BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027433
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     110   2e-22
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc...   100   1e-19
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                97   2e-18
gb|AAS98502.1| putative polyprotein [Oryza sativa Japonica Group]      96   2e-18
emb|CAD39994.3| OSJNBb0045P24.11 [Oryza sativa Japonica Group]         96   2e-18

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/131 (45%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
 Frame = +2

Query: 2    SRLASSDEKFLDGSIYLKTLHQSSIQRTEVNLIGQIK---NWMTPIRNYLEKDILPPDRV 172
            S+L SS  K +  ++ +   +  SI  T V ++G I+    WMTPI  Y     LP DR 
Sbjct: 857  SKLTSSTIKNVSRTVLVDIRNAKSITET-VGMVGDIEAETTWMTPIMKYKLTKGLPEDRS 915

Query: 173  EAKKIKHRAANYTVVGGLLYRRSAVQPLLRCATPEEARLILEEVHEGVCADHLAGKALAL 352
             ++KIK  AA Y V  G LYRRS ++PLL+C  P +A LIL E+H+G+C  H+  + LA 
Sbjct: 916  LSQKIKRIAARYLVFEGELYRRSVIRPLLKCVGPADAGLILTEIHDGICGHHMGARTLAD 975

Query: 353  KILRQGYFWPT 385
            K LR GYFWPT
Sbjct: 976  KALRAGYFWPT 986


>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1767

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
 Frame = +2

Query: 44   IYLKTLHQSSI--QRTEVNLIGQIK------NWMTPIRNYLEKDILPPDRVEAKKIKHRA 199
            I+ + LH  S+    +EV  I Q K      +W TP+  +LE   LP D  EAK+++HRA
Sbjct: 1330 IFFEVLHAPSVPMDSSEVMTIDQEKLGEDPYDWRTPLVKHLETGWLPVDEAEAKRLQHRA 1389

Query: 200  ANYTVVGGLLYRRSAVQPLLRCATPEEARLILEEVHEGVCADHLAGKALALKILRQGYFW 379
              Y +V G LYR   +QPLLRC +  E   + +E+H+G+C  H A + +A K+ RQG +W
Sbjct: 1390 TKYKMVSGQLYRSGVLQPLLRCISFAEGEEMAKEIHQGLCGAHQAARTVASKVFRQGVYW 1449

Query: 380  PT 385
            PT
Sbjct: 1450 PT 1451


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/128 (39%), Positives = 71/128 (55%)
 Frame = +2

Query: 2    SRLASSDEKFLDGSIYLKTLHQSSIQRTEVNLIGQIKNWMTPIRNYLEKDILPPDRVEAK 181
            SRLA+  +K    S    TL + S+   E        NWMTPI+ YL   +  P     K
Sbjct: 1448 SRLATLKKKGAHRSAIHVTLAKPSVGTEECMATDTQPNWMTPIKQYLTDGVCDPHL--EK 1505

Query: 182  KIKHRAANYTVVGGLLYRRSAVQPLLRCATPEEARLILEEVHEGVCADHLAGKALALKIL 361
             +K +AA Y ++G  LYRR   +PLL+C  PE+   ++ E+HEG+C  H   + ++ KIL
Sbjct: 1506 TMKLQAARYILIGEDLYRRGYSRPLLKCLGPEQVTYVMTELHEGICGTHSGARTMSAKIL 1565

Query: 362  RQGYFWPT 385
            R GY+WPT
Sbjct: 1566 RAGYYWPT 1573


>gb|AAS98502.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1048

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
 Frame = +2

Query: 44   IYLKTLHQSSI--QRTEVNLIGQIK------NWMTPIRNYLEKDILPPDRVEAKKIKHRA 199
            I+ + LH  S+    TEV  I Q K      +W TP   +LE   LP D  EAK+++ +A
Sbjct: 665  IFFEVLHAPSVPMDSTEVMAIDQEKLGEDPYDWRTPFVKHLETGWLPVDEAEAKRLQLKA 724

Query: 200  ANYTVVGGLLYRRSAVQPLLRCATPEEARLILEEVHEGVCADHLAGKALALKILRQGYFW 379
              Y +V G LYR   +QPLLRC +  E   + +E+H+G+C  H A + +A K+ RQG +W
Sbjct: 725  TKYKMVSGQLYRSGVLQPLLRCISFAEGEQMAKEIHQGLCGAHQAARTVASKVFRQGVYW 784

Query: 380  PT 385
            PT
Sbjct: 785  PT 786


>emb|CAD39994.3| OSJNBb0045P24.11 [Oryza sativa Japonica Group]
          Length = 822

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
 Frame = +2

Query: 44  IYLKTLHQSSIQRT--EVNLIGQIK------NWMTPIRNYLEKDILPPDRVEAKKIKHRA 199
           I+ + L+  S+     EV  I Q+K      NW TP   +LE   LP D  EAK ++HRA
Sbjct: 440 IFFEVLYAPSVPTDILEVTTIDQVKLGEDPYNWRTPFVKHLETGWLPEDEAEAKCLQHRA 499

Query: 200 ANYTVVGGLLYRRSAVQPLLRCATPEEARLILEEVHEGVCADHLAGKALALKILRQGYFW 379
             Y +V G LY    +QPLLRC +  E   + +E+H+G+C  H   + +A K+ RQG +W
Sbjct: 500 TKYKMVSGQLYHSGVLQPLLRCISFAEGEEMAKEIHQGLCGAHQVARTVASKVFRQGVYW 559

Query: 380 PT 385
           PT
Sbjct: 560 PT 561