BLASTX nr result

ID: Bupleurum21_contig00027436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027436
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicu...    84   9e-15
ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...    80   2e-13
emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]    80   2e-13
ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Gly...    68   9e-10
ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Gly...    66   3e-09

>ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
           gi|85069279|gb|ABC69711.1| auxin response factor 2
           [Solanum lycopersicum]
          Length = 846

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
 Frame = +2

Query: 29  RPDARYGNHNNDLIQPGHM--DYQHQVLMPPPVPYYHQMPVHS-SVMPKSSPIGH-QVLK 196
           R DARY  +    + PGH   + Q   +MP PV  Y Q+  HS  +M K S +   + +K
Sbjct: 566 RGDARYSGYGEFSVLPGHRVANQQGSWIMPQPVSPYMQLSSHSREMMHKPSVVKQPEAVK 625

Query: 197 PKVGNCKLFGIPLISSTVTTEPLVAQRNSITEAAGDMHLGLHP--SLICESDNWSEQLKG 370
           PK GN KLFGIPL +S V T+ ++ +++S+ + A DM++G+HP  SL  +SD  SEQ KG
Sbjct: 626 PKEGNYKLFGIPL-TSNVCTDAVMMRKSSLIDPASDMNIGIHPHQSLATDSDQRSEQSKG 684

Query: 371 AK 376
           +K
Sbjct: 685 SK 686


>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
           gi|297734502|emb|CBI15749.3| unnamed protein product
           [Vitis vinifera]
          Length = 862

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
 Frame = +2

Query: 26  TRPDARYGNHNNDLIQPGHMD--YQHQVLMPPPVPYYHQMPVHS-SVMPKSSPIGHQ-VL 193
           TR DAR+G  +      GH     Q   LMPPP   + +   HS  +MPK   +  Q  +
Sbjct: 584 TRGDARFGGFSEYPTLHGHRVELQQGNWLMPPPAQSHFENFAHSRELMPKPILVQKQEAV 643

Query: 194 KPKVGNCKLFGIPLISSTVTTEPLVAQRNSITEAAGDMHLGLHPSLICESDNWSEQLKGA 373
           KPK GNCKLFGIPLI + V +EP ++ R+   E AG +HL   PS   +SD  SEQ KGA
Sbjct: 644 KPKDGNCKLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLA--PSAF-DSDQKSEQSKGA 700

Query: 374 K 376
           K
Sbjct: 701 K 701


>emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
 Frame = +2

Query: 26  TRPDARYGNHNNDLIQPGHMD--YQHQVLMPPPVPYYHQMPVHS-SVMPKSSPIGHQ-VL 193
           TR DAR+G  +      GH     Q   LMPPP   + +   HS  +MPK   +  Q  +
Sbjct: 584 TRGDARFGGFSEYPTLHGHRVELQQGNWLMPPPAQSHFENFAHSRELMPKPILVQKQEAV 643

Query: 194 KPKVGNCKLFGIPLISSTVTTEPLVAQRNSITEAAGDMHLGLHPSLICESDNWSEQLKGA 373
           KPK GNCKLFGIPLI + V +EP ++ R+   E AG +HL   PS   +SD  SEQ KGA
Sbjct: 644 KPKDGNCKLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLA--PSAF-DSDQKSEQSKGA 700

Query: 374 K 376
           K
Sbjct: 701 K 701


>ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
 Frame = +2

Query: 17  AFITRPDARYGNHNNDLIQPGHM--DYQHQVLMPPPVPY-YHQMPVHSSVMPKS-SPIGH 184
           +F  R + R+          GH   D    ++ PPP P   +Q P    +M K  S    
Sbjct: 557 SFQARGNLRFSAFGEYPALHGHKVEDSHGNLMPPPPAPQTQYQSPCSRELMSKHVSAKTC 616

Query: 185 QVLKPKVGNCKLFGIPLISSTVTTEPLVAQRNSITEAAGDMHLGLHPSLICESDNWSEQL 364
           + +KPK G+CKLFG  LIS  +  EP ++QRN ++E AG MHL  H     E+D  S+  
Sbjct: 617 EAVKPKDGDCKLFGFSLISGPIVPEPSLSQRN-VSEPAGQMHLTAHQQRTSENDEKSDHS 675

Query: 365 KGAK 376
           KG++
Sbjct: 676 KGSR 679


>ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +2

Query: 77  GH-MDYQH-QVLMPPPVPYYHQMPVHSSVMPKSSPIGH---QVLKPKVGNCKLFGIPLIS 241
           GH +++ H   LMPPP    ++ P    ++PK  PI     +V KPK  +CKLFGI L+S
Sbjct: 597 GHKVEHSHGNFLMPPPPSTPYESPRSRELLPK--PISGKPCEVSKPKDSDCKLFGISLLS 654

Query: 242 STVTTEPLVAQRNSITEAAGDMHLGLHPSLICESDNWSEQLKG 370
           S +  EP V+QRN  +E  G MH   H     ++D  SE  +G
Sbjct: 655 SPIAPEPSVSQRNVPSEPVGHMHTTSHQQRAFDNDQKSEHSRG 697