BLASTX nr result

ID: Bupleurum21_contig00027611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027611
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinif...   205   4e-51
ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|2235455...   186   2e-45
ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_003553382.1| PREDICTED: protein arv1 homolog [Glycine max]     168   4e-40
ref|XP_003521125.1| PREDICTED: protein arv1 homolog [Glycine max]     166   1e-39

>ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinifera]
           gi|296089029|emb|CBI38732.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  205 bits (521), Expect = 4e-51
 Identities = 92/148 (62%), Positives = 119/148 (80%)
 Frame = +2

Query: 50  LRCVHCGFPLKSLYVQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKEKVYRHL 229
           LRC+HCGFP+K+L++QYSPGNIRLMKCE CK VADEYIECE+MI++IDLILHK K YRHL
Sbjct: 3   LRCIHCGFPIKTLFLQYSPGNIRLMKCENCKAVADEYIECESMIVLIDLILHKPKAYRHL 62

Query: 230 FYNMFTRETLNFEGLLWKLAFGFIILDAYKILVLSRIEDDWKFSLSFATLVSCYGKLFMD 409
            +N+   +TLNF+GLLWK A GF++LDAY+ILVL+R E++W  S+SF++L   + K+ MD
Sbjct: 63  LFNLLNPQTLNFQGLLWKSALGFLLLDAYRILVLTRSEEEWGLSMSFSSLFWRFSKILMD 122

Query: 410 VIFGNLMFLCMLFLGIRILPKASGGSTR 493
           V+FGNL FL +  L  R L    GG++R
Sbjct: 123 VLFGNLAFLSIFLLATRNLLNTVGGASR 150


>ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|223545582|gb|EEF47086.1| arv1,
           putative [Ricinus communis]
          Length = 187

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/142 (63%), Positives = 107/142 (75%)
 Frame = +2

Query: 53  RCVHCGFPLKSLYVQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKEKVYRHLF 232
           RCV CGF +KSLYVQYSPGNIRLMKCE CK VADEYIECE MI++IDLILHK K YRHL 
Sbjct: 3   RCVECGFGVKSLYVQYSPGNIRLMKCENCKAVADEYIECEFMIMLIDLILHKPKAYRHLL 62

Query: 233 YNMFTRETLNFEGLLWKLAFGFIILDAYKILVLSRIEDDWKFSLSFATLVSCYGKLFMDV 412
           YN+  +ET+N EGL+WK A  F++LDAY+ ++L R  ++   SLSF +L     K+FMDV
Sbjct: 63  YNVLNQETVNLEGLIWKSAISFLLLDAYRSILLQRNVEEQVSSLSFPSLFWRSQKIFMDV 122

Query: 413 IFGNLMFLCMLFLGIRILPKAS 478
             GNL FLC+  L  RIL KAS
Sbjct: 123 FLGNLTFLCVFLLATRILLKAS 144


>ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|222861013|gb|EEE98555.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  182 bits (461), Expect = 3e-44
 Identities = 80/142 (56%), Positives = 108/142 (76%)
 Frame = +2

Query: 53  RCVHCGFPLKSLYVQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKEKVYRHLF 232
           RCV CGFP+K+L+VQYSPGNIRLM+CE CK VADEYIECE MI++IDLILHK K YRHL 
Sbjct: 4   RCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLL 63

Query: 233 YNMFTRETLNFEGLLWKLAFGFIILDAYKILVLSRIEDDWKFSLSFATLVSCYGKLFMDV 412
           +N+  + T+NFEG LWK  F F++LDAY+ L+L R E +W  S+SF+++V  + ++ +DV
Sbjct: 64  FNVINQHTVNFEGSLWKSIFAFLLLDAYRSLLLKRNEGEWGSSMSFSSIVWTFEEVIVDV 123

Query: 413 IFGNLMFLCMLFLGIRILPKAS 478
             GN +F C+  L +R++   S
Sbjct: 124 FVGNFVFFCIFLLSMRLMLNTS 145


>ref|XP_003553382.1| PREDICTED: protein arv1 homolog [Glycine max]
          Length = 247

 Score =  168 bits (426), Expect = 4e-40
 Identities = 83/147 (56%), Positives = 102/147 (69%)
 Frame = +2

Query: 53  RCVHCGFPLKSLYVQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKEKVYRHLF 232
           RC+ CG P+K+LYVQYSPGNIRLMKCE CK VADEYIECE MIL IDLILHK K YRHL 
Sbjct: 4   RCIQCGCPVKTLYVQYSPGNIRLMKCENCKAVADEYIECEIMILAIDLILHKPKAYRHLL 63

Query: 233 YNMFTRETLNFEGLLWKLAFGFIILDAYKILVLSRIEDDWKFSLSFATLVSCYGKLFMDV 412
           +N+  +ET+ F+GLLWKLA  F+  + Y+ L+L   +     S+S +  VS   K+ MDV
Sbjct: 64  HNVINQETMKFQGLLWKLAVIFLFFEYYRCLILESSKGKLDSSMSVSPSVSICWKVLMDV 123

Query: 413 IFGNLMFLCMLFLGIRILPKASGGSTR 493
           +FGNLMFL   F  + +L   S   TR
Sbjct: 124 LFGNLMFLLTFFFMVMMLFHVSITITR 150


>ref|XP_003521125.1| PREDICTED: protein arv1 homolog [Glycine max]
          Length = 250

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/137 (58%), Positives = 100/137 (72%)
 Frame = +2

Query: 53  RCVHCGFPLKSLYVQYSPGNIRLMKCEKCKKVADEYIECENMILVIDLILHKEKVYRHLF 232
           RC+ C  P+K+LYVQYSPGNIRLMKCE CK VADEYIECE MILVIDLILHK K YRHL 
Sbjct: 4   RCIQCWCPVKTLYVQYSPGNIRLMKCENCKAVADEYIECEIMILVIDLILHKPKAYRHLL 63

Query: 233 YNMFTRETLNFEGLLWKLAFGFIILDAYKILVLSRIEDDWKFSLSFATLVSCYGKLFMDV 412
           +N+  +ET+ F GLLWKLA  F++ ++Y+ L+L   +     S S ++LVS   K+ MDV
Sbjct: 64  HNVINQETMKFHGLLWKLAVIFLLFESYRCLILESSKGKLGSSNSVSSLVSICWKVLMDV 123

Query: 413 IFGNLMFLCMLFLGIRI 463
           I GNLMFL   F  +++
Sbjct: 124 IIGNLMFLLTFFFMVKM 140


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