BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027791
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   246   3e-63
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   226   6e-57
dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]    215   1e-53
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]    214   2e-53
gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]        212   9e-53

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  246 bits (629), Expect = 3e-63
 Identities = 142/268 (52%), Positives = 166/268 (61%), Gaps = 3/268 (1%)
 Frame = -1

Query: 795 FRSIKGHKFTKEASSKKALLNLTHD--KGESYIFEFDNFPDRDACRDFVATAIAPPVIAG 622
           FR IKGHKF+K  S+K ALLNLT D  KG  YIFEF+N+PDR+ CR+FV  A+A    A 
Sbjct: 48  FRFIKGHKFSKGGSNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEAS 107

Query: 621 NSASDRSTVPPSSEQLSTAEMERRIKLLQVNSELQKLHKEFVMGGVLTEADFWATRKVTN 442
            + S++S V    EQLST EMERRIKLL+ +SELQKLHK+FV+ GVLTEA+FWATRK   
Sbjct: 108 KAGSEQSAVKLFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRK--- 164

Query: 441 SCRSFIMLIFWSVASLE*REV*ACXXXXXXXXXXXIHVLLSK*LTSHLQKLLDDKTSNTL 262
                                                            KLLD  TS T 
Sbjct: 165 -------------------------------------------------KLLDGNTSRTS 175

Query: 261 KQRAGLKSDMI-NVKPSSDGQSNRVTFNLTQEIIHQIFAEKPAVRRAYLNFVPSKMTEKD 85
           KQR G KS MI ++KP +DG++NRVTFNLT EIIHQIFAEKPAV +A+LNFVP+KMTEKD
Sbjct: 176 KQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKD 235

Query: 84  FWTKYSRAEYLQSTKNIVXXXXXXXEDE 1
           FW KY RAEYL  T+N V       EDE
Sbjct: 236 FWNKYCRAEYLHCTRNTVAAAAEAAEDE 263


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  226 bits (575), Expect = 6e-57
 Identities = 142/311 (45%), Positives = 166/311 (53%), Gaps = 46/311 (14%)
 Frame = -1

Query: 795 FRSIKGHKFTKEASSKKALLNLTHD--KGESYIFEFDNFPDRDACRDFVATAIAPPVIAG 622
           FR IKGHKF+K  S+K ALLNLT D  KG  YIFEF+N+PDR+ CR+FV  A+A    A 
Sbjct: 48  FRFIKGHKFSKGGSNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGKALAKFSEAS 107

Query: 621 NSASDRSTVPPSSEQLSTAEMERRIKLLQVN----------------------------- 529
            + S++S V    EQLST EMERRIKLL+ +                             
Sbjct: 108 KAGSEQSAVKLFDEQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMK 167

Query: 528 --------------SELQKLHKEFVMGGVLTEADFWATRKVTNSCRSFIMLIFWSVASLE 391
                         SELQKLHK+FV+ GVLTEA+FWATRK                    
Sbjct: 168 LIDSGIASKVKWDCSELQKLHKQFVLSGVLTEAEFWATRK-------------------- 207

Query: 390 *REV*ACXXXXXXXXXXXIHVLLSK*LTSHLQKLLDDKTSNTLKQRAGLKSDMIN-VKPS 214
                                           KLLD  TS T KQR G KS MI+ +KP 
Sbjct: 208 --------------------------------KLLDGNTSRTSKQRVGFKSAMISDLKPL 235

Query: 213 SDGQSNRVTFNLTQEIIHQIFAEKPAVRRAYLNFVPSKMTEKDFWTKYSRAEYLQSTKNI 34
           +DG++NRVTFNLT EIIHQIFAEKPAV +A+LNFVP+KMTEKDFW KY RAEYL  T+N 
Sbjct: 236 TDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNT 295

Query: 33  VXXXXXXXEDE 1
           V       EDE
Sbjct: 296 VAAAAEAAEDE 306


>dbj|BAK05807.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  215 bits (547), Expect = 1e-53
 Identities = 130/277 (46%), Positives = 161/277 (58%), Gaps = 12/277 (4%)
 Frame = -1

Query: 795 FRSIKGHKFTKEASSKKA--LLNLTH--DKGESYIFEFDNFPDRDACRDFVATAIAPPVI 628
           FRSIKGHKF K   SK    LLNL+   DKG  YIFEFDN  +RD CRDFVA  +     
Sbjct: 47  FRSIKGHKFNKVDGSKPTPPLLNLSKVSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQ- 105

Query: 627 AGNSASDRSTVPPSS-------EQLSTAEMERRIKLLQVNSELQKLHKEFVMGGVLTEAD 469
              +   R  VPP         EQLS+AEMERR+KLL+ +SELQKLHK+FV+G +L E++
Sbjct: 106 --GTVPARPNVPPEKLAVSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESE 163

Query: 468 FWATRKVTNSCRSFIMLIFWSVASLE*REV*ACXXXXXXXXXXXIHVLLSK*LTSHLQKL 289
           FWATRK                                                     L
Sbjct: 164 FWATRK----------------------------------------------------NL 171

Query: 288 LDDKTSNTLKQRAGLKSDMI-NVKPSSDGQSNRVTFNLTQEIIHQIFAEKPAVRRAYLNF 112
           LDD+T+ + KQ+ G KS M+ +V+PS+DGQ+N+VTF+LT EIIHQIFAEKPAV RA+L++
Sbjct: 172 LDDETNKSSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDY 231

Query: 111 VPSKMTEKDFWTKYSRAEYLQSTKNIVXXXXXXXEDE 1
           VP K++EKDFWTKY RAEYL  TKN +       +DE
Sbjct: 232 VPKKLSEKDFWTKYCRAEYLLRTKNTLAAKAEAADDE 268


>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 596

 Score =  214 bits (544), Expect = 2e-53
 Identities = 130/274 (47%), Positives = 160/274 (58%), Gaps = 9/274 (3%)
 Frame = -1

Query: 795 FRSIKGHKFTKEASSKK--ALLNLTHD--KGESYIFEFDNFPDRDACRDFVATAIAP--- 637
           F++IKGHKF K   SK   ALLNL+ D  KG  YIFEFDN  +RD CRDFVA  +     
Sbjct: 43  FQTIKGHKFNKVDGSKPTPALLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKYQG 102

Query: 636 -PVIAGNSASDRSTVPPSSEQLSTAEMERRIKLLQVNSELQKLHKEFVMGGVLTEADFWA 460
                 N   + S V    EQLS+AEMERR+KLL+ +SELQKLHK+FV+G +L E++FWA
Sbjct: 103 TVPARPNVPPELSAVSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWA 162

Query: 459 TRKVTNSCRSFIMLIFWSVASLE*REV*ACXXXXXXXXXXXIHVLLSK*LTSHLQKLLDD 280
           TRK                                                     LLDD
Sbjct: 163 TRK----------------------------------------------------NLLDD 170

Query: 279 KTSNTLKQRAGLKSDMI-NVKPSSDGQSNRVTFNLTQEIIHQIFAEKPAVRRAYLNFVPS 103
           +TS   KQ+ G KS M+ +V+PS+DGQ+N+VTF+LT EIIHQIFAEKPAV RA+L++VP 
Sbjct: 171 ETSKGSKQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPK 230

Query: 102 KMTEKDFWTKYSRAEYLQSTKNIVXXXXXXXEDE 1
           K++EKDFWTKY RAEYL  TKN +       EDE
Sbjct: 231 KLSEKDFWTKYCRAEYLLRTKNTLAAKAEAAEDE 264


>gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]
          Length = 476

 Score =  212 bits (539), Expect = 9e-53
 Identities = 122/272 (44%), Positives = 154/272 (56%), Gaps = 7/272 (2%)
 Frame = -1

Query: 795 FRSIKGHKFTKEASSKKALLNLT-HDKGESYIFEFDNFPDRDACRDFVATA------IAP 637
           FR+IKGHKF K   +K ALLNL+  DK   YIFEFDN  +RD CRDFVA        I P
Sbjct: 47  FRTIKGHKFNKVEGNKAALLNLSKEDKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGIVP 106

Query: 636 PVIAGNSASDRSTVPPSSEQLSTAEMERRIKLLQVNSELQKLHKEFVMGGVLTEADFWAT 457
           P      A + S    + EQLS AE+ERR+KLL+ +SELQKLHK+FV+G +L E++FWAT
Sbjct: 107 P--RPTVAPENSVASAALEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWAT 164

Query: 456 RKVTNSCRSFIMLIFWSVASLE*REV*ACXXXXXXXXXXXIHVLLSK*LTSHLQKLLDDK 277
           RK                                                     LLDD+
Sbjct: 165 RK----------------------------------------------------NLLDDE 172

Query: 276 TSNTLKQRAGLKSDMINVKPSSDGQSNRVTFNLTQEIIHQIFAEKPAVRRAYLNFVPSKM 97
            +   KQ+ G KS +++++P++DG++N+VTF +T E+IHQIFAEKPAVRRAYL+FVP KM
Sbjct: 173 ANKRSKQKPGFKSALVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLDFVPKKM 232

Query: 96  TEKDFWTKYSRAEYLQSTKNIVXXXXXXXEDE 1
           +E  FW KY RAEYL  TKN          DE
Sbjct: 233 SETRFWEKYCRAEYLVRTKNTAAATAEAAGDE 264