BLASTX nr result

ID: Bupleurum21_contig00027439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027439
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein...    94   9e-18
ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arab...    89   4e-16
ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002888810.1| hypothetical protein ARALYDRAFT_476228 [Arab...    88   6e-16
ref|XP_003556648.1| PREDICTED: uncharacterized protein LOC100820...    84   1e-14

>ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|2462821|gb|AAB72156.1| hypothetical protein
           [Arabidopsis thaliana] gi|2829906|gb|AAC00614.1|
           Hypothetical protein [Arabidopsis thaliana]
           gi|38454056|gb|AAR20722.1| At1g23050 [Arabidopsis
           thaliana] gi|38603998|gb|AAR24742.1| At1g23050
           [Arabidopsis thaliana] gi|332192206|gb|AEE30327.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 161

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
 Frame = +3

Query: 42  NTIQLTFFFVSIIFMISC---PATLSSQNECPYPCYPSPPAGSGN----------YXXXX 182
           NT      F+++IF+ S    P  + S   CPYPCYP+PP G G+          Y    
Sbjct: 2   NTNDHGLLFLTLIFVFSLVYFPYLVISDTPCPYPCYPTPPIGGGSSTPSMTQPPPYPPPG 61

Query: 183 XXXXXXXXGSSIYQPPSGVLPNYPSPPF-----NVNGVITPPAPNTIVPWFPYYSKKPPH 347
                       Y PP G +PNYPSPP+     + +    PP PN I+P+FPYY +KPPH
Sbjct: 62  VNYPTPAGNLPNYPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKPPH 121

Query: 348 ATDDQSSST 374
            TD  SSS+
Sbjct: 122 QTDQTSSSS 130


>ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arabidopsis lyrata subsp.
           lyrata] gi|297336395|gb|EFH66812.1| hypothetical protein
           ARALYDRAFT_472555 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
 Frame = +3

Query: 60  FFFVSIIFMISCPATLSSQNECPYPCYPSPPAGSGN----------YXXXXXXXXXXXXG 209
           FF  S+++    P    S+  CPYPCYP+PP G G+          Y             
Sbjct: 14  FFIFSLVYF---PYLAISETPCPYPCYPTPPIGGGSSTPSMTQPPPYPPPAVNYPSPAGN 70

Query: 210 SSIYQPPSGVLPNYPSPPF-----NVNGVITPPAPNTIVPWFPYYSKKPPHATDDQSSST 374
              Y PP G +P+YPSPP+     + +    PP P+ I+P+FPYY +KPPH TD  SSS+
Sbjct: 71  LPNYPPPVGNIPDYPSPPYGGGDGSGSNFYGPPPPDAILPYFPYYYRKPPHQTDQTSSSS 130


>ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|222864924|gb|EEF02055.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
 Frame = +3

Query: 63  FFVSIIFMISCPA-TLSSQNECPYPCYPSPPAGSGNYXXXXXXXXXXXXGSS----IYQP 227
           FF SI+  ++ P+ T S   ECPYPCYP PP G+G                +    +Y  
Sbjct: 13  FFTSIL--VNLPSLTTSDSGECPYPCYP-PPTGTGTPIVTTPPSPPSQSAGTFSPPLYPS 69

Query: 228 PSGVLPNYPSPPF--NVNGVITPPAPNTIVPWFPYYSKKPPHATDDQSSSTSLFKRTALI 401
           P+G LP Y  PPF  N NG   PP P+ I+P+FP+Y +KPPH  DD SS+TSL + T ++
Sbjct: 70  PTGNLPYYYPPPFGNNFNG---PPPPDPILPYFPFYYRKPPH-QDDVSSATSLPRSTLMM 125

Query: 402 QSPLIF---FLY-FFSC 440
            +  I    FLY FF C
Sbjct: 126 GTSNIIAFAFLYLFFGC 142


>ref|XP_002888810.1| hypothetical protein ARALYDRAFT_476228 [Arabidopsis lyrata subsp.
           lyrata] gi|297334651|gb|EFH65069.1| hypothetical protein
           ARALYDRAFT_476228 [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
 Frame = +3

Query: 75  IIFMISCPATLSSQNECPYPCYPSPPAGSGNYXXXXXXXXXXXXGSSIYQPPSGV-LPNY 251
           + ++++ P    SQ  CPYPCYP P AG+G+              +  Y PPS   +PNY
Sbjct: 14  VFYLVNFPFITISQTPCPYPCYPPPIAGTGSTQPAGYYPQP----TGYYPPPSSSNVPNY 69

Query: 252 PSPPFNVN----GVITPPAPNTIVPWFPYYSKKPPHATDDQSSSTSLFKRTALIQSPLIF 419
           PSPP+       G   PP P+ I+P+FP+Y +KPPH TD  SSS     +   + + L  
Sbjct: 70  PSPPYYGGSPGGGYNGPPPPDPILPYFPFYYRKPPHQTDQSSSSVKSTVKIVTVAN-LFA 128

Query: 420 FLYFFS 437
            L FFS
Sbjct: 129 VLMFFS 134


>ref|XP_003556648.1| PREDICTED: uncharacterized protein LOC100820386 [Glycine max]
          Length = 160

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/151 (35%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
 Frame = +3

Query: 45  TIQLTFFFVSIIFMISCPATLSSQNE-CPYPCYPSP--------PAGSGNYXXXXXXXXX 197
           T   T   +SII ++  P T  S N  CPYPCYP P        P+G             
Sbjct: 13  TTSTTLILLSII-LLCFPTTSKSDNPPCPYPCYPPPIGTVTPTTPSGGSTVPPAPPQPGL 71

Query: 198 XXXGSSIYQPPSGVLPNYPSPPFNVNGVI-----------TPPAPNTIVPWFPYYSKKPP 344
                 +Y PPSG  P YP+PPF   GV            TPP P+ I+P+FP+Y +KPP
Sbjct: 72  ------LYPPPSGNYPYYPTPPFGGGGVGGNDGSGGGGFGTPPPPDPILPYFPFYYRKPP 125

Query: 345 HATDDQSSSTSLFKR-------TALIQSPLI 416
           H  +D S+ST+   +       T+L+ S L+
Sbjct: 126 HKPEDNSASTTTMHKWTGMVAITSLLSSSLL 156


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