BLASTX nr result

ID: Bupleurum21_contig00027440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027440
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein...    69   4e-10
ref|XP_003556648.1| PREDICTED: uncharacterized protein LOC100820...    68   9e-10
ref|XP_003529409.1| PREDICTED: uncharacterized protein LOC100305...    65   6e-09
ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arab...    65   6e-09
ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|2462821|gb|AAB72156.1| hypothetical protein
           [Arabidopsis thaliana] gi|2829906|gb|AAC00614.1|
           Hypothetical protein [Arabidopsis thaliana]
           gi|38454056|gb|AAR20722.1| At1g23050 [Arabidopsis
           thaliana] gi|38603998|gb|AAR24742.1| At1g23050
           [Arabidopsis thaliana] gi|332192206|gb|AEE30327.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 161

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
 Frame = +3

Query: 69  YQPPSGVLPNYPSPPF-----NVNGVITPPAPNSIVPWFPYYSKKPPHATDDQSSST 224
           Y PP G +PNYPSPP+     + +    PP PN+I+P+FPYY +KPPH TD  SSS+
Sbjct: 74  YPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKPPHQTDQTSSSS 130


>ref|XP_003556648.1| PREDICTED: uncharacterized protein LOC100820386 [Glycine max]
          Length = 160

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
 Frame = +3

Query: 66  IYQPPSGVLPNYPSPPFNVNGVI-----------TPPAPNSIVPWFPYYSKKPPHATDDQ 212
           +Y PPSG  P YP+PPF   GV            TPP P+ I+P+FP+Y +KPPH  +D 
Sbjct: 72  LYPPPSGNYPYYPTPPFGGGGVGGNDGSGGGGFGTPPPPDPILPYFPFYYRKPPHKPEDN 131

Query: 213 S-SSTSLFKRTAVIRSTHFL 269
           S S+T++ K T ++  T  L
Sbjct: 132 SASTTTMHKWTGMVAITSLL 151


>ref|XP_003529409.1| PREDICTED: uncharacterized protein LOC100305848 [Glycine max]
          Length = 163

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 15/83 (18%)
 Frame = +3

Query: 66  IYQPPSGVLPNYPSPPFNVNGVI--------------TPPAPNSIVPWFPYYSKKPPHAT 203
           +Y PPSG  P YP+PP+   G +              +PP P+ I+P+FP+Y +KPPH  
Sbjct: 72  LYPPPSGNYPYYPTPPYGGGGGVGSNDGSGSGSGGFGSPPPPDPILPYFPFYYRKPPHKP 131

Query: 204 DDQS-SSTSLFKRTAVIRSTHFL 269
           +D S S+T+++K T ++  T  L
Sbjct: 132 EDNSASTTTMYKWTGMVGITSLL 154


>ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arabidopsis lyrata subsp.
           lyrata] gi|297336395|gb|EFH66812.1| hypothetical protein
           ARALYDRAFT_472555 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
 Frame = +3

Query: 69  YQPPSGVLPNYPSPPF-----NVNGVITPPAPNSIVPWFPYYSKKPPHATDDQSSST 224
           Y PP G +P+YPSPP+     + +    PP P++I+P+FPYY +KPPH TD  SSS+
Sbjct: 74  YPPPVGNIPDYPSPPYGGGDGSGSNFYGPPPPDAILPYFPYYYRKPPHQTDQTSSSS 130


>ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|222864924|gb|EEF02055.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
 Frame = +3

Query: 66  IYQPPSGVLPNYPSPPF--NVNGVITPPAPNSIVPWFPYYSKKPPHATDDQSSSTSLFKR 239
           +Y  P+G LP Y  PPF  N NG   PP P+ I+P+FP+Y +KPPH  DD SS+TSL + 
Sbjct: 66  LYPSPTGNLPYYYPPPFGNNFNG---PPPPDPILPYFPFYYRKPPH-QDDVSSATSLPRS 121

Query: 240 TAVIRSTHFLPLLYFSFLF 296
           T ++ +++   ++ F+FL+
Sbjct: 122 TLMMGTSN---IIAFAFLY 137


Top