BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027465
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   152   7e-35
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   149   1e-33
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   144   3e-32
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   144   3e-32
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...   134   2e-29

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  152 bits (385), Expect = 7e-35
 Identities = 96/292 (32%), Positives = 148/292 (50%), Gaps = 6/292 (2%)
 Frame = +1

Query: 1   WDSSFWNVHVESASSQHITASVQCLYANKSFMLSAIYAFNEYVQRRNLWNDXXXXXXXXX 180
           WD +   V V S S Q I+ +V+  + +  F+++ +YA N    RR LW++         
Sbjct: 74  WDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELELLAANQT 132

Query: 181 XXXXEPPWCMLGDFNSIIDTDESSNG--RLTPGASELRDFMANRGLTDLSGAGAFFTWWN 354
               + PW +LGDFN  +D  ++S G  R+T G  E R+ +    ++DL   G  +TWWN
Sbjct: 133 TS--DKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTWWN 190

Query: 355 SNETDPLFRKLDRAIVNGLWHTVFSNSYVNFRPRGLSDHSPVDVSLGIALAQRHKPFQVF 534
           + E +P+ +K+DR +VN  W      SY +F     SDH P  V++      R+KPF++ 
Sbjct: 191 NQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLS 250

Query: 535 NHLLHHPSFLQEIAKAWSSNVW-GSDWYVLTTKLKIAKSALKNMNTQ-VGNLHSAVQRAR 708
           N L+HHP F+++I   W    + GS  + L+ K K  K  ++  N +    L   V +A 
Sbjct: 251 NFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAA 310

Query: 709 DDLLSFQQTMTTSPS--YAELQHEASLVTCLNEAYRMEEHLLRQKSRVHWLR 858
            +L + Q  +  +PS   A L+ EA       E    EE  L QKSRV WL+
Sbjct: 311 QNLKTCQNNLLAAPSSYLAGLEKEAH--RSWAELALAEERFLCQKSRVLWLK 360


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  149 bits (375), Expect = 1e-33
 Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 5/289 (1%)
 Frame = +1

Query: 1   WDSSFWNVHVESASSQHITASVQCLYANKSFMLSAIYAFNEYVQRRNLWNDXXXXXXXXX 180
           WD S   V + + S Q IT  V    +    ++S +YA NE  +R+ LW +         
Sbjct: 67  WDPSV-EVVIVAKSLQMITCEVLFPNSRTWIVISVVYAANEDDKRKELWREITALVASPV 125

Query: 181 XXXXEPPWCMLGDFNSIIDTDESSNGRLTPGASELRDF---MANRGLTDLSGAGAFFTWW 351
                 PW +LGDFN ++   E S          +RDF   + +  L+DL   G+ FTWW
Sbjct: 126 TFNR--PWILLGDFNQVLHPHEHSRHVSLNVDRRIRDFRECLLDAELSDLVYKGSSFTWW 183

Query: 352 NSNETDPLFRKLDRAIVNGLWHTVFSNSYVNFRPRGLSDHSPVDVSLGIALAQRHKPFQV 531
           N ++T P+ +K+DR +VN  W  +F +S+  F P   SDH+   V L +   +  +PF+ 
Sbjct: 184 NKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPDFSDHASCGVVLELDPIKAKRPFKF 243

Query: 532 FNHLLHHPSFLQEIAKAW-SSNVWGSDWYVLTTKLKIAKSALKNMN-TQVGNLHSAVQRA 705
           FN LL +P FL  +   W S+NV GS  + ++ KLK  K  +K+ +     NL    + A
Sbjct: 244 FNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSNLEKRTEEA 303

Query: 706 RDDLLSFQQTMTTSPSYAELQHEASLVTCLNEAYRMEEHLLRQKSRVHW 852
            + LLSFQ     +PS     HE             EE   RQ+SRV W
Sbjct: 304 HETLLSFQNLTLDNPSLENAAHELEAQRKWQILATAEESFFRQRSRVTW 352


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  144 bits (363), Expect = 3e-32
 Identities = 93/287 (32%), Positives = 138/287 (48%), Gaps = 2/287 (0%)
 Frame = +1

Query: 1   WDSSFWNVHVESASSQHITASVQCLYANKSFMLSAIYAFNEYVQRRNLWNDXXXXXXXXX 180
           WD S   V V   S Q IT  +    +   F++S +YA NE   R+ LWN+         
Sbjct: 75  WDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNELVQLALSPV 133

Query: 181 XXXXEPPWCMLGDFNSIIDTDESSNGRLTPGASELRDFMANRGLTDLSGAGAFFTWWNSN 360
                  W +LGDFN I++ + + N  +       R  + +  L DL   G+ +TWWN  
Sbjct: 134 VVGRS--WIVLGDFNQILNPESAINANIGRKIRAFRSCLLDSDLYDLVYKGSSYTWWNKC 191

Query: 361 ETDPLFRKLDRAIVNGLWHTVFSNSYVNFRPRGLSDHSPVDVSLGIALAQRHKPFQVFNH 540
            + PL +K+DR +VN  W+T+F ++Y NF     SDHS  +V L  A+ +  +PF+ FN+
Sbjct: 192 SSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAKRPFRFFNY 251

Query: 541 LLHHPSFLQEIAKAW-SSNVWGSDWYVLTTKLKIAKSALKNMNTQ-VGNLHSAVQRARDD 714
            LH+P FLQ I + W S NV GS  Y ++ KLK  K  +   + +   ++   V  A   
Sbjct: 252 FLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHAI 311

Query: 715 LLSFQQTMTTSPSYAELQHEASLVTCLNEAYRMEEHLLRQKSRVHWL 855
           +L  Q+   T+PS      E           + EE    QKS + WL
Sbjct: 312 VLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQKSSISWL 358


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  144 bits (363), Expect = 3e-32
 Identities = 93/287 (32%), Positives = 138/287 (48%), Gaps = 2/287 (0%)
 Frame = +1

Query: 1   WDSSFWNVHVESASSQHITASVQCLYANKSFMLSAIYAFNEYVQRRNLWNDXXXXXXXXX 180
           WD S   V V   S Q IT  +    +   F++S +YA NE   R+ LWN+         
Sbjct: 75  WDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASNEEGTRKELWNELVQLALSPV 133

Query: 181 XXXXEPPWCMLGDFNSIIDTDESSNGRLTPGASELRDFMANRGLTDLSGAGAFFTWWNSN 360
                  W +LGDFN I++ + + N  +       R  + +  L DL   G+ +TWWN  
Sbjct: 134 VVGRS--WIVLGDFNQILNPESAINANIGRKIRAFRSCLLDSDLYDLVYKGSSYTWWNKC 191

Query: 361 ETDPLFRKLDRAIVNGLWHTVFSNSYVNFRPRGLSDHSPVDVSLGIALAQRHKPFQVFNH 540
            + PL +K+DR +VN  W+T+F ++Y NF     SDHS  +V L  A+ +  +PF+ FN+
Sbjct: 192 SSRPLAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAKRPFRFFNY 251

Query: 541 LLHHPSFLQEIAKAW-SSNVWGSDWYVLTTKLKIAKSALKNMNTQ-VGNLHSAVQRARDD 714
            LH+P FLQ I + W S NV GS  Y ++ KLK  K  +   + +   ++   V  A   
Sbjct: 252 FLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRENYSDIEKRVSEAHAI 311

Query: 715 LLSFQQTMTTSPSYAELQHEASLVTCLNEAYRMEEHLLRQKSRVHWL 855
           +L  Q+   T+PS      E           + EE    QKS + WL
Sbjct: 312 VLHRQRITLTNPSVVHATLELEATRKWQILAKAEESFFCQKSSISWL 358


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score =  134 bits (338), Expect = 2e-29
 Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 6/291 (2%)
 Frame = +1

Query: 1   WDSSFWNVHVESASSQHITASVQCLYANKSFMLSAIYAFNEYVQRRNLWNDXXXXXXXXX 180
           WD S  +V V   + Q +  S++     +SF ++ +Y  N  + RR+LW D         
Sbjct: 73  WDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDILVLSRTSP 131

Query: 181 XXXXEPPWCMLGDFNSIIDTDE--SSNGRLTP--GASELRDFMANRGLTDLSGAGAFFTW 348
                 PW +LGDFN I    E  S N  L    G  +L+  + +  L+DL   G FFTW
Sbjct: 132 LSVT--PWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTW 189

Query: 349 WNSNETDPLFRKLDRAIVNGLWHTVFSNSYVNFRPRGLSDHSPVDVSLGIALAQRHKPFQ 528
            N  + +P+ RKLDRA+ NG W  VF ++   F P G SDH+P  + +        K F+
Sbjct: 190 SNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKSFK 249

Query: 529 VFNHLLHHPSFLQEIAKAWSSN-VWGSDWYVLTTKLKIAKSALKNMN-TQVGNLHSAVQR 702
            F+ L  HPS+L  ++ AW +N + GS  + L   LK+AK   + +N  +  N+     +
Sbjct: 250 YFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRTAQ 309

Query: 703 ARDDLLSFQQTMTTSPSYAELQHEASLVTCLNEAYRMEEHLLRQKSRVHWL 855
           +   L   Q  + TSPS    + E              E   RQKSR+ WL
Sbjct: 310 SLTRLEDIQVELLTSPSDTLFRREHVARKQWIFFAAALESFFRQKSRIRWL 360