BLASTX nr result

ID: Bupleurum21_contig00027717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027717
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323835.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002330086.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABG74583.1| pectate lyase [Musa acuminata AAA Group]                89   4e-16
emb|CAA63496.1| pectate lyase [Musa acuminata AAA Group]               89   4e-16
gb|AAF19195.1|AF206319_1 pectate lyase 1 [Musa acuminata AAA Group]    89   4e-16

>ref|XP_002323835.1| predicted protein [Populus trichocarpa] gi|222866837|gb|EEF03968.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/89 (51%), Positives = 53/89 (59%)
 Frame = +2

Query: 2   NNDYTHWQMYAIGGSQGPTIISQGNRFIAPLDIHLKEVSTFHIL*LIHISLNQCDVTVDV 181
           NNDYTHW+MYAIGGS+ PTIISQGNRFIAP ++HLK+V                      
Sbjct: 343 NNDYTHWRMYAIGGSKHPTIISQGNRFIAPPELHLKQV---------------------- 380

Query: 182 NVCLCV*ITKRELADESEWKSWNWRSEGD 268
                   TKR+ A ESEWK+W WRSE D
Sbjct: 381 --------TKRDYATESEWKTWTWRSEND 401


>ref|XP_002330086.1| predicted protein [Populus trichocarpa] gi|222871220|gb|EEF08351.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/89 (53%), Positives = 51/89 (57%)
 Frame = +2

Query: 2   NNDYTHWQMYAIGGSQGPTIISQGNRFIAPLDIHLKEVSTFHIL*LIHISLNQCDVTVDV 181
           NNDYTHW+MYAIGGSQ PTIISQGNRF+AP D   KEV                      
Sbjct: 327 NNDYTHWEMYAIGGSQHPTIISQGNRFVAPPDPACKEV---------------------- 364

Query: 182 NVCLCV*ITKRELADESEWKSWNWRSEGD 268
                   TKR+ A ES WKSWNWRSEGD
Sbjct: 365 --------TKRDYAVESVWKSWNWRSEGD 385


>gb|ABG74583.1| pectate lyase [Musa acuminata AAA Group]
          Length = 130

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/89 (52%), Positives = 49/89 (55%)
 Frame = +2

Query: 2   NNDYTHWQMYAIGGSQGPTIISQGNRFIAPLDIHLKEVSTFHIL*LIHISLNQCDVTVDV 181
           NNDYTHW+MYAIGGS  PTI SQGNRF+AP D   KEV                      
Sbjct: 21  NNDYTHWEMYAIGGSAAPTINSQGNRFLAPNDRFAKEV---------------------- 58

Query: 182 NVCLCV*ITKRELADESEWKSWNWRSEGD 268
                   TKRE A ESEWK WNWRSEGD
Sbjct: 59  --------TKREDAQESEWKKWNWRSEGD 79


>emb|CAA63496.1| pectate lyase [Musa acuminata AAA Group]
          Length = 398

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/89 (52%), Positives = 49/89 (55%)
 Frame = +2

Query: 2   NNDYTHWQMYAIGGSQGPTIISQGNRFIAPLDIHLKEVSTFHIL*LIHISLNQCDVTVDV 181
           NNDYTHW+MYAIGGS  PTI SQGNRF+AP D   KEV                      
Sbjct: 289 NNDYTHWEMYAIGGSAAPTINSQGNRFLAPNDRFAKEV---------------------- 326

Query: 182 NVCLCV*ITKRELADESEWKSWNWRSEGD 268
                   TKRE A ESEWK WNWRSEGD
Sbjct: 327 --------TKREDAQESEWKKWNWRSEGD 347


>gb|AAF19195.1|AF206319_1 pectate lyase 1 [Musa acuminata AAA Group]
          Length = 407

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/89 (52%), Positives = 49/89 (55%)
 Frame = +2

Query: 2   NNDYTHWQMYAIGGSQGPTIISQGNRFIAPLDIHLKEVSTFHIL*LIHISLNQCDVTVDV 181
           NNDYTHW+MYAIGGS  PTI SQGNRF+AP D   KEV                      
Sbjct: 298 NNDYTHWEMYAIGGSAAPTINSQGNRFLAPNDRFAKEV---------------------- 335

Query: 182 NVCLCV*ITKRELADESEWKSWNWRSEGD 268
                   TKRE A ESEWK WNWRSEGD
Sbjct: 336 --------TKREDAQESEWKKWNWRSEGD 356


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