BLASTX nr result

ID: Bupleurum21_contig00027475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027475
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Popu...   155   6e-36
sp|O49929.1|OEP24_PEA RecName: Full=Outer envelope pore protein ...   154   2e-35
ref|XP_002510363.1| conserved hypothetical protein [Ricinus comm...   152   5e-35
ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, ...   152   9e-35
ref|XP_003544418.1| PREDICTED: uncharacterized protein LOC100802...   150   3e-34

>ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa]
           gi|222862034|gb|EEE99576.1| hypothetical protein
           POPTRDRAFT_573245 [Populus trichocarpa]
          Length = 212

 Score =  155 bits (393), Expect = 6e-36
 Identities = 79/163 (48%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
 Frame = -2

Query: 693 SLSLYKPGAFNVDYNLSDKDFRFQFINSFKVFKKPVNMVYSHARAYHGTALDGTIRLDSA 514
           +L++ KPG F +DYN+  KDFRFQF+NS KV  KP+N+ Y H R  + T LDGT+ +DSA
Sbjct: 48  ALAVEKPGFFIIDYNVPKKDFRFQFMNSVKVVDKPLNLTYIHCRGDNRTILDGTLVVDSA 107

Query: 513 NKLSGRYEFGSGESKLKYSYTKGS-TKIKPGYDFGKSAWDIAVSQKLKGGNQVKASYQSD 337
           NK+S  Y  G+   KLKY+Y  G  T  +  YDF K++WD A S+K+ G + ++A YQ+ 
Sbjct: 108 NKISANYMLGTENCKLKYTYVHGGLTSFEQCYDFAKNSWDFAGSRKVYGDDVLRAVYQTS 167

Query: 336 TKDLDVDFVKASDTYGNVKVSACVNL-ETLKFPKLMVESTWGF 211
           +K+L +++ + S   GN KVSA +NL E  K PKL  ESTW F
Sbjct: 168 SKNLGMEWSRNSKLNGNFKVSASINLAEESKMPKLTAESTWNF 210


>sp|O49929.1|OEP24_PEA RecName: Full=Outer envelope pore protein 24, chloroplastic;
           AltName: Full=Chloroplastic outer envelope pore protein
           of 24 kDa gi|2764574|emb|CAA04468.1| pore protein of 24
           kD (OEP24) [Pisum sativum]
          Length = 213

 Score =  154 bits (389), Expect = 2e-35
 Identities = 83/171 (48%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
 Frame = -2

Query: 717 SSKGVTFKSLSLYKPGAFNVDYNLSDKDFRFQFINSFKVFKKPVNMVYSHARAYHGTALD 538
           +S  +T   L++ KPG+F+VDYN+  KDFRFQF+N+ +V +KP+N+ Y H++  + T LD
Sbjct: 41  NSPSLTGLVLAVEKPGSFSVDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILD 100

Query: 537 GTIRLDSANKLSGRYEFGSGESKLKYSYT-KGSTKIKPGYDFGKSAWDIAVSQKLKGGNQ 361
           GT+  D +NK+S  Y   SG  KLKYSY  KG T I+P YD  K++WD AVS K+ G + 
Sbjct: 101 GTLVWDPSNKVSANYAVESGNCKLKYSYNHKGLTTIEPTYDVAKNSWDFAVSGKVYGDDS 160

Query: 360 VKASYQSDTKDLDVDFVKASDTYGNVKVSACVNL-ETLKFPKLMVESTWGF 211
           +KASYQ+ +K L +++ + S   G  KV A VNL E  K PKL VEST  F
Sbjct: 161 LKASYQTSSKVLGLEWTRNSKQTGCFKVVASVNLAEEKKIPKLSVESTLNF 211


>ref|XP_002510363.1| conserved hypothetical protein [Ricinus communis]
           gi|223551064|gb|EEF52550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  152 bits (385), Expect = 5e-35
 Identities = 78/162 (48%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
 Frame = -2

Query: 690 LSLYKPGAFNVDYNLSDKDFRFQFINSFKVFKKPVNMVYSHARAYHGTALDGTIRLDSAN 511
           L++ KPG F VDYN+  KDFRFQF+++ KV  KP+N+ Y H+R  + T LDG + LDSAN
Sbjct: 50  LAVEKPGFFMVDYNVPKKDFRFQFMSTIKVADKPLNLTYIHSRGDNRTVLDGALVLDSAN 109

Query: 510 KLSGRYEFGSGESKLKYSYTKGS-TKIKPGYDFGKSAWDIAVSQKLKGGNQVKASYQSDT 334
           KL+  +  GSG  KLKY+Y  G  T  +P YD  K++WD AVS+K+   +  +A+YQ+ +
Sbjct: 110 KLAANHILGSGNCKLKYTYVHGGVTTFEPCYDLAKNSWDFAVSRKVYADDVFRATYQTSS 169

Query: 333 KDLDVDFVKASDTYGNVKVSACVNL-ETLKFPKLMVESTWGF 211
           K L +++ + S   GN K++A VNL E  K PKL  ESTW F
Sbjct: 170 KALGLEWSRNSKFNGNFKIAASVNLAEESKVPKLSAESTWNF 211


>ref|XP_004147789.1| PREDICTED: outer envelope pore protein 24B, chloroplastic-like
           [Cucumis sativus] gi|449476784|ref|XP_004154833.1|
           PREDICTED: outer envelope pore protein 24B,
           chloroplastic-like [Cucumis sativus]
          Length = 212

 Score =  152 bits (383), Expect = 9e-35
 Identities = 78/163 (47%), Positives = 110/163 (67%), Gaps = 2/163 (1%)
 Frame = -2

Query: 693 SLSLYKPGAFNVDYNLSDKDFRFQFINSFKVFKKPVNMVYSHARAYHGTALDGTIRLDSA 514
           +LS+ KPG F VDYN+  KD RFQF+N+ KV +KP+N+ Y H+ A   T LDGT+  DSA
Sbjct: 48  ALSVEKPGFFIVDYNVPKKDLRFQFMNTVKVAEKPLNLTYIHSWADSRTILDGTLVFDSA 107

Query: 513 NKLSGRYEFGSGESKLKYSYT-KGSTKIKPGYDFGKSAWDIAVSQKLKGGNQVKASYQSD 337
           NK+S  +  GSG  KLKY+Y  +G+T  +P YD  K++WD AVS+K+ G +  KA+YQ+ 
Sbjct: 108 NKVSANHALGSGNCKLKYTYVHEGATTFEPSYDVAKNSWDFAVSRKVYGDDVFKATYQTT 167

Query: 336 TKDLDVDFVKASDTYGNVKVSACVNL-ETLKFPKLMVESTWGF 211
           +K L +++ +   + GN KV A VN+ +  K PK+  ESTW F
Sbjct: 168 SKVLGLEWTRNLKSSGNFKVVASVNMADESKRPKVTAESTWNF 210


>ref|XP_003544418.1| PREDICTED: uncharacterized protein LOC100802815 [Glycine max]
          Length = 214

 Score =  150 bits (378), Expect = 3e-34
 Identities = 77/168 (45%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
 Frame = -2

Query: 705 VTFKSLSLYKPGAFNVDYNLSDKDFRFQFINSFKVFKKPVNMVYSHARAYHGTALDGTIR 526
           +T  +L++ KPG+F VDYN+  KDFRFQF+N+ +V ++P+N+ Y+H+R  + T LDGT  
Sbjct: 45  LTGLALAVEKPGSFIVDYNVPKKDFRFQFMNTVRVGERPLNLTYAHSRGDNRTVLDGTFV 104

Query: 525 LDSANKLSGRYEFGSGESKLKYSYT-KGSTKIKPGYDFGKSAWDIAVSQKLKGGNQ-VKA 352
            DSANK+S  Y   SG  KLKY+Y  KG T  +P YD  K+ WD AVS+++ GG+  ++A
Sbjct: 105 YDSANKVSANYALDSGNCKLKYTYVHKGLTTFEPAYDVAKNTWDFAVSRRVYGGDDTLRA 164

Query: 351 SYQSDTKDLDVDFVKASDTYGNVKVSACVNL-ETLKFPKLMVESTWGF 211
           SYQ+ ++ L V++ +        K+ A VNL E  K PKL+ E+TW F
Sbjct: 165 SYQTSSRVLGVEWSRNPKHTAGFKIVASVNLAEEFKAPKLVAETTWNF 212


Top