BLASTX nr result

ID: Bupleurum21_contig00027941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027941
         (2096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516606.1| conserved hypothetical protein [Ricinus comm...   481   e-133
ref|XP_002324261.1| predicted protein [Populus trichocarpa] gi|2...   479   e-133
emb|CBI20936.3| unnamed protein product [Vitis vinifera]              473   e-131
ref|XP_002281904.2| PREDICTED: uncharacterized protein LOC100247...   469   e-129
ref|XP_002880696.1| EMB2410 [Arabidopsis lyrata subsp. lyrata] g...   418   e-114

>ref|XP_002516606.1| conserved hypothetical protein [Ricinus communis]
            gi|223544426|gb|EEF45947.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2119

 Score =  481 bits (1239), Expect = e-133
 Identities = 240/412 (58%), Positives = 314/412 (76%), Gaps = 2/412 (0%)
 Frame = +1

Query: 454  KNNDWVSNGVKFSHFCGTRVELLWKNIGGLRSGLMVNCLKDPFARNKSLVKMLSPVWEEG 633
            KN DW+++ +KFS+FCG  V  L +N+ G RSGL V C+ +PFA++K+LV+ L+P+WEEG
Sbjct: 55   KNQDWITHAIKFSNFCGKYVVFL-RNVLGSRSGLKVECVSEPFAQSKALVRSLAPLWEEG 113

Query: 634  LLLIRCSVFCAVISGVCLLLWYGQVKAKSFVETKLLPSVCAALSEHIQRELDFGKVRRIS 813
            LL IR SVF AVISGVCLL+WYGQ KAKS+VE KLLPSVC+ LS++IQRE+DFGKVR +S
Sbjct: 114  LLFIRGSVFVAVISGVCLLVWYGQNKAKSYVEAKLLPSVCSVLSDYIQREIDFGKVRMVS 173

Query: 814  PLSITLESCSFGPHVEEFSCGEVPTIKLRVLPFASLRRGKIVVDAALHNPSLLVVQKKNY 993
            PLSITLESCS GPH EEFSCGEV T+KLR+ PFASLRRGKIV+DA L +P++++VQKK+Y
Sbjct: 174  PLSITLESCSIGPHNEEFSCGEVATVKLRLCPFASLRRGKIVIDAVLSHPTVVIVQKKDY 233

Query: 994  TWLGIPFTEGVVPRHLSTEEGIDHRTKIRRIAREDAFARMVQERDDAATEAAKTGYILSD 1173
            TWLGIPF++G + RHLSTE+GID+RTK RRIARE+A AR V+ERDD A EAA+ GY++ +
Sbjct: 234  TWLGIPFSDGGLERHLSTEDGIDYRTKRRRIAREEAAARGVRERDDNAKEAAERGYVVPE 293

Query: 1174 GLSSSSQFGIITQSFAGHPTGLATSEPIFCMDERLHWRDHHCMDAGVEYDMKHADLEKSF 1353
              SSSS+  ++ +  + H T +   E I CMDE++HWRDHHC D G  YDMKHADLEKSF
Sbjct: 294  RDSSSSEDNVLKED-STHSTNVTNYESISCMDEKMHWRDHHCTDTGFIYDMKHADLEKSF 352

Query: 1354 GVNTPGSGIKFWPKLIPGLVNHKYKKKTNGRDISAASISAKMRILERSAYAARAYFLGIP 1533
            GV  PGS + FW  +I G   H + +KTNG +ISAA ++AK RILERSA AA  YF G+ 
Sbjct: 353  GVKFPGSSLNFWTSMIKGPKKHFFNRKTNGVNISAAGLNAKTRILERSASAAVMYFNGLS 412

Query: 1534 HSE--DSNHLSGGSDVMNLDKALLKTEGNVTSASTCISSNLYDDITVETQTI 1683
            + E  + +  S    +MNLD  L++++G+ T       + +Y++++ E  T+
Sbjct: 413  NGEFDEPSQSSDSYPLMNLDNLLVQSQGDNT-------AYVYNNVSGECSTV 457


>ref|XP_002324261.1| predicted protein [Populus trichocarpa] gi|222865695|gb|EEF02826.1|
            predicted protein [Populus trichocarpa]
          Length = 693

 Score =  479 bits (1234), Expect = e-133
 Identities = 238/410 (58%), Positives = 311/410 (75%), Gaps = 2/410 (0%)
 Frame = +1

Query: 454  KNNDWVSNGVKFSHFCGTRVELLWKNIGGLRSGLMVNCLKDPFARNKSLVKMLSPVWEEG 633
            K +DWV+  ++FSHFCG  VELL +N  GLR+GL V C+K+PF ++K+LV+ L+PVW+EG
Sbjct: 43   KYSDWVAQAIRFSHFCGKNVELL-RNAIGLRNGLRVECVKEPFVQSKALVRSLAPVWKEG 101

Query: 634  LLLIRCSVFCAVISGVCLLLWYGQVKAKSFVETKLLPSVCAALSEHIQRELDFGKVRRIS 813
            LL++RCSVF AVISGVCLL+WYGQ +AK ++E KLLPSVC+ LS+++QRE+DFGKVR +S
Sbjct: 102  LLIVRCSVFGAVISGVCLLVWYGQNRAKCYIEAKLLPSVCSVLSDYVQREIDFGKVRNVS 161

Query: 814  PLSITLESCSFGPHVEEFSCGEVPTIKLRVLPFASLRRGKIVVDAALHNPSLLVVQKKNY 993
            PLS+TLESCS GPH EEFSCGEVPT+KL++ PFASLRRGKIV+DA L +PS++VVQKK+Y
Sbjct: 162  PLSVTLESCSIGPHGEEFSCGEVPTMKLKLRPFASLRRGKIVIDAILSHPSVMVVQKKDY 221

Query: 994  TWLGIPFTEGVVPRHLSTEEGIDHRTKIRRIAREDAFARMVQERDDAATEAAKTGYILSD 1173
            TWLGIP +EG + RHLS EEGID+RTK RR+ARE++ AR   ERDD A EAA+ GY + +
Sbjct: 222  TWLGIPSSEGGLQRHLSNEEGIDYRTKTRRLAREESAARWDIERDDGAKEAAEKGYTVPE 281

Query: 1174 GLSSSSQFGIITQSFAGHPTGLATSEPIFCMDERLHWRDHHCMDAGVEYDMKHADLEKSF 1353
                 + +  + +  A H T L   E    MD+++HW+DHHCMD G++YD +HA LEKSF
Sbjct: 282  RDPDIAGYD-VPKKDATHSTDLTNYEFFPFMDDKMHWKDHHCMDTGLDYDKRHAHLEKSF 340

Query: 1354 GVNTPGSGIKFWPKLIPGLVNHKYKKKTNGRDISAASISAKMRILERSAYAARAYFLGI- 1530
            GV  PGSG+K W  +I G   HK+KKK NG DISAASI+AK RILERS+ AA AYF G+ 
Sbjct: 341  GVKFPGSGLKLWSSVIRGPKKHKFKKKANGSDISAASINAKRRILERSSTAAVAYFQGLY 400

Query: 1531 -PHSEDSNHLSGGSDVMNLDKALLKTEGNVTSASTCISSNLYDDITVETQ 1677
               S++ +  SGG DVMNLD  L ++ G+ +   +  +S   +D T ++Q
Sbjct: 401  SEKSDEPSQSSGGYDVMNLDSLLAQSGGDYSLDISIDASTGDEDSTAKSQ 450


>emb|CBI20936.3| unnamed protein product [Vitis vinifera]
          Length = 2180

 Score =  473 bits (1218), Expect = e-131
 Identities = 241/402 (59%), Positives = 299/402 (74%), Gaps = 2/402 (0%)
 Frame = +1

Query: 451  AKNNDWVSNGVKFSHFCGTRVELLWKNIGGLRSGLMVNCLKDPFARNKSLVKMLSPVWEE 630
            +K+N W+   ++FS+FCG  + LL +N G  RSG  V CLK+PF+R++SLV+ L P+W+E
Sbjct: 42   SKDNCWIFQPIRFSNFCGRNI-LLLRNFGS-RSGSRVKCLKEPFSRSRSLVRSLVPLWKE 99

Query: 631  GLLLIRCSVFCAVISGVCLLLWYGQVKAKSFVETKLLPSVCAALSEHIQRELDFGKVRRI 810
            GLL +RCSVF AVISGVCLL+WYG+ KAKSF+E KLLPSVC+ LSEHIQR+LDFGKV +I
Sbjct: 100  GLLFVRCSVFLAVISGVCLLVWYGRAKAKSFIEAKLLPSVCSVLSEHIQRDLDFGKVLKI 159

Query: 811  SPLSITLESCSFGPHVEEFSCGEVPTIKLRVLPFASLRRGKIVVDAALHNPSLLVVQKKN 990
            SPLSITLESCS GPH  EFSCGE PT+KLRVLPF+SL RGKIV DA L +PSLL+VQK++
Sbjct: 160  SPLSITLESCSVGPHSGEFSCGEAPTVKLRVLPFSSLMRGKIVFDAVLSHPSLLIVQKRD 219

Query: 991  YTWLGIPFTEGVVPRHLSTEEGIDHRTKIRRIAREDAFARMVQERDDAATEAAKTGYILS 1170
            ++WLGIP +EG + RH+STEE ID+RTK RRIARE+A AR  +ERDDAA +AA+ GYILS
Sbjct: 220  FSWLGIPSSEGGLQRHISTEEVIDYRTKTRRIAREEAAARCARERDDAARQAAEMGYILS 279

Query: 1171 DGLSSSSQFGIITQSFAGHPTGLATSEPIFCMDERLHWRDHHCMDAGVEYDMKHADLEKS 1350
            + +S  S+   + Q  A H  GLA+SE   CMDER HWR+HHCMD GV YD+KHADLEKS
Sbjct: 280  EQISGPSEVDAV-QKDATHSMGLASSESFLCMDERTHWREHHCMDTGVAYDLKHADLEKS 338

Query: 1351 FGVNTPGSGIKFWPKLIPGLVNHKYKKKTNGRDISAASISAKMRILERSAYAARAYFLGI 1530
            FGV   GSG +FW + I      K K+K N  + SAA ++AK RILERSA  A AYF G+
Sbjct: 339  FGVKVSGSGPRFWSRTISVNPRDKLKRKANRSNNSAAGVTAKRRILERSALMASAYFRGL 398

Query: 1531 P--HSEDSNHLSGGSDVMNLDKALLKTEGNVTSASTCISSNL 1650
               + ++ +  + G D   LD  LLK EGN   A  C S N+
Sbjct: 399  SPGNFDEPSQSTAGYDSAKLDNVLLKIEGN---ADGCTSKNV 437


>ref|XP_002281904.2| PREDICTED: uncharacterized protein LOC100247424 [Vitis vinifera]
          Length = 2197

 Score =  469 bits (1208), Expect = e-129
 Identities = 261/527 (49%), Positives = 336/527 (63%), Gaps = 5/527 (0%)
 Frame = +1

Query: 484  KFSHFCGTRVELLWKNIGGLRSGLMVNCLKDPFARNKSLVKMLSPVWEEGLLLIRCSVFC 663
            +FS+FCG  + LL +N G  RSG  V CLK+PF+R++SLV+ L P+W+EGLL +RCSVF 
Sbjct: 5    RFSNFCGRNI-LLLRNFGS-RSGSRVKCLKEPFSRSRSLVRSLVPLWKEGLLFVRCSVFL 62

Query: 664  AVISGVCLLLWYGQVKAKSFVETKLLPSVCAALSEHIQRELDFGKVRRISPLSITLESCS 843
            AVISGVCLL+WYG+ KAKSF+E KLLPSVC+ LSEHIQR+LDFGKV +ISPLSITLESCS
Sbjct: 63   AVISGVCLLVWYGRAKAKSFIEAKLLPSVCSVLSEHIQRDLDFGKVLKISPLSITLESCS 122

Query: 844  FGPHVEEFSCGEVPTIKLRVLPFASLRRGKIVVDAALHNPSLLVVQKKNYTWLGIPFTEG 1023
             GPH  EFSCGE PT+KLRVLPF+SL RGKIV DA L +PSLL+VQK++++WLGIP +EG
Sbjct: 123  VGPHSGEFSCGEAPTVKLRVLPFSSLMRGKIVFDAVLSHPSLLIVQKRDFSWLGIPSSEG 182

Query: 1024 VVPRHLSTEEGIDHRTKIRRIAREDAFARMVQERDDAATEAAKTGYILSDGLSSSSQFGI 1203
             + RH+STEE ID+RTK RRIARE+A AR  +ERDDAA +AA+ GYILS+ +S  S+   
Sbjct: 183  GLQRHISTEEVIDYRTKTRRIAREEAAARCARERDDAARQAAEMGYILSEQISGPSEVDA 242

Query: 1204 ITQSFAGHPTGLATSEPIFCMDERLHWRDHHCMDAGVEYDMKHADLEKSFGVNTPGSGIK 1383
            + Q  A H  GLA+SE   CMDER HWR+HHCMD GV YD+KHADLEKSFGV   GSG +
Sbjct: 243  V-QKDATHSMGLASSESFLCMDERTHWREHHCMDTGVAYDLKHADLEKSFGVKVSGSGPR 301

Query: 1384 FWPKLIPGLVNHKYKKKTNGRDISAASISAKMRILERSAYAARAYFLGIP--HSEDSNHL 1557
            FW + I      K K+K N  + SAA ++AK RILERSA  A AYF G+   + ++ +  
Sbjct: 302  FWSRTISVNPRDKLKRKANRSNNSAAGVTAKRRILERSALMASAYFRGLSPGNFDEPSQS 361

Query: 1558 SGGSDVMNLDKALLKTEGNVTSASTCISSNLYDDITVETQTIG-LNIGENKNNEDKKFDG 1734
            + G D   LD  LLK EGN    ++ +    Y +       IG L IG  KN E  +   
Sbjct: 362  TAGYDSAKLDNVLLKIEGNADGCTSVVDG--YREPIPSANQIGVLKIGGEKNVEHGELRT 419

Query: 1735 DEVFMNGKGTLSLNREMENVTASTRNLGNHIHPEENHYSENTXXXXXXXXXXXXTQDRV- 1911
                   KG+L L   ++    +  +    +  E  + S               T  R+ 
Sbjct: 420  AINDAGSKGSLELGNNIKQDIGNRDDSTTQLITEHKNPSAPVNNISLTHDPFHMTIGRLS 479

Query: 1912 -IEDLSSSVKTSSLGDASVVTTNVSYMNEHMQVDNFINKDKDTKDKS 2049
             +  L  +++  S       T   +  NE +   + +NK+ D  D S
Sbjct: 480  EVRILGENMEPLSEVKGVAKTDECNLNNEVLGGAHVVNKNMDMGDNS 526


>ref|XP_002880696.1| EMB2410 [Arabidopsis lyrata subsp. lyrata]
            gi|297326535|gb|EFH56955.1| EMB2410 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 2134

 Score =  418 bits (1075), Expect = e-114
 Identities = 221/401 (55%), Positives = 283/401 (70%), Gaps = 2/401 (0%)
 Frame = +1

Query: 460  NDWVSNGVKFSHFCGTRVELLWKNIGGLRSGLMVNCLKDPFARNKSLVKMLSPVWEEGLL 639
            NDW++   KFS FCG  V+LL K++   RS + V CLKDPF R+K LV+ L+PVWEEGL 
Sbjct: 45   NDWLAKVAKFSQFCGKNVQLLRKSLDS-RSRMEVKCLKDPFLRSKGLVRALAPVWEEGLF 103

Query: 640  LIRCSVFCAVISGVCLLLWYGQVKAKSFVETKLLPSVCAALSEHIQRELDFGKVRRISPL 819
             +RCSVF AVISGVCLL+WYGQ KA++FVETKLLPSVC+ LSE IQRE+DFGKVRR+SPL
Sbjct: 104  FLRCSVFFAVISGVCLLVWYGQNKARAFVETKLLPSVCSVLSETIQREVDFGKVRRVSPL 163

Query: 820  SITLESCSFGPHVEEFSCGEVPTIKLRVLPFASLRRGKIVVDAALHNPSLLVVQKKNYTW 999
             ITLE+ S GPH EEFSCGEVPT+KL V PFASLRRGKIVVDA L NP++LV QKK++TW
Sbjct: 164  CITLEASSIGPHGEEFSCGEVPTMKLCVRPFASLRRGKIVVDAILSNPTVLVAQKKDFTW 223

Query: 1000 LGIPFTEGVVPRHLSTEEGIDHRTKIRRIAREDAFARMVQERDDAATEAAKTGYILSDGL 1179
            LGIP ++  +P HLS+EEGID RTK RRI+RE+A  R  +ERD+ A +AA+ GYI+    
Sbjct: 224  LGIPLSDTTLPSHLSSEEGIDFRTKTRRISREEAGIRWDEERDNDARKAAEMGYIVP--C 281

Query: 1180 SSSSQFGIITQSFAGHPTGLATSEPIFCMDERLHWRDHHCMDAGVEYDMKHADLEKSFGV 1359
             +SSQ   + +    H T +A      CMDE++H  D HCMD G++YD+KHA+LEK FG+
Sbjct: 282  KNSSQVKDVVK-HDRHFTEIANPNSFICMDEKMHSADQHCMDPGIDYDVKHAELEKPFGI 340

Query: 1360 NTPGSGIKFWPKLIPGLVNHKYKKKTNGRDISAASISAKMRILERSAYAARAYFLGIPHS 1539
              PGSG+KF  K++     +K+K  +   + S + ISAK RIL+RSA AA +YF  +   
Sbjct: 341  KIPGSGLKFLSKMLNVPRKYKFKWNSKSHNNSMSDISAKKRILDRSASAALSYFYSLSQQ 400

Query: 1540 --EDSNHLSGGSDVMNLDKALLKTEGNVTSASTCISSNLYD 1656
              ++ +  S   D ++LD  L+K E          +SN YD
Sbjct: 401  KPDEPSVSSADYDELSLDMLLVKGEKE--------TSNQYD 433


Top