BLASTX nr result

ID: Bupleurum21_contig00027412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027412
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268838.2| PREDICTED: cyclin-T1-5-like isoform 1 [Vitis...    72   6e-11
emb|CBI21689.3| unnamed protein product [Vitis vinifera]               72   6e-11
emb|CAN74426.1| hypothetical protein VITISV_010983 [Vitis vinifera]    72   6e-11
ref|XP_002513390.1| Cyclin-L2, putative [Ricinus communis] gi|22...    64   1e-08

>ref|XP_002268838.2| PREDICTED: cyclin-T1-5-like isoform 1 [Vitis vinifera]
          Length = 623

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = -3

Query: 232 EFDNVEEGEVPSFDDVGRSYQSPKSNNRKRKSGSPLEKPMDVK-RHEFMAPAAGLHSHND 56
           + +NVEEGEV +FDD  R+++SPKS++RKRK GS  EK  D K RH++M P +  H+H+D
Sbjct: 538 DLENVEEGEVSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYM-PGSHHHNHHD 596

Query: 55  L-*DIEGLVHLVYSDKDHK 2
              D   L  L YS++DHK
Sbjct: 597 FPEDRNRLGRLGYSERDHK 615


>emb|CBI21689.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = -3

Query: 232 EFDNVEEGEVPSFDDVGRSYQSPKSNNRKRKSGSPLEKPMDVK-RHEFMAPAAGLHSHND 56
           + +NVEEGEV +FDD  R+++SPKS++RKRK GS  EK  D K RH++M P +  H+H+D
Sbjct: 454 DLENVEEGEVSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYM-PGSHHHNHHD 512

Query: 55  L-*DIEGLVHLVYSDKDHK 2
              D   L  L YS++DHK
Sbjct: 513 FPEDRNRLGRLGYSERDHK 531


>emb|CAN74426.1| hypothetical protein VITISV_010983 [Vitis vinifera]
          Length = 361

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = -3

Query: 232 EFDNVEEGEVPSFDDVGRSYQSPKSNNRKRKSGSPLEKPMDVK-RHEFMAPAAGLHSHND 56
           + +NVEEGEV +FDD  R+++SPKS++RKRK GS  EK  D K RH++M P +  H+H+D
Sbjct: 276 DLENVEEGEVSAFDDADRAFRSPKSSSRKRKPGSSPEKLSDGKQRHDYM-PGSHHHNHHD 334

Query: 55  L-*DIEGLVHLVYSDKDHK 2
              D   L  L YS++DHK
Sbjct: 335 FPEDRNRLGRLGYSERDHK 353


>ref|XP_002513390.1| Cyclin-L2, putative [Ricinus communis] gi|223547298|gb|EEF48793.1|
           Cyclin-L2, putative [Ricinus communis]
          Length = 570

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = -3

Query: 238 KQEFDNVEEGEVPSFDDVGRSYQSPKSNNRKRKSGSPLEKPMDVKRHEFMAPAAGLHSHN 59
           K +F+N+EEGEVP  DD+ + + SPKS+NRKRKS SP EK  + +     AP +  ++++
Sbjct: 485 KSDFNNMEEGEVP--DDIDQGFHSPKSSNRKRKSRSPPEKISEGRHRNDYAPGSHHYNNH 542

Query: 58  DL*DIEGLVH-LVYSDKDHK 2
           D  D    V+ L Y ++DHK
Sbjct: 543 DYLDDRSRVNRLSYVERDHK 562


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