BLASTX nr result

ID: Bupleurum21_contig00027406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027406
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273517.1| PREDICTED: uncharacterized protein LOC100266...   196   4e-48
ref|XP_002336040.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002327851.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|NP_181854.1| uncharacterized protein [Arabidopsis thaliana] ...   178   1e-42
ref|XP_002880034.1| hypothetical protein ARALYDRAFT_483433 [Arab...   176   4e-42

>ref|XP_002273517.1| PREDICTED: uncharacterized protein LOC100266921 [Vitis vinifera]
          Length = 635

 Score =  196 bits (498), Expect = 4e-48
 Identities = 106/199 (53%), Positives = 137/199 (68%), Gaps = 1/199 (0%)
 Frame = -2

Query: 598 MGLNILCY-VQNLWPFSAVLRNNDLRESDCIVSKLSVPEHTKRFVFAIREPESDAVIYIL 422
           MGL +L   +Q LWPFSA L+ +DL+ SD +V KL +PEHTK+FVFA+R+PES +VIYIL
Sbjct: 1   MGLALLYENLQKLWPFSA-LKFDDLKASDALVRKLPIPEHTKQFVFAVRDPESQSVIYIL 59

Query: 421 CAQNLSERSDMDVECLIREIRPQAVIAQVGDDSLNDDLHSKEDECGVSVGDGTVVNSSIN 242
           CAQNLSERS  D + LIR I P AV+AQVG   + D  H +                   
Sbjct: 60  CAQNLSERSASDADHLIRAIGPDAVVAQVGQSVVADVQHEEG------------------ 101

Query: 241 ALKRLFVQKINKDISDSLPTSSFEVLKRCFLHKINREKYENMAGSLVLKEIFGVGWNRHF 62
                   ++   I+D +PTSSF V+KRCF+ KIN+EKYEN+AGSLVL+E+FG+G++ HF
Sbjct: 102 --------QLENGINDPVPTSSFAVIKRCFIDKINKEKYENVAGSLVLREVFGIGFHGHF 153

Query: 61  VTAKRVAEEVGSSFMLLES 5
           + AKR AEEVGSSF+L+ES
Sbjct: 154 LAAKRAAEEVGSSFLLVES 172


>ref|XP_002336040.1| predicted protein [Populus trichocarpa] gi|222839763|gb|EEE78086.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  184 bits (466), Expect = 2e-44
 Identities = 103/198 (52%), Positives = 135/198 (68%)
 Frame = -2

Query: 598 MGLNILCYVQNLWPFSAVLRNNDLRESDCIVSKLSVPEHTKRFVFAIREPESDAVIYILC 419
           M L  +  +QN+WP S +L+ +DL+ SD IV KLS+PE+TK FVFA+R+P+S +VIYILC
Sbjct: 1   MALEFIYSLQNVWPLS-ILKADDLKASDRIVRKLSIPENTKSFVFAVRDPKSQSVIYILC 59

Query: 418 AQNLSERSDMDVECLIREIRPQAVIAQVGDDSLNDDLHSKEDECGVSVGDGTVVNSSINA 239
           AQNLSERS +DVECLIREIRP AV+AQVG   L   + S+E E G ++ D  V  SS   
Sbjct: 60  AQNLSERSAVDVECLIREIRPDAVVAQVGHSPL-VQIQSEESELG-NIADDLVPTSSFGV 117

Query: 238 LKRLFVQKINKDISDSLPTSSFEVLKRCFLHKINREKYENMAGSLVLKEIFGVGWNRHFV 59
           +K  F                        L+KIN+EKYE++AGSLVL+EIFG G++ H +
Sbjct: 118 IKICF------------------------LNKINKEKYEDLAGSLVLREIFGTGFHGHIL 153

Query: 58  TAKRVAEEVGSSFMLLES 5
            AK+VAEEVGSSF++LE+
Sbjct: 154 AAKKVAEEVGSSFLVLET 171


>ref|XP_002327851.1| predicted protein [Populus trichocarpa] gi|222837260|gb|EEE75639.1|
           predicted protein [Populus trichocarpa]
          Length = 633

 Score =  181 bits (460), Expect = 1e-43
 Identities = 99/198 (50%), Positives = 139/198 (70%)
 Frame = -2

Query: 598 MGLNILCYVQNLWPFSAVLRNNDLRESDCIVSKLSVPEHTKRFVFAIREPESDAVIYILC 419
           M L  +  +QN+WPFS +L+ +DL+ S+ IV KLS+PE+TKRFVFA+R+P+S +VIYILC
Sbjct: 1   MALAFIYSLQNVWPFS-ILKVDDLKASNEIVRKLSIPENTKRFVFAVRDPKSQSVIYILC 59

Query: 418 AQNLSERSDMDVECLIREIRPQAVIAQVGDDSLNDDLHSKEDECGVSVGDGTVVNSSINA 239
           AQNLSERS +DVECL+RE+RP AV+AQVG  +L  D+ ++E E G ++ D  V  SS   
Sbjct: 60  AQNLSERSAVDVECLVREVRPDAVVAQVGHSAL-VDIQTEESELG-NIVDELVPTSSFGV 117

Query: 238 LKRLFVQKINKDISDSLPTSSFEVLKRCFLHKINREKYENMAGSLVLKEIFGVGWNRHFV 59
           +KR F++KINK                        EKYE++AG+LVL+E+FG  ++ H +
Sbjct: 118 IKRCFLEKINK------------------------EKYEDVAGNLVLREMFGTSFHGHIL 153

Query: 58  TAKRVAEEVGSSFMLLES 5
            A+RVA+EVGSSF++LE+
Sbjct: 154 AARRVAKEVGSSFLVLET 171


>ref|NP_181854.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3763934|gb|AAC64314.1| hypothetical protein
           [Arabidopsis thaliana] gi|110737676|dbj|BAF00777.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330255143|gb|AEC10237.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 625

 Score =  178 bits (451), Expect = 1e-42
 Identities = 99/190 (52%), Positives = 127/190 (66%)
 Frame = -2

Query: 574 VQNLWPFSAVLRNNDLRESDCIVSKLSVPEHTKRFVFAIREPESDAVIYILCAQNLSERS 395
           +QN+WPFS + +N+DL+ES  +V +LS+PE TK FVFAIR PE D+ IYIL AQNLSERS
Sbjct: 10  LQNIWPFS-IFQNSDLKESKELVHRLSLPESTKNFVFAIRVPEHDSTIYILAAQNLSERS 68

Query: 394 DMDVECLIREIRPQAVIAQVGDDSLNDDLHSKEDECGVSVGDGTVVNSSINALKRLFVQK 215
             D ECLIREIRP AV+AQV D S   +   +E   G  + D                  
Sbjct: 69  ASDAECLIREIRPGAVVAQV-DKSAFGEAQVEESVLGNGISD------------------ 109

Query: 214 INKDISDSLPTSSFEVLKRCFLHKINREKYENMAGSLVLKEIFGVGWNRHFVTAKRVAEE 35
                  S+PTS+F+VL +CF+ K+N+EKYE++AG +VL+EIFG  +N H + AKRVA E
Sbjct: 110 -------SIPTSAFKVLIQCFVDKVNKEKYESIAGIVVLREIFGTSFNGHLLAAKRVAGE 162

Query: 34  VGSSFMLLES 5
           VGSSFM+LES
Sbjct: 163 VGSSFMVLES 172


>ref|XP_002880034.1| hypothetical protein ARALYDRAFT_483433 [Arabidopsis lyrata subsp.
           lyrata] gi|297325873|gb|EFH56293.1| hypothetical protein
           ARALYDRAFT_483433 [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  176 bits (446), Expect = 4e-42
 Identities = 100/190 (52%), Positives = 129/190 (67%)
 Frame = -2

Query: 574 VQNLWPFSAVLRNNDLRESDCIVSKLSVPEHTKRFVFAIREPESDAVIYILCAQNLSERS 395
           +QN+WPFS +  ++DL+ES  +V +LS+PE TK FVFAIR PE D+ IYIL AQNLSERS
Sbjct: 10  LQNIWPFS-IFVSSDLKESKELVHRLSLPESTKNFVFAIRVPEHDSTIYILAAQNLSERS 68

Query: 394 DMDVECLIREIRPQAVIAQVGDDSLNDDLHSKEDECGVSVGDGTVVNSSINALKRLFVQK 215
             D ECLIREIRP AV+AQV D +   +   +E      +GDG+                
Sbjct: 69  ASDAECLIREIRPGAVVAQV-DKTAFGEAQVEES----VLGDGS---------------- 107

Query: 214 INKDISDSLPTSSFEVLKRCFLHKINREKYENMAGSLVLKEIFGVGWNRHFVTAKRVAEE 35
                SDS+PTS+F+VL +CF+ K+N+EKYE +AG +VL+EIFG  +N H + AKRVA E
Sbjct: 108 -----SDSIPTSAFKVLIQCFVDKVNKEKYEGIAGIVVLREIFGTSFNGHLLAAKRVAGE 162

Query: 34  VGSSFMLLES 5
           VGSSFM+LES
Sbjct: 163 VGSSFMVLES 172


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