BLASTX nr result

ID: Bupleurum21_contig00027424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027424
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595449.1| G-box binding factor bZIP transcription fact...    62   4e-08
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    59   3e-07
ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago ...    58   7e-07
ref|XP_003615631.1| hypothetical protein MTR_5g070290 [Medicago ...    57   2e-06
gb|ABD65056.1| hypothetical protein 27.t00122 [Brassica oleracea]      56   3e-06

>ref|XP_003595449.1| G-box binding factor bZIP transcription factor [Medicago
           truncatula] gi|355484497|gb|AES65700.1| G-box binding
           factor bZIP transcription factor [Medicago truncatula]
          Length = 473

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
 Frame = -1

Query: 350 PNVYPMCNIDGENMIHVFFECNFASQFW--SHVNLSYDMREIKYAPDWLLSKLEVCLTDE 177
           P + P C    E   H F EC   S+ W  S +NL    + IK  P+ L+ K++    + 
Sbjct: 9   PPLCPRCYSKIETSTHAFMECPLVSRVWFGSSLNLKILDQRIKNFPERLIDKIQHAKPEV 68

Query: 176 IIRICTVLWGVWFSRNKRVWEDRVINPVLAMDGAFNSVSEWKKVRHVSNGE 24
           +I+I ++ + +W++RN  V++DR +  V  +  A+ S+S++++    ++ E
Sbjct: 69  LIQIVSITYYIWYARNLSVFKDRSLPEVEIIQRAYTSISDYRQANSTNSNE 119


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
 Frame = -1

Query: 350 PNVYPMCNIDGENMIHVFFECNFASQFWSHVNLSY----DMREIKYAPDWLLSKLEVCLT 183
           P+    C    E+  H+FF C  A   W+  N+ +     + +   APD + + L+    
Sbjct: 94  PSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSA 153

Query: 182 DEIIRICTVLWGVWFSRNKRVWEDRVINPVLAMDGAFNSVSEWKKVRH 39
            ++  I T++W +W SRN ++W+    + V  ++ A + +  W+K  H
Sbjct: 154 SQMESIVTIMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKANH 201


>ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago truncatula]
           gi|355515256|gb|AES96879.1| hypothetical protein
           MTR_5g042640 [Medicago truncatula]
          Length = 270

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
 Frame = -1

Query: 350 PNVYPMCNIDGENMIHVFFECNFASQFWSHVNLSYDMREI-------KYAPDWLLSKLEV 192
           P  +  C  + E+++HVFF+C FA Q W    L   ++           A  +LL  L V
Sbjct: 42  PTNWASCASNHEDLMHVFFDCPFAIQVWHRTGLWGSVQHALSITASATKAIFFLLENLSV 101

Query: 191 CLTDEIIRICTVLWGVWFSRNKRVWEDRVINPVLAMDGAFNSVSEW 54
            LT    R+ +V+W +W   N RVW+D        ++ A N V++W
Sbjct: 102 ELTQ---RLSSVIWSIWKHHNLRVWDDVTETSATVVERARNMVADW 144


>ref|XP_003615631.1| hypothetical protein MTR_5g070290 [Medicago truncatula]
           gi|355516966|gb|AES98589.1| hypothetical protein
           MTR_5g070290 [Medicago truncatula]
          Length = 307

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
 Frame = -1

Query: 317 ENMIHVFFECNFASQFWSHVNLSYDMR-EIKYAPDW------LLSKLEVCLTDEIIRICT 159
           E++ HVFFEC FA Q WS  +L  +++  +  +P        LL  L V L+    R+  
Sbjct: 42  EDLTHVFFECPFAVQVWSMASLWREVQGAVTSSPSAIEAIFALLQSLSVTLSQ---RLAA 98

Query: 158 VLWGVWFSRNKRVWEDRVINPVLAMDGAFNSVSEWKKVRHVSNG 27
           + W +W  RN +VWED        +D A +   EW    H++NG
Sbjct: 99  IFWSLWKHRNIKVWEDITETCATVVDRARSLTDEW----HLANG 138


>gb|ABD65056.1| hypothetical protein 27.t00122 [Brassica oleracea]
          Length = 239

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
 Frame = -1

Query: 338 PMCNIDGENMIHVFFECNFASQFWSHVNLSYDMREIKYAP-----DWLLSKL------EV 192
           P C    E + H+ FEC FA+Q WS   L  + RE+         D+LL ++      E 
Sbjct: 27  PRCGQHEETVNHMLFECPFATQTWSLETLPIEPRELPRPSIFDNFDYLLHRIHKRNGTEE 86

Query: 191 CLTDEIIRICTVLWGVWFSRNKRVWEDRVINPVLAMDGAFNSVSEWK 51
           CL     RI  +LW +W +RN++V+ ++ I+P+     A +  + W+
Sbjct: 87  CLA----RIPWILWFLWKARNEKVFNNKDISPLEVFQSAASEAASWR 129


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