BLASTX nr result

ID: Bupleurum21_contig00027740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027740
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317736.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_002330565.1| predicted protein [Populus trichocarpa] gi|2...    77   4e-12
ref|XP_002333553.1| predicted protein [Populus trichocarpa] gi|2...    77   4e-12
ref|XP_002330564.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002330562.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11

>ref|XP_002317736.1| predicted protein [Populus trichocarpa] gi|222858409|gb|EEE95956.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 41/74 (55%), Positives = 47/74 (63%)
 Frame = +1

Query: 532 VSFLVLLFAISSAAASTLLQDKFYQCLSQKSNIPIPFSPTFYTPNNSSFTSILESTALNL 711
           VS LV+L +      S  +QDKF +CLS  S    PFS   YTPNNSSFT++L STA NL
Sbjct: 9   VSVLVILLSFPFFIVSLPIQDKFLKCLSLNSESSFPFSTILYTPNNSSFTNVLLSTAQNL 68

Query: 712 RFTAPSVSKPLLIF 753
           RF  PSV KP  IF
Sbjct: 69  RFALPSVPKPEFIF 82


>ref|XP_002330565.1| predicted protein [Populus trichocarpa] gi|222872123|gb|EEF09254.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +1

Query: 541 LVLLFAISSAAASTLLQDKFYQCLSQKSNIPIPFSPTFYTPNNSSFTSILESTALNLRFT 720
           ++L+  +S    S  LQD+F +CLS+ S    PFS   YTP NSSFTS+L+S+A NLRFT
Sbjct: 11  ILLVLLLSPFIVSHALQDRFLKCLSRTSESSFPFSTVLYTPKNSSFTSVLQSSAQNLRFT 70

Query: 721 APSVSKPLLIF 753
            PSV KP  IF
Sbjct: 71  FPSVPKPEFIF 81


>ref|XP_002333553.1| predicted protein [Populus trichocarpa] gi|222835542|gb|EEE73977.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +1

Query: 541 LVLLFAISSAAASTLLQDKFYQCLSQKSNIPIPFSPTFYTPNNSSFTSILESTALNLRFT 720
           ++L+  +S    S  LQD+F +CLS+ S    PFS   YTP NSSFTS+L+S+A NLRFT
Sbjct: 11  ILLVLLLSPFIVSHALQDRFLKCLSRTSESSFPFSTVLYTPKNSSFTSVLQSSAQNLRFT 70

Query: 721 APSVSKPLLIF 753
            PSV KP  IF
Sbjct: 71  FPSVPKPEFIF 81


>ref|XP_002330564.1| predicted protein [Populus trichocarpa] gi|222872122|gb|EEF09253.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 541 LVLLFAISSAAASTLLQDKFYQCLSQKSNIPIPFSPTFYTPNNSSFTSILESTALNLRFT 720
           ++L+  +S    S  LQD F +CLS+ S    PFS   YTP NSSFTS+L+S+A NLRFT
Sbjct: 11  ILLVLLLSPFIVSHALQDSFLKCLSRTSESSFPFSTVLYTPKNSSFTSVLQSSAQNLRFT 70

Query: 721 APSVSKPLLIF 753
            P+V KP  IF
Sbjct: 71  LPAVPKPEFIF 81


>ref|XP_002330562.1| predicted protein [Populus trichocarpa] gi|222872120|gb|EEF09251.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +1

Query: 541 LVLLFAISSAAASTLLQDKFYQCLSQKSNIPIPFSPTFYTPNNSSFTSILESTALNLRFT 720
           ++L+  +S    S  LQD F +CLS+ S    PFS   YTP NSSFTS+L+S+A NLRFT
Sbjct: 11  ILLVLLLSPFIVSHALQDSFLKCLSRTSESSFPFSTVLYTPKNSSFTSVLQSSAQNLRFT 70

Query: 721 APSVSKPLLIF 753
            P+V KP  IF
Sbjct: 71  LPAVPKPEFIF 81


Top