BLASTX nr result

ID: Bupleurum21_contig00027648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027648
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD62392.1| pectase lyase [Prunus persica]                         488   e-136
dbj|BAF43573.1| pectate lyase [Prunus persica]                        488   e-136
ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|1...   485   e-135
ref|XP_004171543.1| PREDICTED: probable pectate lyase 15-like [C...   485   e-135
ref|XP_004138973.1| PREDICTED: probable pectate lyase 15-like [C...   485   e-135

>gb|ADD62392.1| pectase lyase [Prunus persica]
          Length = 445

 Score =  488 bits (1257), Expect = e-136
 Identities = 233/267 (87%), Positives = 247/267 (92%), Gaps = 1/267 (0%)
 Frame = -1

Query: 799 ELSNVKSVENVELQSSVNSSMAARL-EDVQDLNEHAVSDPDEVASMVDRSIRNSTERRKL 623
           E+S  ++    ELQSS NSSMAAR+ ED +  N+HAV DP+EV +MVD SIRNSTERRKL
Sbjct: 29  EISGNRNGGTEELQSSSNSSMAARVAEDDESFNKHAVDDPEEVVAMVDMSIRNSTERRKL 88

Query: 622 GFFSCGTGNPIDDCWRCDRNWHRNRKRLADCGIGFGRNAIGGRDGRFYVVTDSRDDDPVN 443
           GFFSCGTGNPIDDCWRCD NW +NRKRLADCGIGFGRNAIGGRDGRFYVVTD  DDDPVN
Sbjct: 89  GFFSCGTGNPIDDCWRCDSNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVN 148

Query: 442 PRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGGCITIQFV 263
           PRPGTLRHAVIQ+ PLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANG CITIQFV
Sbjct: 149 PRPGTLRHAVIQNEPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGACITIQFV 208

Query: 262 TNIIIHGLHIHDCKPTGNALVRSSPTHYGWRTMADGDAISIFGSSHIWVDHNSLSNCADG 83
           TNIIIHGLHIHDCKPTGNALVRSSP+H+GWRTMADGDA+SIFGSSHIWVDHNSLSNCADG
Sbjct: 209 TNIIIHGLHIHDCKPTGNALVRSSPSHFGWRTMADGDAVSIFGSSHIWVDHNSLSNCADG 268

Query: 82  LVDAVMGSTAITVSNNHFTHHNEVMLL 2
           LVDAVMGSTAIT+SNNHFTHHNEVMLL
Sbjct: 269 LVDAVMGSTAITISNNHFTHHNEVMLL 295


>dbj|BAF43573.1| pectate lyase [Prunus persica]
          Length = 425

 Score =  488 bits (1257), Expect = e-136
 Identities = 233/267 (87%), Positives = 247/267 (92%), Gaps = 1/267 (0%)
 Frame = -1

Query: 799 ELSNVKSVENVELQSSVNSSMAARL-EDVQDLNEHAVSDPDEVASMVDRSIRNSTERRKL 623
           E+S  ++    ELQSS NSSMAAR+ ED +  N+HAV DP+EV +MVD SIRNSTERRKL
Sbjct: 9   EISGNRNGGTEELQSSSNSSMAARVAEDDESFNKHAVDDPEEVVAMVDMSIRNSTERRKL 68

Query: 622 GFFSCGTGNPIDDCWRCDRNWHRNRKRLADCGIGFGRNAIGGRDGRFYVVTDSRDDDPVN 443
           GFFSCGTGNPIDDCWRCD NW +NRKRLADCGIGFGRNAIGGRDGRFYVVTD  DDDPVN
Sbjct: 69  GFFSCGTGNPIDDCWRCDSNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVN 128

Query: 442 PRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGGCITIQFV 263
           PRPGTLRHAVIQ+ PLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANG CITIQFV
Sbjct: 129 PRPGTLRHAVIQNEPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGACITIQFV 188

Query: 262 TNIIIHGLHIHDCKPTGNALVRSSPTHYGWRTMADGDAISIFGSSHIWVDHNSLSNCADG 83
           TNIIIHGLHIHDCKPTGNALVRSSP+H+GWRTMADGDA+SIFGSSHIWVDHNSLSNCADG
Sbjct: 189 TNIIIHGLHIHDCKPTGNALVRSSPSHFGWRTMADGDAVSIFGSSHIWVDHNSLSNCADG 248

Query: 82  LVDAVMGSTAITVSNNHFTHHNEVMLL 2
           LVDAVMGSTAIT+SNNHFTHHNEVMLL
Sbjct: 249 LVDAVMGSTAITISNNHFTHHNEVMLL 275


>ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|118488789|gb|ABK96205.1|
           unknown [Populus trichocarpa]
           gi|222845080|gb|EEE82627.1| predicted protein [Populus
           trichocarpa]
          Length = 450

 Score =  485 bits (1249), Expect = e-135
 Identities = 239/300 (79%), Positives = 262/300 (87%), Gaps = 4/300 (1%)
 Frame = -1

Query: 889 MAVYKKXXXXXXXXXXXLYVGA--TSAVRNSGELSNVKSVENVELQSSVNSSMAARLEDV 716
           MAV +K           L+VG   T++  N G  +  +SVE  ++QSS N++MAAR ++ 
Sbjct: 1   MAVSRKWACMFSAVLLLLFVGVMPTTSGTNGGISALTRSVETEKVQSSSNTTMAARSQEE 60

Query: 715 QD-LNEHAVSD-PDEVASMVDRSIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWHRNRKR 542
            D LNE AV+D P+EV SMV+ SIRNSTERR+LG+FSCGTGNPIDDCWRCD NW +NRKR
Sbjct: 61  ADALNEKAVADNPEEVVSMVEMSIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWQKNRKR 120

Query: 541 LADCGIGFGRNAIGGRDGRFYVVTDSRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQ 362
           LADCGIGFGRNAIGGRDGRFYVVTD  D+DPVNPRPGTLRHAVIQD PLWIVFKRDMVIQ
Sbjct: 121 LADCGIGFGRNAIGGRDGRFYVVTDPSDNDPVNPRPGTLRHAVIQDAPLWIVFKRDMVIQ 180

Query: 361 LKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNIIIHGLHIHDCKPTGNALVRSSPTH 182
           LKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTN+IIHGLHIHDCKPTGNA+VRSSP+H
Sbjct: 181 LKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSH 240

Query: 181 YGWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLL 2
           YGWRTMADGDA+SIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLL
Sbjct: 241 YGWRTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLL 300


>ref|XP_004171543.1| PREDICTED: probable pectate lyase 15-like [Cucumis sativus]
          Length = 444

 Score =  485 bits (1248), Expect = e-135
 Identities = 231/278 (83%), Positives = 253/278 (91%), Gaps = 4/278 (1%)
 Frame = -1

Query: 823 TSAVRNSGELSNVKSVENVELQSSVNSSMAARLEDV---QDLN-EHAVSDPDEVASMVDR 656
           T A+    E S +++V   E QSS NSSMA R+E+    Q+LN EHAV +PDE+A+ V+ 
Sbjct: 17  TIALVRKEETSKIRTVSAAEFQSSSNSSMATRVENYDVEQELNNEHAVDNPDEIAASVEM 76

Query: 655 SIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWHRNRKRLADCGIGFGRNAIGGRDGRFYV 476
           SIRNSTERRKLGFFSCGTGNPIDDCWRCD NWHRNRKRLA+CGIGFGRNAIGGRDGRFYV
Sbjct: 77  SIRNSTERRKLGFFSCGTGNPIDDCWRCDSNWHRNRKRLAECGIGFGRNAIGGRDGRFYV 136

Query: 475 VTDSRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHI 296
           VTDS D+DPVNP+PGTLRHAVIQ++PLWIVFKRDMVI+LKQELIMNSFKTID RGVNVHI
Sbjct: 137 VTDSSDNDPVNPKPGTLRHAVIQEKPLWIVFKRDMVIRLKQELIMNSFKTIDARGVNVHI 196

Query: 295 ANGGCITIQFVTNIIIHGLHIHDCKPTGNALVRSSPTHYGWRTMADGDAISIFGSSHIWV 116
           ANG CITIQFVTNIIIHGLHIHDCKPTGNA+VRSSP+H+GWRTMADGDAISIFGSSHIW+
Sbjct: 197 ANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWI 256

Query: 115 DHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLL 2
           DHNSLSNCADGLVDAVMGSTAIT+SNNHFTHHNEVMLL
Sbjct: 257 DHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLL 294


>ref|XP_004138973.1| PREDICTED: probable pectate lyase 15-like [Cucumis sativus]
          Length = 449

 Score =  485 bits (1248), Expect = e-135
 Identities = 231/278 (83%), Positives = 253/278 (91%), Gaps = 4/278 (1%)
 Frame = -1

Query: 823 TSAVRNSGELSNVKSVENVELQSSVNSSMAARLEDV---QDLN-EHAVSDPDEVASMVDR 656
           T A+    E S +++V   E QSS NSSMA R+E+    Q+LN EHAV +PDE+A+ V+ 
Sbjct: 22  TIALVRKEETSKIRTVSAAEFQSSSNSSMATRVENYDVEQELNNEHAVDNPDEIAASVEM 81

Query: 655 SIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWHRNRKRLADCGIGFGRNAIGGRDGRFYV 476
           SIRNSTERRKLGFFSCGTGNPIDDCWRCD NWHRNRKRLA+CGIGFGRNAIGGRDGRFYV
Sbjct: 82  SIRNSTERRKLGFFSCGTGNPIDDCWRCDSNWHRNRKRLAECGIGFGRNAIGGRDGRFYV 141

Query: 475 VTDSRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHI 296
           VTDS D+DPVNP+PGTLRHAVIQ++PLWIVFKRDMVI+LKQELIMNSFKTID RGVNVHI
Sbjct: 142 VTDSSDNDPVNPKPGTLRHAVIQEKPLWIVFKRDMVIRLKQELIMNSFKTIDARGVNVHI 201

Query: 295 ANGGCITIQFVTNIIIHGLHIHDCKPTGNALVRSSPTHYGWRTMADGDAISIFGSSHIWV 116
           ANG CITIQFVTNIIIHGLHIHDCKPTGNA+VRSSP+H+GWRTMADGDAISIFGSSHIW+
Sbjct: 202 ANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWI 261

Query: 115 DHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLL 2
           DHNSLSNCADGLVDAVMGSTAIT+SNNHFTHHNEVMLL
Sbjct: 262 DHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLL 299


Top