BLASTX nr result

ID: Bupleurum21_contig00027373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027373
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...   309   3e-82
ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|2...   307   2e-81
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...   305   8e-81
ref|XP_003521270.1| PREDICTED: F-box/LRR-repeat protein 17-like ...   297   2e-78
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...   296   2e-78

>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  309 bits (792), Expect = 3e-82
 Identities = 158/233 (67%), Positives = 181/233 (77%)
 Frame = -1

Query: 701  RLQNIHIASTQLSHAVVLSLTAADLRGLRMLSLVLGTEITDASVAAIASSYTNLEXXXXX 522
            RLQN+H+AS +LSHA VL+LTAA+LRGLRMLSLVLGTEITDASV AI+ SY+ LE     
Sbjct: 317  RLQNVHVASVRLSHAAVLALTAANLRGLRMLSLVLGTEITDASVVAISQSYSKLELLDLS 376

Query: 521  XXXXXXXXXGMICNAFPNTLSRLLLALCPNITSSGIQFATAQLPRLELMDCGMTICDLND 342
                     GMICN FP TLSRLLLALCPNITSSGIQFATAQLP LELMDCGMTICDL+ 
Sbjct: 377  GSSISDSGIGMICNVFPGTLSRLLLALCPNITSSGIQFATAQLPLLELMDCGMTICDLSS 436

Query: 341  QDLAXXXXXXXXSQKPANSTLHLMYQKLIIKHGRLKKLSLWGCSGLDALYLNCPKLNDLN 162
            Q            Q    + LHL+YQK+IIKH RLKKLSLWGCSGLDALYLNCP+L DLN
Sbjct: 437  QYPTSDESGDFELQTTFKNKLHLIYQKVIIKHSRLKKLSLWGCSGLDALYLNCPELIDLN 496

Query: 161  LNSCYNLLPESLLIQCPNLENVHASGCQNMVVQSIQNQVSNDFGASGNKQPFK 3
            LNSC NL PE +L+QCP+LE+VHASGC N++++ IQ+QVSN+F A  N+ P K
Sbjct: 497  LNSCKNLHPERVLLQCPSLESVHASGCHNLLIEGIQSQVSNNFAAMENQFPNK 549


>ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|222857075|gb|EEE94622.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  307 bits (786), Expect = 2e-81
 Identities = 158/233 (67%), Positives = 179/233 (76%)
 Frame = -1

Query: 701  RLQNIHIASTQLSHAVVLSLTAADLRGLRMLSLVLGTEITDASVAAIASSYTNLEXXXXX 522
            RLQNIH+AS +LSHA VL+LTAA+LRGLRMLSLV GTEITDASVAAI+ SY+ LE     
Sbjct: 317  RLQNIHVASFRLSHATVLALTAANLRGLRMLSLVFGTEITDASVAAISQSYSKLELLDLS 376

Query: 521  XXXXXXXXXGMICNAFPNTLSRLLLALCPNITSSGIQFATAQLPRLELMDCGMTICDLND 342
                     GMICN FP TLSRLLLALCPNITSSGIQFATAQLP LELMDCGMTICD + 
Sbjct: 377  GSSISDSGIGMICNVFPGTLSRLLLALCPNITSSGIQFATAQLPLLELMDCGMTICDPSS 436

Query: 341  QDLAXXXXXXXXSQKPANSTLHLMYQKLIIKHGRLKKLSLWGCSGLDALYLNCPKLNDLN 162
            Q+           Q    + LHL+YQKLIIKH RLKKLSLWGCSGLDALYLNCP+LNDLN
Sbjct: 437  QNPTCDESGDFELQMTFKNKLHLIYQKLIIKHSRLKKLSLWGCSGLDALYLNCPELNDLN 496

Query: 161  LNSCYNLLPESLLIQCPNLENVHASGCQNMVVQSIQNQVSNDFGASGNKQPFK 3
            LNSC NL PE +L+QCP+LE+VHASGC  ++  +IQ+QVSN+  A  N+ P K
Sbjct: 497  LNSCKNLHPERVLLQCPSLESVHASGCHRLLTGAIQSQVSNNLDAMENQSPHK 549


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
            gi|297735494|emb|CBI17934.3| unnamed protein product
            [Vitis vinifera]
          Length = 574

 Score =  305 bits (780), Expect = 8e-81
 Identities = 161/233 (69%), Positives = 185/233 (79%)
 Frame = -1

Query: 701  RLQNIHIASTQLSHAVVLSLTAADLRGLRMLSLVLGTEITDASVAAIASSYTNLEXXXXX 522
            RLQNIHIAS +LSH+VVL+L AA+ RGLRMLSL+LG+EITDASVAAIASSY+NLE     
Sbjct: 306  RLQNIHIASVRLSHSVVLALAAANFRGLRMLSLLLGSEITDASVAAIASSYSNLELLDLS 365

Query: 521  XXXXXXXXXGMICNAFPNTLSRLLLALCPNITSSGIQFATAQLPRLELMDCGMTICDLND 342
                     GMICN FP TLSRLLLA+CPNI+SSGIQFATAQLP LELMDCGMTI D N 
Sbjct: 366  GSSISDSGIGMICNVFPETLSRLLLAVCPNISSSGIQFATAQLPLLELMDCGMTISDPNS 425

Query: 341  QDLAXXXXXXXXSQKPANSTLHLMYQKLIIKHGRLKKLSLWGCSGLDALYLNCPKLNDLN 162
            Q           SQ+ +NS +HL+YQKLIIKH RLKKLSLWGCSGLDALYLNCP+LNDLN
Sbjct: 426  QGPPSEENIDCESQQVSNSKMHLIYQKLIIKHSRLKKLSLWGCSGLDALYLNCPELNDLN 485

Query: 161  LNSCYNLLPESLLIQCPNLENVHASGCQNMVVQSIQNQVSNDFGASGNKQPFK 3
            LNSC NL PE LL+QCPNLE+VHASGCQ+++V +I++QV+N   A  N+ P K
Sbjct: 486  LNSCTNLHPERLLLQCPNLESVHASGCQDILVGAIESQVNNG-SAVENQFPSK 537


>ref|XP_003521270.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 572

 Score =  297 bits (760), Expect = 2e-78
 Identities = 153/233 (65%), Positives = 176/233 (75%)
 Frame = -1

Query: 701 RLQNIHIASTQLSHAVVLSLTAADLRGLRMLSLVLGTEITDASVAAIASSYTNLEXXXXX 522
           RLQN+HI+S +LSHA VL+LTAA L GLRMLSL+LG+E+TDAS+AAIASSY NLE     
Sbjct: 302 RLQNMHISSMRLSHAAVLALTAAKLSGLRMLSLILGSEVTDASIAAIASSYLNLELLDLS 361

Query: 521 XXXXXXXXXGMICNAFPNTLSRLLLALCPNITSSGIQFATAQLPRLELMDCGMTICDLND 342
                     MICN F  TL+RLLLALCPN+TSSGIQFATAQLP LELMDCGMTIC+ N 
Sbjct: 362 GSSVSDSGVSMICNVFSETLTRLLLALCPNVTSSGIQFATAQLPHLELMDCGMTICEPNS 421

Query: 341 QDLAXXXXXXXXSQKPANSTLHLMYQKLIIKHGRLKKLSLWGCSGLDALYLNCPKLNDLN 162
                        QK +++ LHL  QKLIIKH  LKKLSLWGCSGLDALYLNCP+LNDLN
Sbjct: 422 HH-PTADENNRKLQKTSSTNLHLTNQKLIIKHSCLKKLSLWGCSGLDALYLNCPQLNDLN 480

Query: 161 LNSCYNLLPESLLIQCPNLENVHASGCQNMVVQSIQNQVSNDFGASGNKQPFK 3
           LNSC NL PE LL+QCP+LENVHASGCQ+M++++IQ+QV N F    N  P K
Sbjct: 481 LNSCRNLHPERLLLQCPSLENVHASGCQDMLIEAIQSQVCNAFTDMENPSPCK 533


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
            gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
            protein, putative [Ricinus communis]
          Length = 586

 Score =  296 bits (759), Expect = 2e-78
 Identities = 159/233 (68%), Positives = 179/233 (76%)
 Frame = -1

Query: 701  RLQNIHIASTQLSHAVVLSLTAADLRGLRMLSLVLGTEITDASVAAIASSYTNLEXXXXX 522
            +LQNIHIAS +LSHA VL+LTAA+LRGLRMLSLVLGTEITDASVAAI SSY+ LE     
Sbjct: 318  KLQNIHIASVRLSHAAVLALTAANLRGLRMLSLVLGTEITDASVAAITSSYSKLELLDLS 377

Query: 521  XXXXXXXXXGMICNAFPNTLSRLLLALCPNITSSGIQFATAQLPRLELMDCGMTICDLND 342
                     GMICNAFP TLSRLLLALCPNITSSGIQFATAQLP LELMDCGMTICD + 
Sbjct: 378  GSSISDSGIGMICNAFPGTLSRLLLALCPNITSSGIQFATAQLPLLELMDCGMTICDPSG 437

Query: 341  QDLAXXXXXXXXSQKPANSTLHLMYQKLIIKHGRLKKLSLWGCSGLDALYLNCPKLNDLN 162
               +         +    S LHL+YQKLIIKHGRLKKLSLWGCSGLDAL LNCP+LNDLN
Sbjct: 438  P--SSDGSEEDELRTSFKSKLHLIYQKLIIKHGRLKKLSLWGCSGLDALCLNCPELNDLN 495

Query: 161  LNSCYNLLPESLLIQCPNLENVHASGCQNMVVQSIQNQVSNDFGASGNKQPFK 3
            LNSC NL PE LL+QCP+LE+V ASGC  +++++IQ+Q+ N  GA  N  P K
Sbjct: 496  LNSCKNLHPERLLLQCPSLESVDASGCHKLLIRAIQSQI-NSVGAMENHVPSK 547


Top