BLASTX nr result

ID: Bupleurum21_contig00027401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027401
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like ...   290   1e-76
ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like ...   287   1e-75
emb|CAN62547.1| hypothetical protein VITISV_000759 [Vitis vinifera]   287   1e-75
ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like ...   283   2e-74
ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|2...   281   8e-74

>ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  290 bits (743), Expect = 1e-76
 Identities = 149/217 (68%), Positives = 170/217 (78%), Gaps = 3/217 (1%)
 Frame = -3

Query: 643 ESDSGSEKFRWNYRRTASSNSSSGRIWGKEMEARLKGISSGEATPASTLFSASGRRXXXX 464
           ESD+ S++FRW+YRRT SS+S++ R WGKEMEARLKGISSGE TP S    ASGRR    
Sbjct: 67  ESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNS----ASGRRAEPV 122

Query: 463 XXXXXXXXXE-WVAQVEPGVLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAENYDKV 287
                    + WVAQVEPGVLITFVSLPRGGNDLKRIRFSRE FNKWQAQ+WWAENYDKV
Sbjct: 123 VLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKV 182

Query: 286 IELYNVQRLNKQAFPLATPPGSEDDQSLKINSVHESPVTPPLNRERLPRTLYRP--VGTG 113
           +ELYNVQR N+QAFPL TPP SED+ S K+ S  ESPVTPPLNRERLPR +YRP  +G G
Sbjct: 183 MELYNVQRFNRQAFPLPTPPRSEDESS-KLESAEESPVTPPLNRERLPRNMYRPTGMGMG 241

Query: 112 YSSSDSYEHQSTHLPHNTDSCGLTATPKISSISGTKT 2
           YSSSDS++HQS    H  DS G+ +TPK+S+IS  KT
Sbjct: 242 YSSSDSFDHQSMQSRHFYDSNGMNSTPKVSTISAAKT 278



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/86 (40%), Positives = 46/86 (53%)
 Frame = -3

Query: 532 ISSGEATPASTLFSASGRRXXXXXXXXXXXXXEWVAQVEPGVLITFVSLPRGGNDLKRIR 353
           ISS +A+  S+    + R              EWV Q EPGV IT  +LP G  +LKR+R
Sbjct: 280 ISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVR 339

Query: 352 FSRETFNKWQAQKWWAENYDKVIELY 275
           FSRE F +  A+ WW EN  ++ E Y
Sbjct: 340 FSREKFGEMHARLWWEENRARIHEQY 365


>ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like [Vitis vinifera]
          Length = 371

 Score =  287 bits (735), Expect = 1e-75
 Identities = 153/221 (69%), Positives = 171/221 (77%), Gaps = 4/221 (1%)
 Frame = -3

Query: 652 SLAESDSGS--EKFRWNYRRTASSNSSSGRIWGKEMEARLKGISSGEATPASTLFSASGR 479
           S AESDS S  E+FRW+YRRT SS+S++ R WGKEMEARLKG+SSGE TPAS    ASGR
Sbjct: 69  SYAESDSASASERFRWSYRRTGSSSSTTPR-WGKEMEARLKGLSSGEGTPAS----ASGR 123

Query: 478 RXXXXXXXXXXXXXEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAEN 299
           R             EWVAQVEPGVLITFVSLPRGGNDLKRIRFSRE FNKWQAQ+WWAEN
Sbjct: 124 RVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAEN 183

Query: 298 YDKVIELYNVQRLNKQAFPLATPPGSEDDQSLKINSVHESPVTPPLNRERLPRTLYRP-- 125
           YD+V+ELYNVQR N+QAFPL TPP SED+ S K+ S  +SPVTPPL +ERLPR LYRP  
Sbjct: 184 YDRVMELYNVQRFNRQAFPLPTPPRSEDESS-KMESAEDSPVTPPLTKERLPRNLYRPSG 242

Query: 124 VGTGYSSSDSYEHQSTHLPHNTDSCGLTATPKISSISGTKT 2
           +G GYSSSDS +H      H  DS GLT+TPK+SSISG KT
Sbjct: 243 LGMGYSSSDSLDHHPMQPRHFYDSGGLTSTPKLSSISGAKT 283



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 26/53 (49%), Positives = 35/53 (66%)
 Frame = -3

Query: 433 WVAQVEPGVLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAENYDKVIELY 275
           WV + EPGV IT  +LP G  +L+R+RFSRE F +  A+ WW EN  ++ E Y
Sbjct: 318 WVEEDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIHEQY 370


>emb|CAN62547.1| hypothetical protein VITISV_000759 [Vitis vinifera]
          Length = 560

 Score =  287 bits (735), Expect = 1e-75
 Identities = 153/221 (69%), Positives = 171/221 (77%), Gaps = 4/221 (1%)
 Frame = -3

Query: 652 SLAESDSGS--EKFRWNYRRTASSNSSSGRIWGKEMEARLKGISSGEATPASTLFSASGR 479
           S AESDS S  E+FRW+YRRT SS+S++ R WGKEMEARLKG+SSGE TPAS    ASGR
Sbjct: 188 SYAESDSASASERFRWSYRRTGSSSSTTPR-WGKEMEARLKGLSSGEGTPAS----ASGR 242

Query: 478 RXXXXXXXXXXXXXEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAEN 299
           R             EWVAQVEPGVLITFVSLPRGGNDLKRIRFSRE FNKWQAQ+WWAEN
Sbjct: 243 RVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAEN 302

Query: 298 YDKVIELYNVQRLNKQAFPLATPPGSEDDQSLKINSVHESPVTPPLNRERLPRTLYRP-- 125
           YD+V+ELYNVQR N+QAFPL TPP SED+ S K+ S  +SPVTPPL +ERLPR LYRP  
Sbjct: 303 YDRVMELYNVQRFNRQAFPLPTPPRSEDESS-KMESAEDSPVTPPLTKERLPRNLYRPSG 361

Query: 124 VGTGYSSSDSYEHQSTHLPHNTDSCGLTATPKISSISGTKT 2
           +G GYSSSDS +H      H  DS GLT+TPK+SSISG KT
Sbjct: 362 LGMGYSSSDSLDHHPMQPRHFYDSGGLTSTPKLSSISGAKT 402


>ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  283 bits (725), Expect = 2e-74
 Identities = 147/217 (67%), Positives = 168/217 (77%), Gaps = 3/217 (1%)
 Frame = -3

Query: 643 ESDSGSEKFRWNYRRTASSNSSSGRIWGKEMEARLKGISSGEATPASTLFSASGRRXXXX 464
           E D+ S++FRW+YRRT SS+S++ R WGKEMEARLKGISSGE TP S    ASGRR    
Sbjct: 67  ELDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNS----ASGRRAEPV 122

Query: 463 XXXXXXXXXE-WVAQVEPGVLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAENYDKV 287
                    + WVAQVEPGVLITFVSLPRGGNDLKRIRFSRE FNKWQAQ+WWAENYDKV
Sbjct: 123 VLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKV 182

Query: 286 IELYNVQRLNKQAFPLATPPGSEDDQSLKINSVHESPVTPPLNRERLPRTLYRP--VGTG 113
           +ELYNVQR N+QAFPL TP  SED+ S K+ SV ESPVTPPLN ERLPR +YRP  +G G
Sbjct: 183 MELYNVQRFNRQAFPLPTPLRSEDESS-KLESVEESPVTPPLNSERLPRNMYRPTGMGMG 241

Query: 112 YSSSDSYEHQSTHLPHNTDSCGLTATPKISSISGTKT 2
           YSSSDS++HQS    H  DS G+ +TPK+S+IS  KT
Sbjct: 242 YSSSDSFDHQSMQSRHFYDSNGMNSTPKVSTISAAKT 278



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/86 (41%), Positives = 46/86 (53%)
 Frame = -3

Query: 532 ISSGEATPASTLFSASGRRXXXXXXXXXXXXXEWVAQVEPGVLITFVSLPRGGNDLKRIR 353
           ISS EA+  S+    + R              EWV Q EPGV IT  +LP G  +LKR+R
Sbjct: 280 ISSMEASIRSSSSREADRSGDFSISNASELETEWVEQDEPGVYITIRALPGGARELKRVR 339

Query: 352 FSRETFNKWQAQKWWAENYDKVIELY 275
           FSRE F +  A+ WW EN  ++ E Y
Sbjct: 340 FSREKFGEMHARLWWEENRARIHEQY 365


>ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|222855175|gb|EEE92722.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  281 bits (719), Expect = 8e-74
 Identities = 147/219 (67%), Positives = 167/219 (76%), Gaps = 5/219 (2%)
 Frame = -3

Query: 643 ESDSGSEKFRWNYRRTASSNSSSGRIWGKEMEARLKGISS--GEATPASTLFSASGRRXX 470
           ESD+ SEKFRW+ RRT SS+S++ R WGKEMEARLKGISS  GE TP S   + SGRR  
Sbjct: 74  ESDAESEKFRWSLRRTGSSSSTTPRTWGKEMEARLKGISSSSGEGTPNSV--NGSGRRVD 131

Query: 469 XXXXXXXXXXXE-WVAQVEPGVLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAENYD 293
                      + WVAQVEPGVLITFVSLPRGGNDLKRIRFSR+ FNKWQAQ+WWAENYD
Sbjct: 132 PPIVFVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYD 191

Query: 292 KVIELYNVQRLNKQAFPLATPPGSEDDQSLKINSVHESPVTPPLNRERLPRTLYRP--VG 119
           +++ELYNVQR N+QAFPL TPP SED+ S K+ S  +SPVTPPLNRERLPR LYRP  +G
Sbjct: 192 RIMELYNVQRFNRQAFPLPTPPRSEDESS-KMESAEDSPVTPPLNRERLPRNLYRPTGMG 250

Query: 118 TGYSSSDSYEHQSTHLPHNTDSCGLTATPKISSISGTKT 2
            GYSSSDS +H      H  DS G T+TPK+SSISG KT
Sbjct: 251 MGYSSSDSLDHHPLQARHYCDSIGFTSTPKLSSISGAKT 289



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/105 (35%), Positives = 53/105 (50%)
 Frame = -3

Query: 589 SNSSSGRIWGKEMEARLKGISSGEATPASTLFSASGRRXXXXXXXXXXXXXEWVAQVEPG 410
           S+ S  +     M+A ++  SS EA  +  L  ++                EWV Q EPG
Sbjct: 282 SSISGAKTETSSMDASIRSSSSREADRSGELSISNAS----------DMETEWVEQDEPG 331

Query: 409 VLITFVSLPRGGNDLKRIRFSRETFNKWQAQKWWAENYDKVIELY 275
           V IT  +LP G  +L+R+RFSRE F +  A+ WW EN  ++ E Y
Sbjct: 332 VYITIRALPGGKRELRRVRFSRERFGEMHARVWWEENRARIHEQY 376


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