BLASTX nr result

ID: Bupleurum21_contig00027359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027359
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   116   4e-24
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]   113   3e-23
gb|AAT38779.2| Polyprotein, putative [Solanum demissum]               113   3e-23
gb|AAT39281.2| Integrase core domain containing protein [Solanum...   113   3e-23
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   110   2e-22

>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  116 bits (290), Expect = 4e-24
 Identities = 74/213 (34%), Positives = 106/213 (49%)
 Frame = +1

Query: 1   LTDSPVSDEDLFISVITQLGPEYKAVTAALRLRETPISFDDLFDRLIDAENQLKKEQVDT 180
           L D+ +SD+DL I  +  LG  +K ++AA+R RETPISF++L D+L++ E  LK+E+   
Sbjct: 169 LIDTHLSDDDLTIFALNGLGSGFKEISAAIRARETPISFEELHDKLVEHETFLKREESRG 228

Query: 181 QTDSPVSPIPTANHTFSTYATRNTKPYPPKPIRPGAHQSAPNTSTYSTWRGPNKSRNQYT 360
            ++  V+   T+   F                           S Y   +  N   N   
Sbjct: 229 GSNVTVNSTRTSFGNFQ--------------------------SRYGNGQNGNGQSNNGK 262

Query: 361 PPFRTPNPASNNRIYCHFCNRTTHQTKECRQLARFLREHSIQPTANYTSFSNSSSQPWLF 540
             F   N  S  R +    N   H  ++C    R L++   QP  ++TSF NSSS  W+ 
Sbjct: 263 RVFN--NRHSQGRKF----NNNGHTARQCHSARRLLQQ---QPEVHHTSFGNSSSSNWIL 313

Query: 541 DTGASHHVTSDPSNLTTYSDYGGPDEITLGDGS 639
           D+GASHHVT D +NL+    Y GPD+I LGDGS
Sbjct: 314 DSGASHHVTGDLTNLSHQQPYEGPDDILLGDGS 346


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score =  113 bits (282), Expect = 3e-23
 Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 3/216 (1%)
 Frame = +1

Query: 1   LTDSPVSDEDLFISVITQLGPEYKAVTAALRLRETPISFDDLFDRLIDAENQLKKEQVDT 180
           L D P+SD+D+ + V+  LGPE++ + A +R RE  ++F++L D LI  EN L++ +  T
Sbjct: 167 LMDHPISDDDITLYVLNGLGPEFREIAAPIRAREKSLAFEELHDLLIGHENYLRRMEAAT 226

Query: 181 QTDSPVSPIPTANHTFSTYATRNTKPYPPKPIRPGAHQSAPNTSTYSTWRGPNKSRNQYT 360
           Q     +   +    FS  A++  K        P +      +S+    R P +S NQ  
Sbjct: 227 QQLGAAANFTSRRSGFS--ASQQQKASHKGNGSPRSQGQYRFSSSNGPSRDPRRSNNQ-- 282

Query: 361 PPFRTPNPASNNRIY---CHFCNRTTHQTKECRQLARFLREHSIQPTANYTSFSNSSSQP 531
                    SN R Y   C +C++  H  K C QL      +S + T N    S+  +  
Sbjct: 283 -----GRFNSNQRRYQPKCQYCDQMGHTAKACPQL------NSSEMTVNCAGTSDGQANK 331

Query: 532 WLFDTGASHHVTSDPSNLTTYSDYGGPDEITLGDGS 639
           WL D+ ASH++T D  NL+ +S+Y G DE+ LGDG+
Sbjct: 332 WLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGT 367


>gb|AAT38779.2| Polyprotein, putative [Solanum demissum]
          Length = 369

 Score =  113 bits (282), Expect = 3e-23
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
 Frame = +1

Query: 10  SPVSDEDLFISVITQLGPEYKAVTAALRLRETPISFDDLFDRLIDAENQLKKEQVDTQTD 189
           +P+S+E+L + ++T LGP+++ ++AA+R R++ IS+ +L+++L+D E  +K E+      
Sbjct: 154 APMSNEELIVKILTGLGPKFREISAAIRARDSAISYPELYEKLLDHELFIKHEEAKKPLL 213

Query: 190 SPVSPIPTANHTFSTYATRNTKPYPPKPIRPGAHQSAPNTST-YSTWRGPNKSRNQYTPP 366
           +P++                         +   H    NTS   S    PN ++++   P
Sbjct: 214 TPITAAIAQ--------------------QINMHPRQGNTSNRRSNANSPNTNQSRRAQP 253

Query: 367 FRTPNPASNNR----IYCHFCNRTTHQTKECRQLARFLREHSIQPTANYTSFSNSSSQPW 534
            R  N     R    + C  C+R  H  K CR  +    +H IQ  ANY + S +   PW
Sbjct: 254 SRAGNNNQQQRYDHTLKCQLCDRLGHSAKVCRSQS---HDH-IQARANYAARSPTQQAPW 309

Query: 535 LFDTGASHHVTSDPSNLTTYSDYGGPDEITLGDGS 639
           + DTGA+HH+ S+  N T    Y GP+EI +GDG+
Sbjct: 310 IVDTGATHHMASNAQNFTDVHTYHGPEEIAMGDGN 344


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score =  113 bits (282), Expect = 3e-23
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
 Frame = +1

Query: 10  SPVSDEDLFISVITQLGPEYKAVTAALRLRETPISFDDLFDRLIDAENQLKKEQVDTQTD 189
           +P+S+E+L + ++T LGP+++ ++AA+R R++ IS+ +L+++L+D E  +K E+      
Sbjct: 154 APMSNEELIVKILTGLGPKFREISAAIRARDSAISYPELYEKLLDHELFIKHEEAKKPLL 213

Query: 190 SPVSPIPTANHTFSTYATRNTKPYPPKPIRPGAHQSAPNTST-YSTWRGPNKSRNQYTPP 366
           +P++                         +   H    NTS   S    PN ++++   P
Sbjct: 214 TPITAAIAQ--------------------QINMHPRQGNTSNRRSNANSPNTNQSRRAQP 253

Query: 367 FRTPNPASNNR----IYCHFCNRTTHQTKECRQLARFLREHSIQPTANYTSFSNSSSQPW 534
            R  N     R    + C  C+R  H  K CR  +    +H IQ  ANY + S +   PW
Sbjct: 254 SRAGNNNQQQRYDHTLKCQLCDRLGHSAKVCRSQS---HDH-IQARANYAARSPTQQAPW 309

Query: 535 LFDTGASHHVTSDPSNLTTYSDYGGPDEITLGDGS 639
           + DTGA+HH+ S+  N T    Y GP+EI +GDG+
Sbjct: 310 IVDTGATHHMASNAQNFTDVHTYHGPEEIAMGDGN 344


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  110 bits (275), Expect = 2e-22
 Identities = 78/229 (34%), Positives = 108/229 (47%), Gaps = 21/229 (9%)
 Frame = +1

Query: 16  VSDEDLFISVITQLGPEYKAVTAALRLRETPISFDDLFDRLIDAENQLKKEQVDTQTDSP 195
           V DEDL   ++  LG +YK +  A++ R+TPISFD+L ++L++ E  L+      Q+  P
Sbjct: 47  VDDEDLLEKILEGLGEDYKELVRAVQARDTPISFDELHEKLLNFEASLQSTTKTEQSYFP 106

Query: 196 VSPIPTANHTFSTYATRNTKPYPPKPIRPGAHQSAPNTSTYST--WRGPNKSRNQYTPPF 369
            S  P AN  +S   +RN  PY             P+    ST  WR  + S N++  P 
Sbjct: 107 ASANP-ANRAYS--GSRNL-PYSNSSSGNNTGWRPPSNPGNSTTGWRPSSTSGNRFPTPT 162

Query: 370 RTPNPASNNRI------YCHFCNRTTHQTKECRQLARFLREHSIQPTANYTSFSNSSSQP 531
              N  S+         YC  C    H TK C        E S   T   T+  NSS QP
Sbjct: 163 GANNLRSDRSSPKPYLGYCQICRNQGHTTKRCPSFRLIPIETS---TNTSTATPNSSCQP 219

Query: 532 -------------WLFDTGASHHVTSDPSNLTTYSDYGGPDEITLGDGS 639
                        WL D+GASHH+TSD SNL+ ++ Y G D+I + DG+
Sbjct: 220 KAHFAANTSNTPTWLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGT 268


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