BLASTX nr result

ID: Bupleurum21_contig00027407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027407
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]    98   6e-19
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    97   1e-18
gb|ABI34293.1| Integrase core domain containing protein [Solanum...    94   2e-17
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    92   3e-17
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    91   7e-17

>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/142 (38%), Positives = 77/142 (54%)
 Frame = -1

Query: 486 WIVDSGASDHMTGSIDKLFNVKSTKANLTITLPTGDVSHITHVGEMKLKNGLILYNVLVV 307
           WI+DSGA+DH+T S + L + K      TI+LP G  +HI  +G + +   + L +VL V
Sbjct: 3   WIIDSGATDHVTSSAE-LLDPKILPKTTTISLPDGGQAHIESIGSLHVTPHIKLDDVLKV 61

Query: 306 PQFNHNLLSIHKLAKDNKCDVKFTPETCEIFSTETKQLQAVGKVYNGLYYLFDDTEXXXX 127
           PQF  NLLS+ KL +  +C V F  + C +    T++   +GK +NGLYYL  D      
Sbjct: 62  PQFQVNLLSVSKLTRALQCIVMFXSDFCVVQDATTRKTXGLGKQHNGLYYLAQDQNPALA 121

Query: 126 XXXXXXXSMDVNLWHLRLGHAS 61
                      +LWH RLGH S
Sbjct: 122 YAIHKHS----DLWHQRLGHPS 139


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/142 (38%), Positives = 78/142 (54%)
 Frame = -1

Query: 486 WIVDSGASDHMTGSIDKLFNVKSTKANLTITLPTGDVSHITHVGEMKLKNGLILYNVLVV 307
           WI+DSGA+DH+T S + L + K+     TI+LP G  +HI  +G + +   + L +VL V
Sbjct: 411 WIIDSGATDHVTSSAE-LLDPKNLPKTTTISLPNGGQAHIESIGSLHVTPHIKLDDVLKV 469

Query: 306 PQFNHNLLSIHKLAKDNKCDVKFTPETCEIFSTETKQLQAVGKVYNGLYYLFDDTEXXXX 127
           PQF  NLLS+ KL +  +C V F  + C +    T++   +GK +NGLYYL  D      
Sbjct: 470 PQFQVNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYLAQDQNPALA 529

Query: 126 XXXXXXXSMDVNLWHLRLGHAS 61
                      +LWH RLGH S
Sbjct: 530 YAIHKHS----DLWHQRLGHPS 547


>gb|ABI34293.1| Integrase core domain containing protein [Solanum demissum]
          Length = 716

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/150 (36%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
 Frame = -1

Query: 489 SWIVDSGASDHMTGSIDKLFNVKSTKANLTITLPTGDVSHITHVGEMKLKNGLILYNVLV 310
           SWIVDSGAS+H+TGS + L +  +      + LPTG+ + I+H G   L  G  L +VL 
Sbjct: 193 SWIVDSGASNHITGSKNLLLHGDTVGNAGKVQLPTGEFAQISHTGNYSLSGGDSLKDVLC 252

Query: 309 VPQFNHNLLSIHKLAKDNKCDVKFTPETCEIFSTETKQLQAVGKVYNGLYYL--FDDTEX 136
           VP F  NL+S+ K+ KD    VKF PE C      T +++  G+  NGLY L   ++   
Sbjct: 253 VPSFKFNLMSVSKVTKDMNGCVKFYPEQCVFQDLCTGKVKVTGREKNGLYILNTRNNDHF 312

Query: 135 XXXXXXXXXXSMDVNLWHLRLGHASVTKMK 46
                         +LWH RLGH  +  ++
Sbjct: 313 LTEGRSMTVSRPLPDLWHRRLGHVPMAVLR 342


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
 Frame = -1

Query: 489  SWIVDSGASDHMTGSIDKLFNVKSTKANLTITLPTGDVSHITHVGEMKLKNGLILYNVLV 310
            SWI+DSGA+DH+T S+  L + K     +T+ LP G   H TH G ++L + + L++VL 
Sbjct: 742  SWILDSGATDHVTCSLHNLHSHKRINP-ITVKLPNGQYVHATHSGTVQLSSNITLHDVLY 800

Query: 309  VPQFNHNLLSIHKLAKDNKCDVKFTPETCEIFSTETKQLQAVGKVYNGLYYLFDD----T 142
            +P F  NL+SI KL     C++ F+  +C +          + +  +GLY+L  +     
Sbjct: 801  IPSFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLYHLIPNQLTTK 860

Query: 141  EXXXXXXXXXXXSMDVNLWHLRLGHASVTKMKSI----PMLKHH 22
                         + ++LWH RLGH S  +++ +    P+L+++
Sbjct: 861  AVNSTITHPRCNVIPIDLWHFRLGHPSAERIQCMKTYYPLLRNN 904


>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 53/155 (34%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
 Frame = -1

Query: 486 WIVDSGASDHMTGSIDKLFNVKSTKANLTITLPTGDVSHITHVGEMKLKNGLILYNVLVV 307
           WI+DSGA+DHMTGS     + K    N  I +  G +S I   G + +   L L+NVL V
Sbjct: 358 WIIDSGATDHMTGSSQIFSSYKPCAGNKKIKIXDGSLSAIAGKGSVFISPSLTLHNVLHV 417

Query: 306 PQFNHNLLSIHKLAKDNKCDVKFTPETCEIFSTETKQLQAVGKVYNGLYYLFDDTEXXXX 127
           P  + NLLSI K+ +D++C   F P  CE     + +     +   GLY+  + +E    
Sbjct: 418 PNLSCNLLSISKITQDHQCQANFYPSYCEFQELTSGRTIGNAREIGGLYFFENGSESRKP 477

Query: 126 XXXXXXXSM------DVNLWHLRLGHASVTKMKSI 40
                  S+      D+ LWH RLGH S   +K +
Sbjct: 478 IQSTCFESISVASSDDIILWHYRLGHPSFQYLKHL 512


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