BLASTX nr result

ID: Bupleurum21_contig00027570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027570
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533475.1| receptor protein kinase, putative [Ricinus c...   278   3e-73
ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|2...   276   2e-72
ref|XP_002265087.2| PREDICTED: probable receptor protein kinase ...   274   7e-72
ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|2...   272   3e-71
ref|XP_002887010.1| hypothetical protein ARALYDRAFT_475717 [Arab...   271   6e-71

>ref|XP_002533475.1| receptor protein kinase, putative [Ricinus communis]
           gi|223526668|gb|EEF28907.1| receptor protein kinase,
           putative [Ricinus communis]
          Length = 951

 Score =  278 bits (712), Expect = 3e-73
 Identities = 132/190 (69%), Positives = 152/190 (80%)
 Frame = +1

Query: 1   HSNSFSGPLPDLSGLKALESLSIRDNLFTGPVPVSLLNLEGLKVVNLTNNLFQGPMPVFK 180
           HSN FSGPLPD SGLK LE LSIRDN FTGP+P+SL  L  LK VNL+NNLFQGPMPVFK
Sbjct: 251 HSNGFSGPLPDFSGLKDLEVLSIRDNSFTGPIPLSLTALASLKAVNLSNNLFQGPMPVFK 310

Query: 181 GSVSLDLLEDSNSFCLPKAGDCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASWVGITC 360
             VS+DL  DSNSFCLP  GDCD RV +LLLI KS+GYP+RFAE+WKGNDPCA WVGITC
Sbjct: 311 RLVSVDLTADSNSFCLPSPGDCDSRVKTLLLIAKSVGYPQRFAESWKGNDPCADWVGITC 370

Query: 361 SDGNITIINFEKLGLAGTISPEFAALKSLQRLVLADNNLTGTIPEEXXXXXXXXXXDVSN 540
           + GNIT++NF+K+GL GT++PEFA L SLQRLVL +NNLTG+IP+E          DVSN
Sbjct: 371 TGGNITVVNFQKMGLTGTVAPEFAMLLSLQRLVLDNNNLTGSIPQELTTLPALKQLDVSN 430

Query: 541 NHLHGKLPNF 570
           N + GK+P F
Sbjct: 431 NQISGKIPTF 440


>ref|XP_002302927.1| predicted protein [Populus trichocarpa] gi|222844653|gb|EEE82200.1|
           predicted protein [Populus trichocarpa]
          Length = 945

 Score =  276 bits (706), Expect = 2e-72
 Identities = 129/190 (67%), Positives = 158/190 (83%)
 Frame = +1

Query: 1   HSNSFSGPLPDLSGLKALESLSIRDNLFTGPVPVSLLNLEGLKVVNLTNNLFQGPMPVFK 180
           HSN FSGPLPD SGLK LESLS+RDN FTG VP SL+NLE LK VNL+NNL QGPMPVFK
Sbjct: 245 HSNGFSGPLPDFSGLKDLESLSLRDNSFTGLVPESLVNLESLKFVNLSNNLLQGPMPVFK 304

Query: 181 GSVSLDLLEDSNSFCLPKAGDCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASWVGITC 360
            SVS+D+++DSN FCLP    CD RVN+LL IVKS+ YP+R A++WKGNDPCA W+GITC
Sbjct: 305 SSVSVDMVKDSNRFCLPTPDLCDSRVNTLLSIVKSMDYPQRLADSWKGNDPCADWIGITC 364

Query: 361 SDGNITIINFEKLGLAGTISPEFAALKSLQRLVLADNNLTGTIPEEXXXXXXXXXXDVSN 540
           ++GNIT++NFEK+GL G+ISP+FA++KSL+RLVLA+NNLTG+IP+E          DVSN
Sbjct: 365 NNGNITVVNFEKMGLTGSISPDFASVKSLERLVLANNNLTGSIPQEITTLPGLKVLDVSN 424

Query: 541 NHLHGKLPNF 570
           NHL+G++P F
Sbjct: 425 NHLYGRVPAF 434


>ref|XP_002265087.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis
           vinifera]
          Length = 889

 Score =  274 bits (701), Expect = 7e-72
 Identities = 127/190 (66%), Positives = 154/190 (81%)
 Frame = +1

Query: 1   HSNSFSGPLPDLSGLKALESLSIRDNLFTGPVPVSLLNLEGLKVVNLTNNLFQGPMPVFK 180
           HSN+FSGPLPD SGLK L+SLS+RDNLFTG VPVSL+NL  L+ VNLTNN  QGP+P FK
Sbjct: 213 HSNAFSGPLPDFSGLKDLQSLSLRDNLFTGVVPVSLVNLGSLEAVNLTNNFLQGPVPEFK 272

Query: 181 GSVSLDLLEDSNSFCLPKAGDCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASWVGITC 360
            SV++D+  D NSFCLPK G+CDPRVN LL IVKS GYP +FA+NWKGNDPC  W GITC
Sbjct: 273 NSVAVDMTPDGNSFCLPKPGECDPRVNILLSIVKSFGYPTKFAKNWKGNDPCTEWFGITC 332

Query: 361 SDGNITIINFEKLGLAGTISPEFAALKSLQRLVLADNNLTGTIPEEXXXXXXXXXXDVSN 540
           ++GNIT++NF+K+GL GTIS  F++L SLQ+LVLADNN+TG+IP+E          DVSN
Sbjct: 333 NNGNITVVNFQKMGLTGTISSNFSSLISLQKLVLADNNITGSIPKELTTLPALTQLDVSN 392

Query: 541 NHLHGKLPNF 570
           N L+GK+P+F
Sbjct: 393 NQLYGKIPSF 402


>ref|XP_002305223.1| predicted protein [Populus trichocarpa] gi|222848187|gb|EEE85734.1|
           predicted protein [Populus trichocarpa]
          Length = 946

 Score =  272 bits (695), Expect = 3e-71
 Identities = 129/189 (68%), Positives = 153/189 (80%)
 Frame = +1

Query: 4   SNSFSGPLPDLSGLKALESLSIRDNLFTGPVPVSLLNLEGLKVVNLTNNLFQGPMPVFKG 183
           SN FSGPLPD SGLK LESL++RDN FTGPVP SL+NLE LKVVNL+NNL QGPMPVFK 
Sbjct: 246 SNGFSGPLPDFSGLKDLESLNLRDNSFTGPVPESLVNLESLKVVNLSNNLLQGPMPVFKS 305

Query: 184 SVSLDLLEDSNSFCLPKAGDCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASWVGITCS 363
           SVS+D+++DSN FCL   G CD RVN+LL IVKS+ YP R A+ WKGNDPCA W GITC+
Sbjct: 306 SVSVDVVKDSNRFCLSTPGPCDSRVNTLLSIVKSMYYPHRLADGWKGNDPCADWFGITCN 365

Query: 364 DGNITIINFEKLGLAGTISPEFAALKSLQRLVLADNNLTGTIPEEXXXXXXXXXXDVSNN 543
            GNIT++NFEK+GL G+ISP+FA+LKSL+RLVLA+NNLTG IP+E          DVSNN
Sbjct: 366 KGNITVVNFEKMGLTGSISPDFASLKSLERLVLANNNLTGLIPQEITTLPRLKALDVSNN 425

Query: 544 HLHGKLPNF 570
            ++GK+P F
Sbjct: 426 QIYGKVPAF 434


>ref|XP_002887010.1| hypothetical protein ARALYDRAFT_475717 [Arabidopsis lyrata subsp.
           lyrata] gi|297332851|gb|EFH63269.1| hypothetical protein
           ARALYDRAFT_475717 [Arabidopsis lyrata subsp. lyrata]
          Length = 937

 Score =  271 bits (693), Expect = 6e-71
 Identities = 129/190 (67%), Positives = 150/190 (78%)
 Frame = +1

Query: 1   HSNSFSGPLPDLSGLKALESLSIRDNLFTGPVPVSLLNLEGLKVVNLTNNLFQGPMPVFK 180
           HSN FSGPLPD SGLK LESLS+RDN FTGPVP SLL+LE LKV+NLTNN  QGP+PVFK
Sbjct: 235 HSNVFSGPLPDFSGLKELESLSLRDNAFTGPVPTSLLSLESLKVLNLTNNHLQGPVPVFK 294

Query: 181 GSVSLDLLEDSNSFCLPKAGDCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASWVGITC 360
            SVS+DL +DSNSFCLP   +CD RV SLLLI  S  YP+R AE+WKGNDPC +W+GI C
Sbjct: 295 SSVSVDLDKDSNSFCLPSPDECDSRVKSLLLIASSFDYPQRLAESWKGNDPCTNWIGIAC 354

Query: 361 SDGNITIINFEKLGLAGTISPEFAALKSLQRLVLADNNLTGTIPEEXXXXXXXXXXDVSN 540
           S+GNIT+IN EK+GL GTISPEF ++KSLQR++L  NNLTGTIP+E          DVS+
Sbjct: 355 SNGNITVINLEKMGLTGTISPEFGSIKSLQRIILGINNLTGTIPQELTTLPNLKTLDVSS 414

Query: 541 NHLHGKLPNF 570
           N L GK+P F
Sbjct: 415 NKLFGKVPGF 424



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
 Frame = +1

Query: 7   NSFSGPLPDLSGLKALESLSIRDNLFTGPVPVSLLNLEGLKVVNLTNNLFQG---PMPVF 177
           N+ SGP+P LSGL +L+ L + +N F          L  L+ V + NN F+    P  + 
Sbjct: 93  NNISGPVPSLSGLASLQVLMLSNNNFDSIPSDVFEGLTSLQSVEIDNNPFKAWEIPESLR 152

Query: 178 KGSVSLDLLEDSNSFCLPKAG----DCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASW 345
             S   +   +S +      G    D  P ++ L L   SLG       +  G+   + W
Sbjct: 153 NASALQNFSANSANVSGKLPGFFGPDEFPGLSILHLAFNSLG--GELPLSLAGSQVQSLW 210

Query: 346 VGITCSDGNITII----NFEKLGLAGTI----SPEFAALKSLQRLVLADNNLTGTIPEEX 501
           +      G I ++      +++ L   +     P+F+ LK L+ L L DN  TG +P   
Sbjct: 211 LNGQKLTGEINVLQNMTGLKEVWLHSNVFSGPLPDFSGLKELESLSLRDNAFTGPVPTSL 270

Query: 502 XXXXXXXXXDVSNNHLHGKLPNF 570
                    +++NNHL G +P F
Sbjct: 271 LSLESLKVLNLTNNHLQGPVPVF 293



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +1

Query: 217 SFCLPKAGDCDPRVNSLLLIVKSLGYPRRFAENWKGNDPCASWVGITCSDGN-ITIINFE 393
           SF      D D  +++++ + KSL  P  F   W   DPC  W  I C+    +T I   
Sbjct: 11  SFTFLLKSDSDGDLSAMISLKKSLNPPSSFG--WSDPDPC-KWTHIVCTGTKRVTRIQIG 67

Query: 394 KLGLAGTISPEFAALKSLQRLVLADNNLTGTIP 492
             GL GT+SP+   L  L+RL L  NN++G +P
Sbjct: 68  HSGLQGTLSPDLRNLSELERLELQWNNISGPVP 100


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