BLASTX nr result

ID: Bupleurum21_contig00027382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027382
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318509.1| white-brown-complex ABC transporter family [...   153   2e-35
ref|XP_002278856.1| PREDICTED: ABC transporter G family member 1...   149   2e-34
ref|XP_002530787.1| ATP-binding cassette transporter, putative [...   146   2e-33
ref|XP_003631132.1| ABC transporter G family member [Medicago tr...   136   2e-30
ref|XP_004163819.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   133   1e-29

>ref|XP_002318509.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859182|gb|EEE96729.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 812

 Score =  153 bits (386), Expect = 2e-35
 Identities = 77/119 (64%), Positives = 94/119 (78%)
 Frame = +1

Query: 1   QMSSRYSTP*QIRAQSKVPVVFSPSAAEPYSVSYEQFDVQVLDEPANHGPKFANPWFREV 180
           Q SSR+STP  + ++ K P   +PS  +PYS SYE+F  +   + ++HGPKFANPW REV
Sbjct: 463 QSSSRFSTPQHVVSRPKPPEFSNPSL-DPYSPSYEEFSCEEELDESDHGPKFANPWLREV 521

Query: 181 AVLSWRTILNVIRTPELFLSREIVLAVMGLVLASLFRNLHDFDFKTINRLLNFYIFAVC 357
           AVLSWRT+LNV+RTPELFLSREIVLAVM L+L+SLF+NL    F+ INRLLNFYIFAVC
Sbjct: 522 AVLSWRTVLNVVRTPELFLSREIVLAVMALILSSLFKNLGHPSFQDINRLLNFYIFAVC 580


>ref|XP_002278856.1| PREDICTED: ABC transporter G family member 1-like [Vitis vinifera]
          Length = 801

 Score =  149 bits (376), Expect = 2e-34
 Identities = 83/118 (70%), Positives = 91/118 (77%)
 Frame = +1

Query: 4   MSSRYSTP*QIRAQSKVPVVFSPSAAEPYSVSYEQFDVQVLDEPANHGPKFANPWFREVA 183
           +SSRYS P Q  A  K PV FSPSA E Y  SYE  +++VLDEP  H  KFANPW REVA
Sbjct: 457 VSSRYSLPQQTPAHVKTPV-FSPSA-ETYEASYE-LEMEVLDEP-EHRAKFANPWLREVA 512

Query: 184 VLSWRTILNVIRTPELFLSREIVLAVMGLVLASLFRNLHDFDFKTINRLLNFYIFAVC 357
           VLSWR ILN+IRTPELFLSREIVL VM L+L+SLF NL D   KT+NRLLNFYIFAVC
Sbjct: 513 VLSWRNILNIIRTPELFLSREIVLLVMALILSSLFPNLGDDSLKTVNRLLNFYIFAVC 570


>ref|XP_002530787.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223529642|gb|EEF31588.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 814

 Score =  146 bits (368), Expect = 2e-33
 Identities = 77/122 (63%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
 Frame = +1

Query: 1   QMSSRYSTP*QIRAQSKVPVVFSPSAAEPYSVSYEQFDVQ---VLDEPANHGPKFANPWF 171
           Q+SS++ +     ++ K PV+FS S+ + Y+ SY  FD++   +LD PA  GPKFANPW 
Sbjct: 463 QVSSQFPSAQLAPSRPKTPVIFS-SSVDSYTASYADFDLEEEELLDVPAQ-GPKFANPWL 520

Query: 172 REVAVLSWRTILNVIRTPELFLSREIVLAVMGLVLASLFRNLHDFDFKTINRLLNFYIFA 351
           REVAVLSWRT LNV+RTPELFLSREIVL VM L+L+SLF+NL +  FKTINRLLNFYIFA
Sbjct: 521 REVAVLSWRTALNVVRTPELFLSREIVLTVMALILSSLFKNLSEPTFKTINRLLNFYIFA 580

Query: 352 VC 357
           VC
Sbjct: 581 VC 582


>ref|XP_003631132.1| ABC transporter G family member [Medicago truncatula]
           gi|258518201|gb|ACV73541.1| STR [Medicago truncatula]
           gi|258518203|gb|ACV73542.1| STR [Medicago truncatula]
           gi|355525154|gb|AET05608.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 817

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/120 (60%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   QMSSRYSTP*QIRAQSKVPVVFSPSAAEPYSVSYEQFDVQ-VLDEPANHGPKFANPWFRE 177
           Q S+ Y  P  I+  + V       +A  Y+ SYE+F+++ VLDEP + GPK+ANPW RE
Sbjct: 468 QHSASYQDPYYIQKTNTVVGQSMDYSATSYAPSYEEFEIEEVLDEP-DLGPKYANPWLRE 526

Query: 178 VAVLSWRTILNVIRTPELFLSREIVLAVMGLVLASLFRNLHDFDFKTINRLLNFYIFAVC 357
           VAVLSWRT+LNVIRTPELF SREIVL VM LVL+++F+NL D  F  INRLLNFYIFAVC
Sbjct: 527 VAVLSWRTVLNVIRTPELFASREIVLTVMALVLSTIFKNLGDTTFIDINRLLNFYIFAVC 586


>ref|XP_004163819.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           1-like [Cucumis sativus]
          Length = 813

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
 Frame = +1

Query: 40  AQSKVPVVFSPSAAEPYSVSYEQFDVQ-VLDEPANHGPKFANPWFREVAVLSWRTILNVI 216
           + +K+P VFS S  + +  S++  D++ VLDEP +HGPK+ANPW REV VLSWRT LNVI
Sbjct: 476 SHAKIPSVFSMSM-DSHFPSFQDTDIEEVLDEP-DHGPKYANPWLREVIVLSWRTALNVI 533

Query: 217 RTPELFLSREIVLAVMGLVLASLFRNLHDFDFKTINRLLNFYIFAVC 357
           RTPELFLSREIVL VM L+L+S+F+NL    F+ +NRLLNFYIFAVC
Sbjct: 534 RTPELFLSREIVLTVMALILSSMFKNLGHASFRDVNRLLNFYIFAVC 580


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