BLASTX nr result

ID: Bupleurum21_contig00027807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027807
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243...   103   4e-20
emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]   103   4e-20
ref|XP_002509867.1| sumo ligase, putative [Ricinus communis] gi|...    82   1e-13
ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256...    72   1e-10

>ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera]
          Length = 920

 Score =  103 bits (256), Expect = 4e-20
 Identities = 79/220 (35%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
 Frame = -2

Query: 660  PGAYRASTGPTISGQSLNQQQSTGQRYSHIRSQSPGMGRSFSHSPPTQTHQGVMLHRVPS 481
            PGAYR S+G     Q+L QQQS        R+ S  +  S  H   +Q  QG    R   
Sbjct: 695  PGAYRTSSGLPTEPQTLQQQQSP-----QARTHSNLLRSSAHHHSRSQVQQGGAQGRATH 749

Query: 480  --GPFVGQQQEPFRSSAPRARTQTQPYSVQMKTS----SIPSNVDTNRPLTT----NTEG 331
              G  + Q  +P  ++   A+    P  VQ +TS    + P N +  R        N EG
Sbjct: 750  AVGTGISQNAQPMVAAQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGRSTAGEQRGNIEG 809

Query: 330  TVQPLTRPEGIVSPSTADQDWRPTGRMRGSLSGQAYSDALNLYFSQPTQPVLPNRPLANA 151
             VQ ++RPE +V  ++ +Q+WRPTG MRGSL G+AY+ ALN    QPTQP    RP    
Sbjct: 810  MVQAVSRPESLVDLAS-EQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRP-PTP 867

Query: 150  ITSPSDNLSP-LHVPRANSMNNNATQETTHSSMQPANTAG 34
            ITSP     P L     N       Q   +   QPA+T G
Sbjct: 868  ITSPPPGFPPHLQALLTNIRTPLVPQAPNYPMTQPASTTG 907


>emb|CAN82727.1| hypothetical protein VITISV_040324 [Vitis vinifera]
          Length = 901

 Score =  103 bits (256), Expect = 4e-20
 Identities = 79/220 (35%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
 Frame = -2

Query: 660  PGAYRASTGPTISGQSLNQQQSTGQRYSHIRSQSPGMGRSFSHSPPTQTHQGVMLHRVPS 481
            PGAYR S+G     Q+L QQQS        R+ S  +  S  H   +Q  QG    R   
Sbjct: 676  PGAYRTSSGLPTEPQTLQQQQSP-----QARTHSNLLRSSAHHHSRSQVQQGGAQGRATH 730

Query: 480  --GPFVGQQQEPFRSSAPRARTQTQPYSVQMKTS----SIPSNVDTNRPLTT----NTEG 331
              G  + Q  +P  ++   A+    P  VQ +TS    + P N +  R        N EG
Sbjct: 731  AVGTGISQNAQPMVAAQRAAQMTRMPLPVQNQTSRTGSAFPVNANGGRSTAGEQRGNIEG 790

Query: 330  TVQPLTRPEGIVSPSTADQDWRPTGRMRGSLSGQAYSDALNLYFSQPTQPVLPNRPLANA 151
             VQ ++RPE +V  ++ +Q+WRPTG MRGSL G+AY+ ALN    QPTQP    RP    
Sbjct: 791  MVQAVSRPESLVDLAS-EQNWRPTGLMRGSLVGRAYNSALNQLVIQPTQPTQSTRP-PTP 848

Query: 150  ITSPSDNLSP-LHVPRANSMNNNATQETTHSSMQPANTAG 34
            ITSP     P L     N       Q   +   QPA+T G
Sbjct: 849  ITSPPPGFPPHLQALLTNIRTPLVPQAPNYPMTQPASTTG 888


>ref|XP_002509867.1| sumo ligase, putative [Ricinus communis] gi|223549766|gb|EEF51254.1|
            sumo ligase, putative [Ricinus communis]
          Length = 853

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 78/226 (34%), Positives = 108/226 (47%), Gaps = 10/226 (4%)
 Frame = -2

Query: 678  STPSQHPGAYRASTGPTISGQSLNQQQSTGQRYSHIRSQSPGMGRSFSHSP--PTQTHQG 505
            +T +  PGA  AS+G  I  Q+L+Q  +   R    RS SP +GRS S  P   +QT QG
Sbjct: 631  ATSNNFPGAPSASSGLRIESQNLHQHLAV--RLPQSRSHSPSIGRSSSALPLPRSQTQQG 688

Query: 504  VMLHRVPSGPFVGQQQEPFRSSAPRARTQT--QPYSV--QMKTSSIPS--NVDTNRPLTT 343
            V      S P     Q P  ++A + + Q   QP SV  Q+ TS   S  N D  R    
Sbjct: 689  V-----GSTPGAPNGQYPRFTAATQRQVQMTRQPPSVPVQIPTSRGTSYLNTDATRTSAI 743

Query: 342  NTEGTVQPLTRPEGI--VSPSTADQDWRPTGRMRGSLSGQAYSDALNLYFSQPTQPVLPN 169
               G V  L    G   V   +++ +W+PTGRMRGSLS QA S   +L   QPTQP    
Sbjct: 744  VQRGNVGELQVNSGTAAVVEKSSEHNWQPTGRMRGSLSSQAVSAYKDLII-QPTQPTQTP 802

Query: 168  RPLANAITSPSDNLSPLHVPRANSMNNNATQETTHSSMQPANTAGN 31
            +P +++  SP +    L    +NS N    ++   +  Q A+  G+
Sbjct: 803  QPSSSSNPSPPNVPPQLEAFLSNSRNFYTPRKQNSAMSQSASIDGS 848


>ref|XP_002304521.1| predicted protein [Populus trichocarpa] gi|222841953|gb|EEE79500.1|
            predicted protein [Populus trichocarpa]
          Length = 822

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 72/198 (36%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
 Frame = -2

Query: 669  SQHPGAYRASTGPTISGQSLNQQQSTGQRYSHIRSQSPGMGRSFSHSPPTQTHQGVMLHR 490
            SQ  GA+RAS+   +  Q L   QS        RS SP + RS     P QT QG     
Sbjct: 604  SQLAGAHRASSPNLLYQQPLRVPQS--------RSHSPNVVRSSLPLAPAQTQQGAAQVG 655

Query: 489  V--PSGPFVGQQQEPFRSSAPRARTQTQPYSV--QMKTSSIPSNVDTNR-----PLTT-- 343
            V   +G    QQ     ++   A+   QP SV  Q++TS   ++  T+      P T   
Sbjct: 656  VGNSAGATNSQQSRLMVAAQLAAQRARQPPSVPVQIQTSGAGASYLTSADGIRAPATEQR 715

Query: 342  -NTEGTVQPLTRPEGIVSPSTADQDWRPTGRMRGSLSGQAYSDALNLYFSQPTQPVLPNR 166
             N  G +  ++  EG+V  ++ +Q+WRPTGRMRGSLSG+AYS AL  +  QPTQ     R
Sbjct: 716  GNAGGALPAVSGTEGLVDLAS-EQNWRPTGRMRGSLSGRAYSAALKEFMVQPTQQTQTPR 774

Query: 165  PLANAITSPSDNLSPLHV 112
            P  N    PS +  P H+
Sbjct: 775  PPPN--LPPSQSSMPPHL 790


>ref|XP_002275586.2| PREDICTED: uncharacterized protein LOC100256919 [Vitis vinifera]
          Length = 881

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 64/194 (32%), Positives = 91/194 (46%)
 Frame = -2

Query: 648  RASTGPTISGQSLNQQQSTGQRYSHIRSQSPGMGRSFSHSPPTQTHQGVMLHRVPSGPFV 469
            R +  P+I  QS+ +QQ +G   S +    P   R   H+   Q  Q V + R P  P V
Sbjct: 684  RNNVHPSIHVQSMQRQQRSGG--SQVTGSVPN--RQSPHAAAAQ--QTVQVSRSP--PSV 735

Query: 468  GQQQEPFRSSAPRARTQTQPYSVQMKTSSIPSNVDTNRPLTTNTEGTVQPLTRPEGIVSP 289
              Q  P       ART T  +SV M    + +  +  R    N  GT     RP+   + 
Sbjct: 736  PVQLRP-------ARTGTA-FSVGMVAEQLRTAGEQRR----NILGTAWSTPRPDASAAL 783

Query: 288  STADQDWRPTGRMRGSLSGQAYSDALNLYFSQPTQPVLPNRPLANAITSPSDNLSPLHVP 109
             T D++WRP+GRMRGSL+G+AYS ALN +  QPTQP     P  +  ++    L    + 
Sbjct: 784  PT-DENWRPSGRMRGSLTGEAYSAALNQFMLQPTQPTQAPLPPTSLPSNLPGGLPAFRLF 842

Query: 108  RANSMNNNATQETT 67
             ++S  +NA    T
Sbjct: 843  PSSSNEHNAAPSQT 856


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