BLASTX nr result

ID: Bupleurum21_contig00028030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028030
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]          152   3e-35
ref|XP_002517529.1| Auxin-responsive protein IAA1, putative [Ric...   139   2e-31
gb|AEX00358.1| IAA15 [Solanum lycopersicum]                           139   2e-31
ref|XP_002299625.1| predicted protein [Populus trichocarpa] gi|1...   136   2e-30
ref|XP_002280524.2| PREDICTED: auxin-responsive protein IAA17-li...   134   6e-30

>gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]
          Length = 192

 Score =  152 bits (384), Expect = 3e-35
 Identities = 86/151 (56%), Positives = 105/151 (69%), Gaps = 10/151 (6%)
 Frame = -2

Query: 423 ESISSTMNFEETELTLGLPGDSRAATKRALS----------SISGECETNKRKKVSAVVG 274
           ES    MNF +TELTLGLPGDSR  TKR  S          SISG  ++  + +V   VG
Sbjct: 11  ESDVGDMNFNDTELTLGLPGDSRG-TKRGFSEAIDIDKTKTSISGSAKSPPKTQV---VG 66

Query: 273 WPPVKEHQKKNVIKRSCKYVKVAVDGAAFLRKVDLKSYESYDELLSALQDLFGCFCVSDD 94
           WPPVK   +K+V+ R+CKYVKVAVDGA +LRKVDL+ Y SY +LL AL++LF C  + + 
Sbjct: 67  WPPVKA-SRKSVVARNCKYVKVAVDGAPYLRKVDLEMYGSYQQLLEALEELFSCLTIRN- 124

Query: 93  VIMNEKKLVDCVNGRSVEYVPTYEDKDGDWM 1
             +NE+KL+D VNG  VEYVPTYEDKDGDWM
Sbjct: 125 -CLNERKLMDLVNG--VEYVPTYEDKDGDWM 152


>ref|XP_002517529.1| Auxin-responsive protein IAA1, putative [Ricinus communis]
           gi|223543161|gb|EEF44693.1| Auxin-responsive protein
           IAA1, putative [Ricinus communis]
          Length = 217

 Score =  139 bits (351), Expect = 2e-31
 Identities = 86/172 (50%), Positives = 109/172 (63%), Gaps = 31/172 (18%)
 Frame = -2

Query: 423 ESISSTMNFEETELTLGLPGDSRAA--------TKRA--------LSSISGECETN---- 304
           ES ++TMNF ETELTL LPG+SR +        TKR         L S S +C       
Sbjct: 11  ESDTATMNFTETELTLALPGESRVSADNGAKIGTKRGYLQTVDLNLGSCSSDCGNKDCNM 70

Query: 303 ---------KRKKVSA--VVGWPPVKEHQKKNVIKRSCKYVKVAVDGAAFLRKVDLKSYE 157
                    K+  VS   VVGWPPV+ + +KN +K S K+VKVAVDGA +LRKVDL+ Y 
Sbjct: 71  PENDVSSAPKKPPVSKAQVVGWPPVRAY-RKNAMKSS-KFVKVAVDGAPYLRKVDLEMYN 128

Query: 156 SYDELLSALQDLFGCFCVSDDVIMNEKKLVDCVNGRSVEYVPTYEDKDGDWM 1
           SY +LL+AL+D+F CF + +   +NE+K++D VNG  VEYVPTYEDKDGDWM
Sbjct: 129 SYQQLLTALEDMFSCFTIRN--YLNERKIMDQVNG--VEYVPTYEDKDGDWM 176


>gb|AEX00358.1| IAA15 [Solanum lycopersicum]
          Length = 252

 Score =  139 bits (350), Expect = 2e-31
 Identities = 83/168 (49%), Positives = 106/168 (63%), Gaps = 27/168 (16%)
 Frame = -2

Query: 423 ESISSTMNFEETELTLGLPGDSRAATKRAL------------SSISGE-----CETNKRK 295
           E+ +S +NF ETELTLGLPG+SR     A             SS SGE     CE N  K
Sbjct: 53  ETNNSGLNFNETELTLGLPGESRKQISGAKRGNSDGMELSLGSSTSGERRRDICEVNHSK 112

Query: 294 KV----------SAVVGWPPVKEHQKKNVIKRSCKYVKVAVDGAAFLRKVDLKSYESYDE 145
                       + V+GWPPV+ + +KNVI++ CKYVKVAVDGA +LRKVDL+ Y+SY +
Sbjct: 113 NEISTGNKPPAKAQVIGWPPVRSY-RKNVIEK-CKYVKVAVDGAPYLRKVDLEMYDSYQK 170

Query: 144 LLSALQDLFGCFCVSDDVIMNEKKLVDCVNGRSVEYVPTYEDKDGDWM 1
           LL+AL+++F C  + +    +E KL+D  NG  VEYVPTYEDKDGDWM
Sbjct: 171 LLNALENMFTCLTICNS--QSESKLMDLTNG--VEYVPTYEDKDGDWM 214


>ref|XP_002299625.1| predicted protein [Populus trichocarpa] gi|118485628|gb|ABK94664.1|
           unknown [Populus trichocarpa]
           gi|222846883|gb|EEE84430.1| predicted protein [Populus
           trichocarpa]
          Length = 220

 Score =  136 bits (342), Expect = 2e-30
 Identities = 82/172 (47%), Positives = 105/172 (61%), Gaps = 31/172 (18%)
 Frame = -2

Query: 423 ESISSTMNFEETELTLGLPGDSRAAT-------KRAL------------------SSISG 319
           ES ++ ++F+ETELTLGLPG+SR          KR                    +  SG
Sbjct: 11  ESDAANVSFKETELTLGLPGESRGLALIEKTSGKRGFLETVDLNLGRSSNVDSDHNKYSG 70

Query: 318 ECET---NKRKKVSA---VVGWPPVKEHQKKNVIKRSCKYVKVAVDGAAFLRKVDLKSYE 157
           E ET   N  K  +A   VVGWPPV+ + +KN +K SCKYVKVAVDGA +LRKVDL+ Y 
Sbjct: 71  ESETDVPNTAKPPAAKAQVVGWPPVRAY-RKNAMK-SCKYVKVAVDGAPYLRKVDLEMYN 128

Query: 156 SYDELLSALQDLFGCFCVSDDVIMNEKKLVDCVNGRSVEYVPTYEDKDGDWM 1
           SY +LL+ALQD+F CF  +    +NE+ +++      VEYVPTYEDKDGDWM
Sbjct: 129 SYQQLLNALQDMFSCFSFTIRNYLNERTIMEQEVNNGVEYVPTYEDKDGDWM 180


>ref|XP_002280524.2| PREDICTED: auxin-responsive protein IAA17-like [Vitis vinifera]
          Length = 210

 Score =  134 bits (338), Expect = 6e-30
 Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 20/163 (12%)
 Frame = -2

Query: 429 SQESISSTMNFEETELTLGLPGDSRAATKRALS-----SISGECETNKRKKVSA------ 283
           S ES S+ + F +TELTLGLPG +++ TKR  S     ++ G C T+     S       
Sbjct: 9   SPESSSAGLYFNDTELTLGLPGATKSGTKRGFSDTVGLNLRGPCNTDHASNPSENDVSGD 68

Query: 282 ---------VVGWPPVKEHQKKNVIKRSCKYVKVAVDGAAFLRKVDLKSYESYDELLSAL 130
                    +VGWPPVK   +KNV K S KYVKVAVDGA +LRKVDL+ Y SY +LL +L
Sbjct: 69  SKPPPAKTQIVGWPPVKA-SRKNVAKIS-KYVKVAVDGAPYLRKVDLEMYGSYQQLLGSL 126

Query: 129 QDLFGCFCVSDDVIMNEKKLVDCVNGRSVEYVPTYEDKDGDWM 1
           +D+F CF + +   +NE+KL+D V G   +Y+PTYED+DGDWM
Sbjct: 127 EDMFSCFPIRN--YLNERKLMDPVKGS--DYMPTYEDRDGDWM 165


Top