BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027530
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB86676.1| putative protein [Arabidopsis thaliana]                77   1e-12
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    74   1e-11
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    72   4e-11
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop...    72   4e-11
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ...    72   4e-11

>emb|CAB86676.1| putative protein [Arabidopsis thaliana]
          Length = 534

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
 Frame = +2

Query: 80  RYAFICWLAMHGRLPTLQRLSSFGIQSNQRCFLCIDAIEDQQHLLISCHYSRYIITKLFN 259
           +Y+FI W+A   RL T ++L  +   +N  C  C +A+E ++H+  SC YS  + + L  
Sbjct: 116 KYSFITWIAFRNRLATGEKLVKWNNDANGGCSFCDEAMETREHIFFSCPYSSAVWSALTK 175

Query: 260 LITSATLPDSWTSMVAFLLSLPSP--HKEIAFIAFQICIYHLWRERNSR 400
            +       SW SM A L   P P  H  +    FQ+ I+ LWRERN R
Sbjct: 176 DLLGQLFTTSWESMTALLTDPPRPKVHMFVLRYVFQLSIHTLWRERNGR 224


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +2

Query: 80   RYAFICWLAMHGRLPTLQRLSSFGIQSNQRCFLCIDAIEDQQHLLISCHYSRYIITKLFN 259
            +Y+F+ WL +  RL T  R+ ++       C LC +A E + HL  SC Y+ Y+   L  
Sbjct: 1366 KYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQ 1425

Query: 260  LITSATLPDSWTSMVAFLL--SLPSPHKEIAFIAFQICIYHLWRERNSR 400
             + S      W  +   L   +LP  H  +    FQ  IYH+WRERN+R
Sbjct: 1426 RLLSTNYSRDWNRLFTLLCTSNLPRDHLFLFRYVFQASIYHIWRERNAR 1474


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
 Frame = +2

Query: 80  RYAFICWLAMHGRLPTLQRLSSFGIQSNQRCFLCIDAIEDQQHLLISCHYSRYIITKLFN 259
           +Y+FI WLA   RL T  R+ S+    N  C  C +  E + HL  +C YSR + + L +
Sbjct: 287 KYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVWSGLTS 346

Query: 260 LITSATLPDSWTSMVAFLLSLPSPHKEIAFI--AFQICIYHLWRERNSR 400
            + +      WT+++  L      +  +  +  AFQI +Y +W+ERNSR
Sbjct: 347 KLLTRHYSTDWTTILKLLTDKTLGNNRLFLLRYAFQILVYSIWKERNSR 395


>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
          Length = 278

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +2

Query: 80  RYAFICWLAMHGRLPTLQRLSSFGIQSNQRCFLCIDAIEDQQHLLISCHYSRYIITKLFN 259
           +Y+F+ WLA H RL T  RL  +  ++   C  C + +E + HL  SC YS  I   L  
Sbjct: 123 KYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAK 182

Query: 260 LITSATLPDSWTSMVAFLLSLPSPHKEIAFI--AFQICIYHLWRERNSR 400
            + +     SW+ +   LL    P+  +  +   FQ  I+ LWRERN R
Sbjct: 183 GLLNGRNVSSWSLITPHLLDSSQPYLHVFTLRYTFQALIHSLWRERNGR 231


>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 637

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +2

Query: 80  RYAFICWLAMHGRLPTLQRLSSFGIQSNQRCFLCIDAIEDQQHLLISCHYSRYIITKLFN 259
           +Y+F+ WLA H RL T  RL  +  ++   C  C + +E + HL  SC YS  I   L  
Sbjct: 291 KYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAK 350

Query: 260 LITSATLPDSWTSMVAFLLSLPSPHKEIAFI--AFQICIYHLWRERNSR 400
            + +     SW+ +   LL    P+  +  +   FQ  I+ LWRERN R
Sbjct: 351 GLLNGRNVSSWSLITPHLLDSSQPYLHVFTLRYTFQALIHSLWRERNGR 399