BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027484
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...    79   5e-13
emb|CBI20340.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...    73   2e-11
ref|XP_002885089.1| WD-40 repeat family protein [Arabidopsis lyr...    59   4e-07
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...    59   4e-07

>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/80 (56%), Positives = 53/80 (66%), Gaps = 10/80 (12%)
 Frame = -1

Query: 249 DSLDSNS--NYAS---LPIPKFPMGALQNYDVWISQPSSVEERRTRLLRQMGLSREAGRK 85
           D  D N+  NYAS    PIPKFP+GA   YD+WIS+PSS+EERR+RLLR+MGLS +    
Sbjct: 35  DDADPNASPNYASEHPFPIPKFPIGA-SKYDIWISEPSSIEERRSRLLREMGLSNDPSLS 93

Query: 84  R-----DSDNNKFGRSVSSD 40
           R     D  N   GRSVSSD
Sbjct: 94  RVKPTADRSNGDIGRSVSSD 113


>emb|CBI20340.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 10/79 (12%)
 Frame = -1

Query: 249 DSLDSNS--NYAS---LPIPKFPMGALQNYDVWISQPSSVEERRTRLLRQMGLSREAGRK 85
           D  D N+  NYAS    PIPKFP+GA   YD+WIS+PSS+EERR+RLLR+MGLS +    
Sbjct: 35  DDADPNASPNYASEHPFPIPKFPIGA-SKYDIWISEPSSIEERRSRLLREMGLSNDPSLS 93

Query: 84  R-----DSDNNKFGRSVSS 43
           R     D  N   GRSVSS
Sbjct: 94  RVKPTADRSNGDIGRSVSS 112


>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
           gi|449498657|ref|XP_004160597.1| PREDICTED: WD
           repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 13/86 (15%)
 Frame = -1

Query: 255 DVDSLDSNSNYAS---LPIPKFPMGALQNYDVWISQPSSVEERRTRLLRQMGLSREAGRK 85
           D DS+ ++ NY S    PIPKFPM A+ NYD+WIS+P+SV ERR+RLLR+MGLS +    
Sbjct: 36  DRDSIVNSPNYDSEHPFPIPKFPM-AVSNYDIWISEPASVLERRSRLLREMGLSGDPSLS 94

Query: 84  R----------DSDNNKFGRSVSSDH 37
           R          +     FGRSVSSD+
Sbjct: 95  RANTALELDHKEKGVGDFGRSVSSDY 120


>ref|XP_002885089.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330929|gb|EFH61348.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 885

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
 Frame = -1

Query: 213 PIPKFPMGALQNYDVWISQPSSVEERRTRLLRQMGLSREAGRKR-----DSDNNKFGRSV 49
           P+P+FPMGA   +DVWIS+P+SV ERR++LL +MGLSR+    R     DS + + G   
Sbjct: 70  PVPRFPMGA-SKFDVWISEPASVSERRSKLLNEMGLSRDPVLSRLKPVSDSSSKETGAGS 128

Query: 48  SSDHSEVS 25
           S     +S
Sbjct: 129 SDISRSIS 136


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
           gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 944

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = -1

Query: 240 DSNSNYASLPIPKFPMGALQNYDVWISQPSSVEERRTRLLRQMGLSREAGRKRDSDNNKF 61
           D+N+ Y  + +PKF       YDVWIS+P+SV ERR RLL QMGL+        SD  K 
Sbjct: 78  DNNNGYPFV-VPKF-----SGYDVWISEPASVSERRERLLHQMGLA--------SDRAKP 123

Query: 60  GRSVSSDH 37
           GRS SSDH
Sbjct: 124 GRSASSDH 131