BLASTX nr result

ID: Bupleurum21_contig00027463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027463
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270693.2| PREDICTED: uncharacterized protein LOC100261...   102   3e-20
ref|XP_002524705.1| ATP binding protein, putative [Ricinus commu...   100   1e-19
emb|CAN65141.1| hypothetical protein VITISV_034615 [Vitis vinifera]    99   3e-19
ref|XP_002305645.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-15
ref|XP_002872737.1| hypothetical protein ARALYDRAFT_490165 [Arab...    78   7e-13

>ref|XP_002270693.2| PREDICTED: uncharacterized protein LOC100261837 [Vitis vinifera]
          Length = 428

 Score =  102 bits (255), Expect = 3e-20
 Identities = 61/153 (39%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
 Frame = +1

Query: 4   ETVDPKFIQQQQPGENQMWHYGPGGVQYQNPGVQNMPMYYHPGSVPPPGNMGVQQVPMQA 183
           + ++P   Q      N MWHY      Y    V  +P+YY PG VPP GNM VQ VP++A
Sbjct: 274 DVIEPAIPQSGGYAGNPMWHYNNPDSHYPGQPVHQIPVYYVPGPVPP-GNMPVQSVPVRA 332

Query: 184 QYVQRYAAGHNHIPVGIHQQVPGMGQVYARE-RTVNPYDQIRRTPGGVNXXXXXXVYYEV 360
           QYV +Y      IPVG     PGMGQVY    R V P +        V+      VYY V
Sbjct: 333 QYVPQYPGPPGQIPVGFRHPGPGMGQVYGGAIRAVGPMEGYDMPMRVVSDGMNQQVYYGV 392

Query: 361 GNAGAIPMY-SRMVGPGGEEIQAPVNEPNPGRI 456
             AG +  Y   MV P GEE Q   ++  PGR+
Sbjct: 393 RTAGMVQAYPPGMVVPAGEEFQGNGSDKKPGRV 425


>ref|XP_002524705.1| ATP binding protein, putative [Ricinus communis]
           gi|223536066|gb|EEF37724.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 417

 Score =  100 bits (249), Expect = 1e-19
 Identities = 64/147 (43%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
 Frame = +1

Query: 40  PGENQMWHYGPGGVQYQNPGVQNMPMYYHPGSVPPPGNMGVQQVPMQAQYVQRYAAGHNH 219
           PG N + HY P    Y    VQ +P+YY PGSVPPPGN+ V   P   QYVQ+Y      
Sbjct: 280 PG-NPVMHYIPNP-HYPGHTVQQIPVYYVPGSVPPPGNVPVHIRP---QYVQQYPVSTGQ 334

Query: 220 IPVGIHQQVPGMGQVYA----RERT--VNPYDQIRRTPGGVNXXXXXXVYYEVGNAGAIP 381
           +P+G H Q+PGMGQ+Y     R  T  ++PYD  R    GVN      VYY V N   +P
Sbjct: 335 MPIGYHPQLPGMGQIYGGAGMRPMTAGMDPYDGGRVVSDGVN----QQVYYGVRN--MVP 388

Query: 382 MYSRMVGPGGEEIQAPVNEPNPGRILQ 462
            Y  M  PGGEE+Q   ++   GR+ Q
Sbjct: 389 GYPGMAMPGGEELQRTASDTKQGRVSQ 415


>emb|CAN65141.1| hypothetical protein VITISV_034615 [Vitis vinifera]
          Length = 540

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 60/153 (39%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
 Frame = +1

Query: 4   ETVDPKFIQQQQPGENQMWHYGPGGVQYQNPGVQNMPMYYHPGSVPPPGNMGVQQVPMQA 183
           + ++P   Q      N MWHY P    Y    V  +P+YY PG VPP GNM VQ VP++ 
Sbjct: 387 DVIEPAVPQSGGYAGNPMWHYNPDS-HYPGQPVHQIPVYYVPGPVPP-GNMPVQSVPVRP 444

Query: 184 QYVQRYAAGHNHIPVGIHQQVPGMGQVYARE-RTVNPYDQIRRTPGGVNXXXXXXVYYEV 360
           QYV +Y      IPVG     PGMGQVY    R V P +        V+      VYY V
Sbjct: 445 QYVPQYPGPPGQIPVGFRHPGPGMGQVYGGAIRAVGPMEGYDMPMRVVSDGMNQQVYYGV 504

Query: 361 GNAGAIPMY-SRMVGPGGEEIQAPVNEPNPGRI 456
              G +  Y   MV P GEE Q   ++  PGR+
Sbjct: 505 RTTGMVQAYPPGMVVPAGEEFQGNGSDKKPGRV 537


>ref|XP_002305645.1| predicted protein [Populus trichocarpa] gi|222848609|gb|EEE86156.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
 Frame = +1

Query: 40  PGENQMWHYGPGGVQYQNPGVQNMPMYYHPGSVPPPGNMGVQQVPMQAQYVQRYAAGHNH 219
           PG N + HY P    Y    VQ MP+YY  G++PP GN     V +++ Y Q+Y      
Sbjct: 285 PG-NPVMHYIPDS-HYSGAPVQQMPVYYVQGTIPP-GN-----VQIRSPYAQQYPIATGQ 336

Query: 220 IPVGIHQQVPGMGQVYA-----RERTVNPYDQIRRTPGGVNXXXXXXVYYEVGNA--GAI 378
           +P+  HQ V GMGQVY+         ++PYD  R    GVN       YY V NA  G +
Sbjct: 337 MPIRYHQAVQGMGQVYSGMTMRPVAAMDPYDGARVVSDGVN----QQFYYGVRNASTGMV 392

Query: 379 PMYSRMVGPGGEEIQAPVNEPNPGRILQ 462
             Y  MV PGGE+++   ++ NPGR+ Q
Sbjct: 393 QGYPGMVIPGGEDMKRTASDVNPGRVSQ 420


>ref|XP_002872737.1| hypothetical protein ARALYDRAFT_490165 [Arabidopsis lyrata subsp.
           lyrata] gi|297318574|gb|EFH48996.1| hypothetical protein
           ARALYDRAFT_490165 [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 62/166 (37%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
 Frame = +1

Query: 25  IQQQQPGENQMWHYGPGG---VQYQNPGVQNMPMYYHPGSVP------------PPGNMG 159
           IQQ     N  W Y PG    V YQ   +   P+YY PGSVP             PGN  
Sbjct: 291 IQQSNLPVNSQWQYAPGPGPQVHYQGHTIHQSPVYYVPGSVPGNHMVQQGNHMVQPGNHM 350

Query: 160 VQQVPMQAQYVQRYAAGHNHIPVGIHQ----QVPGMGQVYARERTVNPYDQIRRTPGGVN 327
           VQ V MQ QY+Q+Y    +H+P+G HQ    Q+ G GQVY    TV P   +     G+N
Sbjct: 351 VQPVQMQGQYLQQY----HHVPMGYHQPQTHQMAGPGQVYG--GTVRP---VMMAVDGMN 401

Query: 328 XXXXXXVYYEVGNAGAIPMYSR---MVGPGGEEIQ-APVNEPNPGR 453
                  YY +   G + MY     MV PG EE Q     + +PGR
Sbjct: 402 RTG----YYGMKTPGPVQMYHHHPGMVVPGVEEQQYRTETDSDPGR 443


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