BLASTX nr result

ID: Bupleurum21_contig00027381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027381
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275658.1| PREDICTED: uncharacterized protein LOC100258...   115   1e-23
dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]      99   2e-18
ref|XP_002879965.1| hypothetical protein ARALYDRAFT_483291 [Arab...    95   2e-17
ref|XP_002330857.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|NP_180334.1| cysteine/histidine-rich C1 domain-containing pr...    94   3e-17

>ref|XP_002275658.1| PREDICTED: uncharacterized protein LOC100258837 [Vitis vinifera]
          Length = 252

 Score =  115 bits (288), Expect = 1e-23
 Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
 Frame = +1

Query: 34  MEKNHFSHIHHLARHQNIPQGHDIYCSGCKLEATGALVYVCWECRFFLHEQCFNAXXXXX 213
           ME  HF+H H+LA  + +  G+ I+CSGC+   + +  Y CW+C FFLH +C NA     
Sbjct: 1   MEYKHFNHEHNLAIFE-LQAGNGIHCSGCRTLCSNS-AYACWKCDFFLHLECGNANRAME 58

Query: 214 XXXXXXXXLTLAPYPTYPSNSFYCNSCNLIGTGFAYNCSLCEFDIHIHCAYMTQTSPHH- 390
                   LTL PYPTY + SF CN+C   G+ F+Y CSLCEFD+HI CA +     H  
Sbjct: 59  HPSHELHHLTLVPYPTYSAGSFVCNACGAPGSSFSYCCSLCEFDLHIRCALLPAIISHRA 118

Query: 391 --DQSSPAYSSNYQQQNSYPNHVPD 459
              + S  Y    Q + S P +  D
Sbjct: 119 HPHELSLTYGLGPQAKVSSPPNACD 143


>dbj|BAF80453.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 212

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 65/215 (30%), Positives = 89/215 (41%), Gaps = 4/215 (1%)
 Frame = +1

Query: 16  ELRETTMEKNHFSHIH--HLARHQNIPQGHDIYCSGCKLEATGALVYVCWECRFFLHEQC 189
           E +E+    NHFSH H   L  +QN        CSGCK++A G+ +Y C  C FFLH +C
Sbjct: 7   EPQESKNTINHFSHPHPLELITNQNFASSSSQLCSGCKIQAIGS-IYTCKSCNFFLHTEC 65

Query: 190 FNAXXXXXXXXXXXXXLTLAPYPTYPSNSFYCNSCNLIGTGFAYNCSLCEFDIHIHCAYM 369
                            TL P P YP   F C++C   G GF+Y+C  C  D+HI CA  
Sbjct: 66  SQMPQQITHPFDKEHHFTLLPKPIYPDGKFNCDACGENGDGFSYHCKTCGTDLHILCAVF 125

Query: 370 TQTSPHHDQSSPAYSSNYQQQNSYPNHVPDQTNSGPIPVIYPPQHH-YNTTTPNYPNASS 546
            Q   H       +S ++Q    +    P ++    I       H  Y   T  +     
Sbjct: 126 PQCVTH-------WSHHHQLDLKFSPPYPGKSFCCDICKKVGTNHWLYRCQTCGF----D 174

Query: 547 THKHNTT-PIDESSSHNHEQMPNFNPQPSETKHFT 648
            H + TT       SH H+        P + +HFT
Sbjct: 175 AHLNCTTLQAPPHQSHIHQNPTTSRSAPQQQQHFT 209


>ref|XP_002879965.1| hypothetical protein ARALYDRAFT_483291 [Arabidopsis lyrata subsp.
           lyrata] gi|297325804|gb|EFH56224.1| hypothetical protein
           ARALYDRAFT_483291 [Arabidopsis lyrata subsp. lyrata]
          Length = 268

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 53/133 (39%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
 Frame = +1

Query: 34  MEKNHFSHIHHLARHQNIPQGHD---IYCSGCKLEATGA-LVYVCWECRFFLHEQCFNAX 201
           ME  HFSH H L   Q  P G     + CSGC+   + +   Y+C  C F LHEQC NA 
Sbjct: 1   MEYKHFSHPHSLKLQQIQPHGSSDSLVICSGCESAISDSETAYICSTCDFNLHEQCGNAV 60

Query: 202 XXXXXXXXXXXX-LTLAPYPTYPSNSFYCNSCNLIG-TGFAYNCSLCEFDIHIHCAYMTQ 375
                        LTL PY TY +  F C +C   G  GF+Y C LC+FD+H+ CA++ Q
Sbjct: 61  RGMLHPSHAGLHHLTLVPYTTYSAGIFLCRACGCTGGKGFSYCCPLCDFDLHVQCAHLPQ 120

Query: 376 TSPHHDQSSPAYS 414
              H  +S P +S
Sbjct: 121 VLVH--ESHPLHS 131


>ref|XP_002330857.1| predicted protein [Populus trichocarpa] gi|222872679|gb|EEF09810.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
 Frame = +1

Query: 46  HFSHIHHLARHQNIPQGHDIYCSGCKLEATGALVYVCWE--CRFFLHEQCFNAXXXXXXX 219
           HFSH H L R  ++ +  +  CSGC+L+ +G+  Y C +  C FFLH+ CF         
Sbjct: 19  HFSHSHPL-RPVDVKEEEESICSGCELDLSGS-AYKCTKSTCDFFLHKSCFELPRELEHT 76

Query: 220 XXXXXXLTLAPYPTYPSNSFYCNSCNLIGTGFAYNCSLCEFDIHIHCAYMTQTSPHHDQS 399
                 L L   P    + F CN+C   GT FAY+C+ C+F++H+ CA++ +T  H D +
Sbjct: 77  SHPQHLLVLLSSPPGDDSKFTCNACGDYGTSFAYHCATCQFNLHVGCAFLPKTMKHVDHN 136

Query: 400 SP---AYSSNY 423
            P   +YS+N+
Sbjct: 137 HPLTLSYSTNF 147



 Score = 71.2 bits (173), Expect(2) = 1e-11
 Identities = 29/64 (45%), Positives = 44/64 (68%)
 Frame = +1

Query: 637 KHFTHGHPMYLTEVREKHMKVCAGCDENITGLAYVCKYSNDDQCEFNLH*SCFDLPQEIR 816
           KHF+H HP+   +V+E+   +C+GC+ +++G AY C  S    C+F LH SCF+LP+E+ 
Sbjct: 18  KHFSHSHPLRPVDVKEEEESICSGCELDLSGSAYKCTKST---CDFFLHKSCFELPRELE 74

Query: 817 HKSH 828
           H SH
Sbjct: 75  HTSH 78



 Score = 25.0 bits (53), Expect(2) = 1e-11
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 830 NCKICQFDLHSDCVF 874
           +C  CQF+LH  C F
Sbjct: 111 HCATCQFNLHVGCAF 125


>ref|NP_180334.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|3860266|gb|AAC73034.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252929|gb|AEC08023.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 718

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 63/218 (28%), Positives = 85/218 (38%), Gaps = 25/218 (11%)
 Frame = +1

Query: 43  NHFSHIHHLARHQNIPQGHDIYCSGCKLEATGALVYVCWECRFFLHEQCFNAXXXXXXXX 222
           NHFSH H L   Q  P      CS CKL      VY C  C F LHE C           
Sbjct: 13  NHFSHPHRL---QLTPATSSPPCSACKLTGGNGRVYSCRPCNFSLHESCSKMKQVITHPS 69

Query: 223 XXXXXLTLAPYPTYPSNSFYCNSCNLIGTGFAYNCSLCEFDIHIHCAY-----MTQTSPH 387
                L+L   P Y    F C+ C + GTGF+Y CS+C+FDIH  CAY     + ++ P 
Sbjct: 70  HPSHTLSLLVAPVYDGGYFNCDGCGIHGTGFSYQCSVCDFDIHALCAYKPLSIIHKSHPQ 129

Query: 388 HDQSSPAYSSNYQQQNSYPNHVPDQTN--------------------SGPIPVIYPPQHH 507
           H+    A+ S Y     +   +  +                      +GP P +   QH 
Sbjct: 130 HNLKL-AFQSPYGANKGFSCDICRKIGKNQWLYRCIPCEFDAHVGCITGPNPHLL--QHS 186

Query: 508 YNTTTPNYPNASSTHKHNTTPIDESSSHNHEQMPNFNP 621
            +   P+  +A      N+ P+    S+    MP   P
Sbjct: 187 TSAPNPHTHHAGHPQHQNSLPVPNQGSNRVRPMPMTRP 224



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 60/202 (29%), Positives = 84/202 (41%), Gaps = 13/202 (6%)
 Frame = +1

Query: 46  HFSHIHHLARHQNIP--QGHDIYCSGCKLEATGALVYVCWECRFFLHEQCFNAXXXXXXX 219
           H SH  H       P   G    C GC +  TG   Y C  C F +H  C          
Sbjct: 67  HPSHPSHTLSLLVAPVYDGGYFNCDGCGIHGTG-FSYQCSVCDFDIHALCAYKPLSIIHK 125

Query: 220 XXXXXXLTLAPYPTYPSNS-FYCNSCNLIGTG-FAYNCSLCEFDIHIHCAYMTQTSPH-- 387
                 L LA    Y +N  F C+ C  IG   + Y C  CEFD H+ C  +T  +PH  
Sbjct: 126 SHPQHNLKLAFQSPYGANKGFSCDICRKIGKNQWLYRCIPCEFDAHVGC--ITGPNPHLL 183

Query: 388 -HDQSSP----AYSSNYQQQNSYPNHVPDQTNS--GPIPVIYPPQHHYNTTTPNYPNASS 546
            H  S+P     ++ + Q QNS P  VP+Q ++   P+P+  P +    T  PN P A +
Sbjct: 184 QHSTSAPNPHTHHAGHPQHQNSLP--VPNQGSNRVRPMPMTRPNR----TINPNRPIAQN 237

Query: 547 THKHNTTPIDESSSHNHEQMPN 612
              +     + +  +N +  PN
Sbjct: 238 AAVNGPRRQNNNLGYNAQVGPN 259


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