BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027390
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43141.1| cyclin D2 [Daucus carota]                             265   3e-69
emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]               234   7e-60
ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423...   209   3e-52
gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                208   4e-52
ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...   204   8e-51

>emb|CAD43141.1| cyclin D2 [Daucus carota]
          Length = 382

 Score =  265 bits (678), Expect = 3e-69
 Identities = 135/181 (74%), Positives = 151/181 (83%), Gaps = 3/181 (1%)
 Frame = -2

Query: 535 SLLCTEPNNLCFDDL---DDQTHQSDCDNLVGDDGSEPLNCFIPFQRDEILCLMFEKESE 365
           SLLCTE NNLCFDDL   DDQ  + DC+N+VG++ SE L C +P QRDE    +FE +  
Sbjct: 17  SLLCTETNNLCFDDLEARDDQDPRIDCENVVGNE-SEALICAVPLQRDEDFVFVFESKVN 75

Query: 364 FLPTSDFLEKLRSGDIDLCVRKEAIDWIYKAHAHYRFGALTVCLAVNYLDRFLSLYELPS 185
           F P   F    RSG++DLCVRKEA+DWIYKAHAHY FGAL+VCLAVNYLDRFLSLYELPS
Sbjct: 76  FCPEVIFSTD-RSGELDLCVRKEALDWIYKAHAHYNFGALSVCLAVNYLDRFLSLYELPS 134

Query: 184 GRNWTVQLLSVACLSLAAKLEEVNVPLIVDLQVADPKFVFESKTIKRMELLVLSTLKWRM 5
           G+ WTVQLL+VACLSLAAK+EEVNVPL VDLQVADPKFVFE+KTIKRMELLVLSTLKWRM
Sbjct: 135 GKKWTVQLLAVACLSLAAKMEEVNVPLTVDLQVADPKFVFEAKTIKRMELLVLSTLKWRM 194

Query: 4   Q 2
           Q
Sbjct: 195 Q 195


>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
          Length = 354

 Score =  234 bits (597), Expect = 7e-60
 Identities = 120/190 (63%), Positives = 145/190 (76%), Gaps = 7/190 (3%)
 Frame = -2

Query: 550 DCAAQSLLCTEPNNLCFDDLDD-----QTHQSDCDNLVGDDG--SEPLNCFIPFQRDEIL 392
           D  A +LLCTE  +LCFDD+D      Q  ++   +L  ++G  SEPL   +P   +E L
Sbjct: 8   DFVASNLLCTETKSLCFDDVDSLTISQQNIETKSKDLSFNNGIRSEPL-IDLPSLSEECL 66

Query: 391 CLMFEKESEFLPTSDFLEKLRSGDIDLCVRKEAIDWIYKAHAHYRFGALTVCLAVNYLDR 212
             M ++E EFLP  D++E+LRSGD+DL VRKEA+DWI KAH HY FG L+ CL++NYLDR
Sbjct: 67  SFMVQREMEFLPKDDYVERLRSGDLDLSVRKEALDWILKAHMHYGFGELSFCLSINYLDR 126

Query: 211 FLSLYELPSGRNWTVQLLSVACLSLAAKLEEVNVPLIVDLQVADPKFVFESKTIKRMELL 32
           FLSLYELP  + WTVQLL+VACLSLAAK+EE+NVPL VDLQV DPKFVFE KTI+RMELL
Sbjct: 127 FLSLYELPRSKTWTVQLLAVACLSLAAKMEEINVPLTVDLQVGDPKFVFEGKTIQRMELL 186

Query: 31  VLSTLKWRMQ 2
           VLSTLKWRMQ
Sbjct: 187 VLSTLKWRMQ 196


>ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423|gb|AES96046.1| Cyclin
           D2 [Medicago truncatula]
          Length = 346

 Score =  209 bits (531), Expect = 3e-52
 Identities = 104/188 (55%), Positives = 141/188 (75%), Gaps = 5/188 (2%)
 Frame = -2

Query: 550 DCAAQSLLCTEPNNLCFDDL--DDQTHQSDCDNL---VGDDGSEPLNCFIPFQRDEILCL 386
           D A  +LLC+E N+ CFDD+  DD       D+    + + GS+   CF+  Q +EI+ +
Sbjct: 6   DSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVA-QSEEIVKV 64

Query: 385 MFEKESEFLPTSDFLEKLRSGDIDLCVRKEAIDWIYKAHAHYRFGALTVCLAVNYLDRFL 206
           M EKE + LP  D+L +LR GD+DL VR+EA+DWI+KAHA+Y FG L++CL+VNYLDRFL
Sbjct: 65  MVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYYGFGPLSLCLSVNYLDRFL 124

Query: 205 SLYELPSGRNWTVQLLSVACLSLAAKLEEVNVPLIVDLQVADPKFVFESKTIKRMELLVL 26
           S+++ P G  WTVQLL+VAC SLAAK+EEV VP  VDLQV +PKFVF++KTI+RMEL++L
Sbjct: 125 SVFQFPRGVTWTVQLLAVACFSLAAKMEEVKVPQSVDLQVGEPKFVFQAKTIQRMELMIL 184

Query: 25  STLKWRMQ 2
           S+L W+M+
Sbjct: 185 SSLGWKMR 192


>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score =  208 bits (530), Expect = 4e-52
 Identities = 110/197 (55%), Positives = 134/197 (68%), Gaps = 14/197 (7%)
 Frame = -2

Query: 550 DCAAQSLLCTEPNNLCFDDLD--DQT------------HQSDCDNLVGDDGSEPLNCFIP 413
           DCA  +LLC E NN  FDD D  D T            HQ    N  GD G       +P
Sbjct: 6   DCAVSNLLCAEDNNSIFDDNDHYDATVEEFEATWHHGNHQICNQNGGGDGGC------LP 59

Query: 412 FQRDEILCLMFEKESEFLPTSDFLEKLRSGDIDLCVRKEAIDWIYKAHAHYRFGALTVCL 233
            Q DE L LM EKE + LP  D+L++LR+GD+D+  RKEA+DWI K HAH+ FG L   L
Sbjct: 60  MQSDECLVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHFGFGPLCAYL 119

Query: 232 AVNYLDRFLSLYELPSGRNWTVQLLSVACLSLAAKLEEVNVPLIVDLQVADPKFVFESKT 53
           ++NYLDRFLS YELP+G+ W +QLL+VACLSLAAK+EE  VPL +DLQV + +FVFE++T
Sbjct: 120 SINYLDRFLSAYELPNGKPWMMQLLAVACLSLAAKMEETEVPLSLDLQVGESRFVFEART 179

Query: 52  IKRMELLVLSTLKWRMQ 2
           I+RMELLVLSTL WRMQ
Sbjct: 180 IQRMELLVLSTLSWRMQ 196


>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score =  204 bits (519), Expect = 8e-51
 Identities = 108/196 (55%), Positives = 133/196 (67%), Gaps = 13/196 (6%)
 Frame = -2

Query: 550 DCAAQSLLCTEPNNLCFDDLD-------------DQTHQSDCDNLVGDDGSEPLNCFIPF 410
           DCAA SLLC E N+  FDD D              Q H+S       + G   +   +P 
Sbjct: 6   DCAASSLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLIG--LPV 63

Query: 409 QRDEILCLMFEKESEFLPTSDFLEKLRSGDIDLCVRKEAIDWIYKAHAHYRFGALTVCLA 230
           Q DE L LM EKES+ LP +D+L +LRSGD+D+  R++ + WI KAHAH+ FG L   LA
Sbjct: 64  QSDECLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHFGFGPLCAYLA 123

Query: 229 VNYLDRFLSLYELPSGRNWTVQLLSVACLSLAAKLEEVNVPLIVDLQVADPKFVFESKTI 50
           +NYLDRFLS YELP G+ W  QLL+VACLSLAAK+EE  VPL +DLQVA+ +FVFE++TI
Sbjct: 124 INYLDRFLSTYELPKGKAWMAQLLAVACLSLAAKMEENEVPLCLDLQVAESRFVFEARTI 183

Query: 49  KRMELLVLSTLKWRMQ 2
           +RMELLVL TLKWRMQ
Sbjct: 184 QRMELLVLRTLKWRMQ 199