BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027676
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [...   369   e-100
ref|XP_002530222.1| exosome complex exonuclease rrp42, putative ...   367   2e-99
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   365   8e-99
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp....   361   1e-97

>ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|222861967|gb|EEE99509.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  370 bits (949), Expect = e-100
 Identities = 188/240 (78%), Positives = 207/240 (86%)
 Frame = -1

Query: 721 MVGLSNGEKQFIEGGIAQDLRNDARKRLAYRPIHVETGVIPQANGSARVKIGGTEVIASV 542
           MVGLS GEK FI+GGI Q+LR+D RKR AYRPI +ETGVIPQANGSAR++IG TEVIASV
Sbjct: 1   MVGLSLGEKHFIQGGIDQNLRSDGRKRDAYRPISIETGVIPQANGSARIRIGATEVIASV 60

Query: 541 KAELGRPTALQPDKGKVSIFVDCSPTAAPIFEGRGGEELSTELSGALQKCLLGGKSGAGA 362
           KAELGRP ALQPDKGKV+IFVDCSP A P+FEGRGGEELS ELS ALQ+CLLGGKSGAGA
Sbjct: 61  KAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRCLLGGKSGAGA 120

Query: 361 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVDVAAGAASD 182
           GIDLSSL +  GKICWDLYIDGLV+S           AIKAALSNTGIP+V VAAGA+ D
Sbjct: 121 GIDLSSLIVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180

Query: 181 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMHSAISVSVNRQGLIC 2
           EQPEVDISDEEF+QFDTS VPVI+TLTKVGRHYIVDAT EEES M SA+SVS++R+G IC
Sbjct: 181 EQPEVDISDEEFMQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSISRKGQIC 240


>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
           gi|296082105|emb|CBI21110.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  369 bits (946), Expect = e-100
 Identities = 187/240 (77%), Positives = 208/240 (86%)
 Frame = -1

Query: 721 MVGLSNGEKQFIEGGIAQDLRNDARKRLAYRPIHVETGVIPQANGSARVKIGGTEVIASV 542
           MVGLS GEK FI+GGIAQDLR D R+RL YRP +VETGVIPQANGSARV++GGT+VIASV
Sbjct: 1   MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASV 60

Query: 541 KAELGRPTALQPDKGKVSIFVDCSPTAAPIFEGRGGEELSTELSGALQKCLLGGKSGAGA 362
           KAELG+P+  QPDKGKV+I+VDCSPTAAP+FEGRGGEELSTELSGALQ CLLGGKSGAGA
Sbjct: 61  KAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLGGKSGAGA 120

Query: 361 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVDVAAGAASD 182
           GIDLSSL +V GK+CWDLYIDGLVVS           AIKAAL+NTGIPKV+VA GA+ D
Sbjct: 121 GIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVEVAVGASGD 180

Query: 181 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMHSAISVSVNRQGLIC 2
             PEVDISD+E+LQFDTS VPVI+TLTKVGRHYIVDAT EEES M SA+SVSV+ QG IC
Sbjct: 181 GLPEVDISDDEYLQFDTSGVPVIVTLTKVGRHYIVDATLEEESQMSSAVSVSVSGQGRIC 240


>ref|XP_002530222.1| exosome complex exonuclease rrp42, putative [Ricinus communis]
           gi|223530269|gb|EEF32169.1| exosome complex exonuclease
           rrp42, putative [Ricinus communis]
          Length = 287

 Score =  367 bits (941), Expect = 2e-99
 Identities = 190/240 (79%), Positives = 202/240 (84%)
 Frame = -1

Query: 721 MVGLSNGEKQFIEGGIAQDLRNDARKRLAYRPIHVETGVIPQANGSARVKIGGTEVIASV 542
           MVGLS GE+ FI+GGI Q+LR+D RKR AYRPI VETGVIPQANGSARV+IG TEVIASV
Sbjct: 1   MVGLSVGERNFIQGGINQNLRSDGRKRDAYRPIFVETGVIPQANGSARVRIGATEVIASV 60

Query: 541 KAELGRPTALQPDKGKVSIFVDCSPTAAPIFEGRGGEELSTELSGALQKCLLGGKSGAGA 362
           KAELGRP A QPDKGKV+IFVDCSP A P FE RGGEELS ELS ALQ CLLGGKSGAGA
Sbjct: 61  KAELGRPNAFQPDKGKVAIFVDCSPVAEPTFEARGGEELSAELSAALQHCLLGGKSGAGA 120

Query: 361 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVDVAAGAASD 182
           GIDLSSL +  GKICWDLYIDGLVVS           AIKAALSNTGIPKV VAAG   D
Sbjct: 121 GIDLSSLVVAEGKICWDLYIDGLVVSFDGNLLDALGAAIKAALSNTGIPKVHVAAGGLGD 180

Query: 181 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMHSAISVSVNRQGLIC 2
           EQPEVDISDEEFLQFDTS VPVI+TLTKVGRHYIVDAT EEES+M SA+SVS+NR+G IC
Sbjct: 181 EQPEVDISDEEFLQFDTSGVPVIVTLTKVGRHYIVDATSEEESYMSSAVSVSINRKGHIC 240


>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  365 bits (936), Expect = 8e-99
 Identities = 186/240 (77%), Positives = 204/240 (85%)
 Frame = -1

Query: 721 MVGLSNGEKQFIEGGIAQDLRNDARKRLAYRPIHVETGVIPQANGSARVKIGGTEVIASV 542
           MVGLS GE  FI+GGIAQDLR D RKRL YRPI VETGVIPQ NGSARV++G T+VIASV
Sbjct: 1   MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 541 KAELGRPTALQPDKGKVSIFVDCSPTAAPIFEGRGGEELSTELSGALQKCLLGGKSGAGA 362
           KAELG+P+ LQPDKGKVSI+VDCS TA P FEGRGG+EL+ ELS ALQ+CLLGGKSGAGA
Sbjct: 61  KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120

Query: 361 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVDVAAGAASD 182
           GIDLSSL +V GKICWDLYIDGLVVS           AIKAALSNTGIP+V VAAG ++D
Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180

Query: 181 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMHSAISVSVNRQGLIC 2
           E PEVD+SDEEFLQFDTS VPVI+TLTKVGRHYIVDAT EEES M SA+S+SVNRQG IC
Sbjct: 181 EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240


>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328387|gb|EFH58806.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score =  361 bits (926), Expect = 1e-97
 Identities = 181/240 (75%), Positives = 207/240 (86%)
 Frame = -1

Query: 721 MVGLSNGEKQFIEGGIAQDLRNDARKRLAYRPIHVETGVIPQANGSARVKIGGTEVIASV 542
           MVGLS GE+ F++GGIAQDLR D RKRL YRPI+VETGVIPQANGSARVKIGGT+VIASV
Sbjct: 1   MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60

Query: 541 KAELGRPTALQPDKGKVSIFVDCSPTAAPIFEGRGGEELSTELSGALQKCLLGGKSGAGA 362
           KAE+GRP++LQPDKGKV++F+DCSPTA P F GRGGEELS+EL+ ALQ+CLLGGKSGAGA
Sbjct: 61  KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120

Query: 361 GIDLSSLSIVGGKICWDLYIDGLVVSXXXXXXXXXXXAIKAALSNTGIPKVDVAAGAASD 182
           GI+LSSL I  GK+CWDLYIDGLV+S           AIKAAL+NT IPKV+V+A  A D
Sbjct: 121 GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180

Query: 181 EQPEVDISDEEFLQFDTSAVPVIITLTKVGRHYIVDATPEEESHMHSAISVSVNRQGLIC 2
           EQPE+DISDEE+LQFDTS+VPVI+TLTKVG HYIVDAT EEES M SA+S+SVNR G IC
Sbjct: 181 EQPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRAGHIC 240