BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027474
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...    76   3e-12
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    75   7e-12
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    74   9e-12
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/92 (41%), Positives = 48/92 (52%)
 Frame = -2

Query: 292 ITDLQFIGKQYTWWKGSQSPTIAKKLDRVLVNAAWLGVFSESHAEFLPRGLSDHSPATVS 113
           +TDL F G  +TWW       +AKKLDR+LVN  W   F  S   F     SDHS   +S
Sbjct: 75  LTDLSFRGNTFTWWNKRSRAPVAKKLDRILVNDKWTTTFPSSLGLFGEPDFSDHSSCELS 134

Query: 112 LGVARPRLHKPFQVFQRLIDDPKFLAVVSTAW 17
           L  A PR  KPF+    L+ D  FL+++   W
Sbjct: 135 LMSASPRSKKPFRFNNFLLKDENFLSLICLKW 166


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/100 (38%), Positives = 52/100 (52%)
 Frame = -2

Query: 307 INKLGITDLQFIGKQYTWWKGSQSPTIAKKLDRVLVNAAWLGVFSESHAEFLPRGLSDHS 128
           I +  + DL++ G  YTW        I +KLDRVLVN  W   F  S A FLP G+SDHS
Sbjct: 693 IREAKVDDLRYSGMHYTWSNQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHS 752

Query: 127 PATVSLGVARPRLHKPFQVFQRLIDDPKFLAVVSTAWQDS 8
           P  V +      + KPF+ F   +D  +F+ +V   W  +
Sbjct: 753 PMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLVKKVWDQN 792


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/92 (36%), Positives = 54/92 (58%)
 Frame = -2

Query: 292 ITDLQFIGKQYTWWKGSQSPTIAKKLDRVLVNAAWLGVFSESHAEFLPRGLSDHSPATVS 113
           ++DL + G  +TWW  S++  +AKK+DR+LVN +W  +F  S   F P   SDH+   V 
Sbjct: 170 LSDLVYKGSSFTWWNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPDFSDHASCGVV 229

Query: 112 LGVARPRLHKPFQVFQRLIDDPKFLAVVSTAW 17
           L +   +  +PF+ F  L+ +P+FL +V   W
Sbjct: 230 LELDPIKAKRPFKFFNFLLKNPEFLNLVWDVW 261


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/92 (36%), Positives = 51/92 (55%)
 Frame = -2

Query: 292 ITDLQFIGKQYTWWKGSQSPTIAKKLDRVLVNAAWLGVFSESHAEFLPRGLSDHSPATVS 113
           I+DL F G  YTWW   ++  IAKK+DR+LVN +WL     S+  F     SDH P+ V+
Sbjct: 176 ISDLPFRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVN 235

Query: 112 LGVARPRLHKPFQVFQRLIDDPKFLAVVSTAW 17
           +       +KPF++   L+  P+F+  +   W
Sbjct: 236 ISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTW 267


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/100 (38%), Positives = 51/100 (51%)
 Frame = -2

Query: 307 INKLGITDLQFIGKQYTWWKGSQSPTIAKKLDRVLVNAAWLGVFSESHAEFLPRGLSDHS 128
           I +  + DL++ G  YTW        I +KLDRVLVN  W   F  S A FLP G+SDHS
Sbjct: 546 IREAKVDDLRYSGMHYTWSNQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHS 605

Query: 127 PATVSLGVARPRLHKPFQVFQRLIDDPKFLAVVSTAWQDS 8
           P  V +        KPF+ F   +D  +F+ +V   W  +
Sbjct: 606 PMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQN 645