRCRTCCKSRGFQCPTHIKSTWVPAAKRRERQQHLTVIQQQQQQQ 173



 Score = 39.7 bits (91), Expect(2) = 2e-20
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
 Frame = -2

Query: 190 KQLPSQDQNYQTLQLHRSDRDDNLLAKRLKDSHLVANLGAS------SGLEATNFPAEVT 29
           +Q   Q Q +Q  Q     R +N   KR +++   + L  +      SGLE  NFP+EV 
Sbjct: 169 QQQQQQQQQHQQHQQQLQLRGEN--PKRQRENPSSSALACTRLPTHTSGLEIANFPSEVN 226

Query: 28  SVAVFRCVR 2
           S AVFRCVR
Sbjct: 227 SPAVFRCVR 235


>ref|XP_003527675.1| PREDICTED: uncharacterized protein LOC100805274 [Glycine max]
          Length = 301

 Score = 91.3 bits (225), Expect(2) = 2e-20
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -1

Query: 326 KDCMYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERHQRLVGLQHQ 189
           KDC +LRCRTCCKSRGF CQTHVKSTWVPAAKRRERHQ+L  LQ Q
Sbjct: 117 KDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERHQQLAALQQQ 162



 Score = 32.3 bits (72), Expect(2) = 2e-20
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = -2

Query: 190 KQLPSQDQNYQTLQLHRSDRDDNLLAKRLKDSHLVANLGASSGLEATNFPAEVTSVAVFR 11
           +QL +  Q +Q  + H  D     LA   +            GLE   FP EV++ AVFR
Sbjct: 154 QQLAALQQQHQHPKRHHRDTTTTQLASAPQPI---------IGLELGQFPPEVSTSAVFR 204

Query: 10  CVR 2
           CVR
Sbjct: 205 CVR 207


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