BLASTX nr result

ID: Bupleurum21_contig00027903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027903
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW68337.1| hypothetical protein ZEAMMB73_234536 [Zea mays]         74   2e-11
gb|AFW60928.1| hypothetical protein ZEAMMB73_786393 [Zea mays]         69   3e-10
ref|XP_002461565.1| hypothetical protein SORBIDRAFT_02g004790 [S...    65   4e-09
ref|XP_002467513.1| hypothetical protein SORBIDRAFT_01g029380 [S...    65   6e-09
tpg|DAA60484.1| TPA: hypothetical protein ZEAMMB73_960235 [Zea m...    64   1e-08

>gb|AFW68337.1| hypothetical protein ZEAMMB73_234536 [Zea mays]
          Length = 530

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
 Frame = -2

Query: 398 YNRKIDTRFKKIRE-LGKKFDTLVLEDLEWSNEWITEI----------EGRFWSAVDIAS 252
           Y RK+ +RF+K RE  G  +D LV+ED +W NEWI  +              W  VD+A 
Sbjct: 248 YKRKMKSRFQKRREKAGSSYDPLVIEDFDWDNEWIDSLVVHPGSDNDDNALTWDHVDVAI 307

Query: 251 GASDALEGRNLRRRARDDSTSDPIIYVRCGSGSGTXXXXXXXXXXXXNAPNDDEDVEDDY 72
           GAS++L+GRNL R+AR   T      +R     G             +  +   D EDD 
Sbjct: 308 GASESLQGRNLPRQARQTQTYTRRARMRTQVEDG-------EEAHDSSVDDIGVDPEDDI 360

Query: 71  GLSSDENTQGGRDG 30
            +S D+   GG +G
Sbjct: 361 DVSDDDEANGGEEG 374


>gb|AFW60928.1| hypothetical protein ZEAMMB73_786393 [Zea mays]
          Length = 316

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/141 (34%), Positives = 60/141 (42%), Gaps = 17/141 (12%)
 Frame = -2

Query: 398 YNRKIDTRFKKIRELGKKFDTLVLEDLEWSNEWITEIEGR-------------FWSAVDI 258
           YN+K+  RF+KIRE GK FD L+LED +W NEW+  +                 W  VD 
Sbjct: 173 YNKKMADRFQKIREEGKNFDPLILEDFDWDNEWVDPLANSSHVSNALGDGFNLSWDQVDE 232

Query: 257 ASGASDALEGRNLRRRARDDSTSDPIIYVRCGSGSGTXXXXXXXXXXXXNAPNDDEDVE- 81
           A GAS  L GRN  RRA               +G                A  DDED E 
Sbjct: 233 AIGASAHLRGRNFPRRA---------------AGGCVRRNEDLEEEETNLANEDDEDEEY 277

Query: 80  --DDYGLSSD-ENTQGGRDGE 27
             DD  +  + E +  G DG+
Sbjct: 278 ILDDLDVEDEIEGSNSGNDGD 298


>ref|XP_002461565.1| hypothetical protein SORBIDRAFT_02g004790 [Sorghum bicolor]
           gi|241924942|gb|EER98086.1| hypothetical protein
           SORBIDRAFT_02g004790 [Sorghum bicolor]
          Length = 161

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 14/78 (17%)
 Frame = -2

Query: 398 YNRKIDTRFKKIRE-LGKKFDTLVLEDLEWSNEWITE-------------IEGRFWSAVD 261
           YNRK+ TRF+ +RE  GKK+D LV+E+  W NEW                ++   W  VD
Sbjct: 22  YNRKMRTRFQLMREKAGKKYDPLVIEEFNWDNEWADSLHVSIPSARGSDAVDELTWQHVD 81

Query: 260 IASGASDALEGRNLRRRA 207
            A+GAS AL GRNL RRA
Sbjct: 82  EATGASQALRGRNLPRRA 99


>ref|XP_002467513.1| hypothetical protein SORBIDRAFT_01g029380 [Sorghum bicolor]
           gi|241921367|gb|EER94511.1| hypothetical protein
           SORBIDRAFT_01g029380 [Sorghum bicolor]
          Length = 163

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 50/151 (33%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
 Frame = -2

Query: 398 YNRKIDTRFKKIREL-GKKFDTLVLEDLEWSNEWITEI----------------EGRFWS 270
           YNRK+ TRF+  RE  GK FD LV+ED +W NEW+                    G  W 
Sbjct: 22  YNRKMKTRFQLRREKKGKNFDPLVIEDFDWDNEWVDSSYVHPQGARGCDNGDNGNGLTWE 81

Query: 269 AVDIASGASDALEGRNLRR-----RARDDSTSDPIIYVRCGSGSGTXXXXXXXXXXXXNA 105
            VD A GAS +L GRNL R     RAR     D +++                     N 
Sbjct: 82  HVDEAVGASSSLRGRNLPRNASSKRARYGDPHDLVLF---------------------NE 120

Query: 104 PNDDEDVEDDYGLSSDENTQGGRDGEFNDFE 12
             +DED  DD  +S  E    G +G   + E
Sbjct: 121 EEEDEDPHDDADVSDCEQDPNGSNGGSENVE 151


>tpg|DAA60484.1| TPA: hypothetical protein ZEAMMB73_960235 [Zea mays]
          Length = 148

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
 Frame = -2

Query: 398 YNRKIDTRFKKIRELG-KKFDTLVLEDLEWSNEWI----------TEIEGRFWSAVDIAS 252
           YNRK+  RF+K RE G   +D LVL+D +W NEW+           +     W  VD A 
Sbjct: 22  YNRKMQNRFQKRRETGGTSYDPLVLDDFDWDNEWVHSSVVHAGRDDDEHNLTWEQVDEAI 81

Query: 251 GASDALEGRNLRRRARDDSTSDPIIYVRCGSGSGTXXXXXXXXXXXXNAPNDDEDVEDDY 72
           GAS++L GRN  R+AR  S S    Y R  S                ++ N+  D +DDY
Sbjct: 82  GASESLRGRNFPRQARMYSNS----YQR-RSTMRAHEDEQGEEDDGNDSNNEVVDPQDDY 136

Query: 71  GLSSDENTQGGR 36
                   +GGR
Sbjct: 137 WYGDSYVLRGGR 148


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