BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027414
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27627.3| unnamed protein product [Vitis vinifera]              261   8e-68
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   261   8e-68
ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   246   1e-65
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   244   2e-65
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   247   1e-64

>emb|CBI27627.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  261 bits (668), Expect = 8e-68
 Identities = 123/147 (83%), Positives = 134/147 (91%), Gaps = 2/147 (1%)
 Frame = -2

Query: 710 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLPQCFPEVRKIFKD--NYP 537
           RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVT QSL Q FPE+RK+     N P
Sbjct: 224 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQTFPEIRKLLSGSANEP 283

Query: 536 KTCSFNDCLHIGEQGCIVEGDWERYPYYFQLYDEIKIREEYQLRTLGTKREGDVRYKTGD 357
           + CSFNDCLH+GE GC+V+GDWERYPYYFQL DEIKIREE+QLRTLGTKREGDVRYKTGD
Sbjct: 284 EKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRTLGTKREGDVRYKTGD 343

Query: 356 LGVKQAEPRLEPKKHRRVSRKKINQSV 276
           +GVKQAEPRLEPKKHRR SRK++NQS+
Sbjct: 344 MGVKQAEPRLEPKKHRRQSRKRMNQSI 370


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
           [Vitis vinifera]
          Length = 491

 Score =  261 bits (668), Expect = 8e-68
 Identities = 123/147 (83%), Positives = 134/147 (91%), Gaps = 2/147 (1%)
 Frame = -2

Query: 710 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLPQCFPEVRKIFKD--NYP 537
           RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVT QSL Q FPE+RK+     N P
Sbjct: 315 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQTFPEIRKLLSGSANEP 374

Query: 536 KTCSFNDCLHIGEQGCIVEGDWERYPYYFQLYDEIKIREEYQLRTLGTKREGDVRYKTGD 357
           + CSFNDCLH+GE GC+V+GDWERYPYYFQL DEIKIREE+QLRTLGTKREGDVRYKTGD
Sbjct: 375 EKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRTLGTKREGDVRYKTGD 434

Query: 356 LGVKQAEPRLEPKKHRRVSRKKINQSV 276
           +GVKQAEPRLEPKKHRR SRK++NQS+
Sbjct: 435 MGVKQAEPRLEPKKHRRQSRKRMNQSI 461


>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
           gi|223545980|gb|EEF47483.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 500

 Score =  246 bits (627), Expect(2) = 1e-65
 Identities = 114/145 (78%), Positives = 128/145 (88%)
 Frame = -2

Query: 710 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLPQCFPEVRKIFKDNYPKT 531
           RSGRGKHTTR+VSLLPLS GGYLADTPGFNQPSLLKVTKQSL + FPE++K+     P  
Sbjct: 326 RSGRGKHTTRNVSLLPLSAGGYLADTPGFNQPSLLKVTKQSLAETFPEIQKMLSSGGPAK 385

Query: 530 CSFNDCLHIGEQGCIVEGDWERYPYYFQLYDEIKIREEYQLRTLGTKREGDVRYKTGDLG 351
           CSFNDCLH+GE GCIV GDWERY +YFQL DEI+IREE+QLRT GTK+EGDVRYK GD+G
Sbjct: 386 CSFNDCLHLGEPGCIVNGDWERYSFYFQLLDEIRIREEFQLRTYGTKKEGDVRYKVGDMG 445

Query: 350 VKQAEPRLEPKKHRRVSRKKINQSV 276
           V+QAEPRLEPKKHRR SRK+INQS+
Sbjct: 446 VQQAEPRLEPKKHRRQSRKRINQSL 470



 Score = 30.4 bits (67), Expect(2) = 1e-65
 Identities = 11/20 (55%), Positives = 18/20 (90%)
 Frame = -3

Query: 196 ENLSDDDTDPILRAMRNEHR 137
           +NL D++ DPILRA++NE++
Sbjct: 481 DNLLDEENDPILRALKNENQ 500


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
           max]
          Length = 473

 Score =  244 bits (624), Expect(2) = 2e-65
 Identities = 115/145 (79%), Positives = 129/145 (88%)
 Frame = -2

Query: 710 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLPQCFPEVRKIFKDNYPKT 531
           RSGRGKHTTRHVSLLPLS GG+LADTPGFNQPSLLKVTKQSL Q FPE+RK+   +  + 
Sbjct: 301 RSGRGKHTTRHVSLLPLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSASEIEK 360

Query: 530 CSFNDCLHIGEQGCIVEGDWERYPYYFQLYDEIKIREEYQLRTLGTKREGDVRYKTGDLG 351
           CSFN+CLH+GE GCIV+GDWERY YYFQL DEI+IREE+QLRT GTKREGDVR K GD+G
Sbjct: 361 CSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMG 420

Query: 350 VKQAEPRLEPKKHRRVSRKKINQSV 276
           V+QAEPRLEPKKHRR SRK+INQS+
Sbjct: 421 VQQAEPRLEPKKHRRQSRKRINQSI 445



 Score = 31.2 bits (69), Expect(2) = 2e-65
 Identities = 12/19 (63%), Positives = 17/19 (89%)
 Frame = -3

Query: 196 ENLSDDDTDPILRAMRNEH 140
           +NL D++ DPILRA+RNE+
Sbjct: 454 DNLLDEENDPILRALRNEN 472


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
           putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus]
          Length = 504

 Score =  247 bits (630), Expect(2) = 1e-64
 Identities = 112/145 (77%), Positives = 129/145 (88%)
 Frame = -2

Query: 710 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLPQCFPEVRKIFKDNYPKT 531
           RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSL+K+TKQSL Q FPE++K+   + P  
Sbjct: 332 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLHASEPAK 391

Query: 530 CSFNDCLHIGEQGCIVEGDWERYPYYFQLYDEIKIREEYQLRTLGTKREGDVRYKTGDLG 351
           CSFNDCLH+GE GC+++GDWERY YYFQL DEI+IREE+QLRT GTKREGDVR K G++G
Sbjct: 392 CSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGEMG 451

Query: 350 VKQAEPRLEPKKHRRVSRKKINQSV 276
           VKQAEPRLE KKHRR SRK++NQS+
Sbjct: 452 VKQAEPRLELKKHRRQSRKRVNQSI 476



 Score = 25.8 bits (55), Expect(2) = 1e-64
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
 Frame = -3

Query: 196 ENLSDDD----TDPILRAMRNEHR 137
           + L D+D    T+PILRAM+NE++
Sbjct: 481 DELEDEDDLEETNPILRAMKNENQ 504