BLASTX nr result

ID: Bupleurum21_contig00027888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027888
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150657.1| PREDICTED: uncharacterized WD repeat-contain...   110   9e-23
ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-contain...   109   2e-22
ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communi...   109   3e-22
ref|XP_002301041.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_004150943.1| PREDICTED: uncharacterized WD repeat-contain...   108   5e-22

>ref|XP_004150657.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
          Length = 451

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 6/95 (6%)
 Frame = -2

Query: 293 IQGIPWDRLIFTRENYRETRLSHYRNFVNLPLQQGDLKKECKQVEKGHTFYDFQFNTRLV 114
           IQGIPW+R  FTR+NYRE RLS YRN+ +L   + +L+KEC QVEKG++FYDFQFNTRLV
Sbjct: 70  IQGIPWERFTFTRDNYRENRLSQYRNYESLSSSRAELEKECLQVEKGNSFYDFQFNTRLV 129

Query: 113 KPTVVHFQIITL----ASHEFLL--HYKVFTWEVL 27
           K T+VHFQ+  L    + H+  L  +Y V  W  L
Sbjct: 130 KSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSSL 164


>ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 450

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 6/95 (6%)
 Frame = -2

Query: 293 IQGIPWDRLIFTRENYRETRLSHYRNFVNLPLQQGDLKKECKQVEKGHTFYDFQFNTRLV 114
           IQGIPW+RL FTR+ YRETRL  Y+N+ NL   + +L+K+CK++EKG TFYDFQFNTRLV
Sbjct: 69  IQGIPWERLNFTRDKYRETRLEQYKNYENLSRPREELEKDCKKIEKGSTFYDFQFNTRLV 128

Query: 113 KPTVVHFQIITL----ASHEFLL--HYKVFTWEVL 27
           K T+VHFQ+  L    + H+  L  +Y V  W  L
Sbjct: 129 KSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSSL 163


>ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communis]
           gi|223546979|gb|EEF48476.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 447

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
 Frame = -2

Query: 293 IQGIPWDRLIFTRENYRETRLSHYRNFVNLPLQQGDLKKECKQVEKGHTFYDFQFNTRLV 114
           IQGIPW+RL FTR+ YRETRL  Y+N+ NL   + DL KEC QVEKG  FYDFQFNTRLV
Sbjct: 66  IQGIPWERLNFTRDKYRETRLKQYKNYENLSRSRQDLHKECLQVEKGKNFYDFQFNTRLV 125

Query: 113 KPTVVHFQIITL----ASHEFLL--HYKVFTWEVL 27
           K T+VHFQ+  L    + H+  L  +Y V  W  L
Sbjct: 126 KSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSSL 160


>ref|XP_002301041.1| predicted protein [Populus trichocarpa] gi|222842767|gb|EEE80314.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 6/95 (6%)
 Frame = -2

Query: 293 IQGIPWDRLIFTRENYRETRLSHYRNFVNLPLQQGDLKKECKQVEKGHTFYDFQFNTRLV 114
           IQGIPW+RL FTR+ YRETRL  Y+N+ NL L + +L KEC +VEKG TFYDFQ+NTRLV
Sbjct: 67  IQGIPWERLNFTRDKYRETRLKQYKNYENLSLPRFELDKECLEVEKGQTFYDFQYNTRLV 126

Query: 113 KPTVVHFQIITL----ASHEFLL--HYKVFTWEVL 27
           K T+VHFQ+  L    + H+  L  +Y V  W  L
Sbjct: 127 KSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSSL 161


>ref|XP_004150943.1| PREDICTED: uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
           gi|449510456|ref|XP_004163670.1| PREDICTED:
           uncharacterized WD repeat-containing protein
           C2A9.03-like [Cucumis sativus]
          Length = 452

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
 Frame = -2

Query: 293 IQGIPWDRLIFTRENYRETRLSHYRNFVNLPLQQGDLKKECKQVEKGHTFYDFQFNTRLV 114
           IQGIPW+RL FTRE  RETRL  Y+N+ NL   + DL+KEC QVE GH FYDFQFNTRLV
Sbjct: 71  IQGIPWERLHFTREKCRETRLKQYKNYENLSRPRQDLEKECLQVEMGHAFYDFQFNTRLV 130

Query: 113 KPTVVHFQIITL----ASHEFLL--HYKVFTWEVL 27
           K T+VHFQ+  L    + H+  L  +Y V  W  L
Sbjct: 131 KSTIVHFQLRNLLWATSKHDVYLMQNYSVLHWSSL 165


Top