BLASTX nr result

ID: Bupleurum21_contig00027525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027525
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|2...   151   5e-35
ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]          150   1e-34
ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arab...   147   1e-33
ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]          146   2e-33
ref|NP_177400.2| protein PAUSED [Arabidopsis thaliana] gi|145327...   146   2e-33

>ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|223539397|gb|EEF40987.1|
           Exportin-T, putative [Ricinus communis]
          Length = 988

 Score =  151 bits (382), Expect = 5e-35
 Identities = 67/87 (77%), Positives = 80/87 (91%)
 Frame = -2

Query: 262 RDAVVIDMFCRILNSLDDELISLDYPRTTEETAVAARVKDAMREQCISQIVRAWYDIVSM 83
           + A+VIDMFCR+LN+LDDELISLDYPRT EE  VA RVKDAMR+QC+ QIVRAWYDI+SM
Sbjct: 143 KGAIVIDMFCRVLNALDDELISLDYPRTLEELTVAGRVKDAMRQQCVGQIVRAWYDIISM 202

Query: 82  YRNSHPELCASILDTMRRYISWIDIGL 2
           YRNS PE+C+++LD+MRRYISW+DIGL
Sbjct: 203 YRNSDPEVCSNVLDSMRRYISWVDIGL 229


>ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 986

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/84 (84%), Positives = 77/84 (91%)
 Frame = -2

Query: 253 VVIDMFCRILNSLDDELISLDYPRTTEETAVAARVKDAMREQCISQIVRAWYDIVSMYRN 74
           VVIDMFCR+LN+LDDELISLDYPRT EE AVA RVKDAMR+QC+ QIVRAWYDIVSMYRN
Sbjct: 143 VVIDMFCRVLNALDDELISLDYPRTPEELAVAGRVKDAMRQQCVPQIVRAWYDIVSMYRN 202

Query: 73  SHPELCASILDTMRRYISWIDIGL 2
           S  ELC S+LD+MRRYISWIDIGL
Sbjct: 203 SDHELCTSVLDSMRRYISWIDIGL 226


>ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arabidopsis lyrata subsp.
           lyrata] gi|297334725|gb|EFH65143.1| hypothetical protein
           ARALYDRAFT_476390 [Arabidopsis lyrata subsp. lyrata]
          Length = 978

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/87 (77%), Positives = 80/87 (91%)
 Frame = -2

Query: 262 RDAVVIDMFCRILNSLDDELISLDYPRTTEETAVAARVKDAMREQCISQIVRAWYDIVSM 83
           + AVVIDMFCR+LN+LDDELISLDYPRT+EE +VAARVKDAMR+QC+ QI RAWYDIVS+
Sbjct: 142 KGAVVIDMFCRVLNALDDELISLDYPRTSEEISVAARVKDAMRQQCVPQIARAWYDIVSL 201

Query: 82  YRNSHPELCASILDTMRRYISWIDIGL 2
           YRNS P+L A++LD MRR++SWIDIGL
Sbjct: 202 YRNSDPDLSATVLDCMRRFVSWIDIGL 228


>ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 983

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/84 (80%), Positives = 75/84 (89%)
 Frame = -2

Query: 253 VVIDMFCRILNSLDDELISLDYPRTTEETAVAARVKDAMREQCISQIVRAWYDIVSMYRN 74
           VVIDMFCR+LN+LDDELI+LDYPRT EE  VA RVKDAMR+QC+ QIVR WYDIVSMYRN
Sbjct: 143 VVIDMFCRVLNALDDELINLDYPRTPEELTVAGRVKDAMRQQCVCQIVRVWYDIVSMYRN 202

Query: 73  SHPELCASILDTMRRYISWIDIGL 2
           S  ELC S+LD+MRRYISWIDIGL
Sbjct: 203 SDQELCTSVLDSMRRYISWIDIGL 226


>ref|NP_177400.2| protein PAUSED [Arabidopsis thaliana]
           gi|145327223|ref|NP_001077813.1| protein PAUSED
           [Arabidopsis thaliana] gi|334183864|ref|NP_001185383.1|
           protein PAUSED [Arabidopsis thaliana]
           gi|75140113|sp|Q7PC79.1|XPOT_ARATH RecName:
           Full=Exportin-T; AltName: Full=Exportin(tRNA); AltName:
           Full=Protein PAUSED; AltName: Full=tRNA exportin
           gi|34303902|tpg|DAA01277.1| TPA_exp: exportin-t
           [Arabidopsis thaliana] gi|332197219|gb|AEE35340.1|
           protein PAUSED [Arabidopsis thaliana]
           gi|332197220|gb|AEE35341.1| protein PAUSED [Arabidopsis
           thaliana] gi|332197221|gb|AEE35342.1| protein PAUSED
           [Arabidopsis thaliana]
          Length = 988

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/87 (77%), Positives = 79/87 (90%)
 Frame = -2

Query: 262 RDAVVIDMFCRILNSLDDELISLDYPRTTEETAVAARVKDAMREQCISQIVRAWYDIVSM 83
           + AVVIDMFCR+LN+LDDELISLDYPRT EE +VAARVKDAMR+QC+ QI RAWYDIVSM
Sbjct: 142 KGAVVIDMFCRVLNALDDELISLDYPRTPEEISVAARVKDAMRQQCVPQIARAWYDIVSM 201

Query: 82  YRNSHPELCASILDTMRRYISWIDIGL 2
           Y+NS P+L A++LD MRR++SWIDIGL
Sbjct: 202 YKNSDPDLSATVLDCMRRFVSWIDIGL 228


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