BLASTX nr result

ID: Bupleurum21_contig00027353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027353
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271526.1| PREDICTED: ethylene-responsive transcription...   174   1e-41
ref|XP_002509918.1| DNA binding protein, putative [Ricinus commu...   166   2e-39
ref|XP_004161474.1| PREDICTED: ethylene-responsive transcription...   163   1e-38
ref|XP_004143957.1| PREDICTED: ethylene-responsive transcription...   163   1e-38
ref|XP_002301396.1| AP2/ERF domain-containing transcription fact...   157   1e-36

>ref|XP_002271526.1| PREDICTED: ethylene-responsive transcription factor CRF2 [Vitis
           vinifera]
          Length = 327

 Score =  174 bits (440), Expect = 1e-41
 Identities = 97/172 (56%), Positives = 122/172 (70%), Gaps = 14/172 (8%)
 Frame = -3

Query: 539 VHEITIESCSSQNSTDA-VETAPAKSNRRKKVTEKSKPAAKLS----SSGKKYRGVRQRP 375
           V+EITI+SCS +NS    V  + +  N RKK T K +  A       S+GKK+RGVRQRP
Sbjct: 67  VNEITIQSCSGENSDGTTVWRSRSARNGRKKSTGKGEAQAVRQLAKPSTGKKFRGVRQRP 126

Query: 374 WGKWAAEIRDPMRRVRLWLGTYDTAEEAAMVYDHAAIKLRGPDALTNFTTPVPENQKK-P 198
           WGKWAAEIRDP+RRVRLWLGTYDTAEEAAMVYD+AAI+LRGPDALTNF +P    + K  
Sbjct: 127 WGKWAAEIRDPLRRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFASPPAVTKPKIE 186

Query: 197 PAPVTCSDYNSGEDSNNSLRSPKSVLRFVTDESNND--------ESESTQCP 66
           P  VTCS  +SGE+S+N+L SP SVLR++ +E+ +         ++ ST+ P
Sbjct: 187 PVTVTCS--SSGEESHNNLCSPTSVLRYINEEAESQGPIPETPKQTRSTELP 236


>ref|XP_002509918.1| DNA binding protein, putative [Ricinus communis]
           gi|223549817|gb|EEF51305.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 313

 Score =  166 bits (420), Expect = 2e-39
 Identities = 103/188 (54%), Positives = 128/188 (68%), Gaps = 12/188 (6%)
 Frame = -3

Query: 539 VHEITIES-CSSQNSTDAVETAPAK-SNRRKKVTEKSKPAAKL-----SSSGKKYRGVRQ 381
           V+EITIES CSS N  D V T+  K +NRRK   EKS P++ L     ++ GKK+RGVRQ
Sbjct: 62  VNEITIESSCSSPN--DVVFTSKCKKANRRKFSAEKSSPSSILPVKNTTTVGKKFRGVRQ 119

Query: 380 RPWGKWAAEIRDPMRRVRLWLGTYDTAEEAAMVYDHAAIKLRGPDALTNFTTPVPENQKK 201
           RPWGKWAAEIRDP+RRVRLWLGTYDTAEEAA+VYD+AAI+LRG DALTNF TP P    +
Sbjct: 120 RPWGKWAAEIRDPLRRVRLWLGTYDTAEEAAIVYDNAAIQLRGSDALTNFITP-PAKLSE 178

Query: 200 PPAPVTCSDYNSGEDSNNSLRSPKSVLRFVTDESNNDESES-----TQCPVNTIQELNDT 36
           P         NSGE+S N + SP SVLRF +  S+N+E+ES     +    N I+++ + 
Sbjct: 179 PS--------NSGEESQN-VCSPISVLRFPSSTSSNEEAESQGAVFSSKENNEIRDMKEE 229

Query: 35  DHIFTRFS 12
             +   FS
Sbjct: 230 SSVSENFS 237


>ref|XP_004161474.1| PREDICTED: ethylene-responsive transcription factor CRF2-like
           [Cucumis sativus]
          Length = 318

 Score =  163 bits (413), Expect = 1e-38
 Identities = 89/147 (60%), Positives = 109/147 (74%), Gaps = 6/147 (4%)
 Frame = -3

Query: 539 VHEITIE-SCSSQN-----STDAVETAPAKSNRRKKVTEKSKPAAKLSSSGKKYRGVRQR 378
           V+EI+IE SCS +      S  +  T   +S  +  V  +++ +AK+S+ GKK+RGVRQR
Sbjct: 63  VNEISIEPSCSGEGNRIWGSNRSARTGQRRSTGKCGVPSRNRRSAKVST-GKKFRGVRQR 121

Query: 377 PWGKWAAEIRDPMRRVRLWLGTYDTAEEAAMVYDHAAIKLRGPDALTNFTTPVPENQKKP 198
           PWGKWAAEIRDP+RRVRLWLGTYDTAEEAAMVYD+AAI+LRGPDALTNFTT     Q+  
Sbjct: 122 PWGKWAAEIRDPLRRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFTT-----QQSK 176

Query: 197 PAPVTCSDYNSGEDSNNSLRSPKSVLR 117
                CS YNSGE+SNN++ SP SVLR
Sbjct: 177 SFEEKCSGYNSGEESNNNICSPTSVLR 203


>ref|XP_004143957.1| PREDICTED: ethylene-responsive transcription factor CRF2-like
           [Cucumis sativus]
          Length = 318

 Score =  163 bits (413), Expect = 1e-38
 Identities = 89/147 (60%), Positives = 109/147 (74%), Gaps = 6/147 (4%)
 Frame = -3

Query: 539 VHEITIE-SCSSQN-----STDAVETAPAKSNRRKKVTEKSKPAAKLSSSGKKYRGVRQR 378
           V+EI+IE SCS +      S  +  T   +S  +  V  +++ +AK+S+ GKK+RGVRQR
Sbjct: 63  VNEISIEPSCSGEGNRIWGSNRSARTGQRRSTGKCGVPSRNRRSAKVST-GKKFRGVRQR 121

Query: 377 PWGKWAAEIRDPMRRVRLWLGTYDTAEEAAMVYDHAAIKLRGPDALTNFTTPVPENQKKP 198
           PWGKWAAEIRDP+RRVRLWLGTYDTAEEAAMVYD+AAI+LRGPDALTNFTT     Q+  
Sbjct: 122 PWGKWAAEIRDPLRRVRLWLGTYDTAEEAAMVYDNAAIQLRGPDALTNFTT-----QQSK 176

Query: 197 PAPVTCSDYNSGEDSNNSLRSPKSVLR 117
                CS YNSGE+SNN++ SP SVLR
Sbjct: 177 SFEEKCSGYNSGEESNNNICSPTSVLR 203


>ref|XP_002301396.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222843122|gb|EEE80669.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 305

 Score =  157 bits (397), Expect = 1e-36
 Identities = 82/155 (52%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
 Frame = -3

Query: 539 VHEITIESCSSQNSTDAVETAPAKSNRRKKVTEKSKPAAKLSSSGKKYRGVRQRPWGKWA 360
           ++EI I SC S  + +  + +    +R++ V + S+        GK+YRGVRQRPWG+WA
Sbjct: 61  INEIRITSCGSDRAAEDAKKSSKVVSRQQVVKKISRDQCSYPG-GKRYRGVRQRPWGRWA 119

Query: 359 AEIRDPMRRVRLWLGTYDTAEEAAMVYDHAAIKLRGPDALTNFTTPVPENQKKPPAP--V 186
           AEIRDP RR RLWLGTYDTAEEAAMVYD AAI+++GPDA TNFT P    Q  P     V
Sbjct: 120 AEIRDPYRRTRLWLGTYDTAEEAAMVYDQAAIRIKGPDAQTNFTQPPVSKQHAPDVDINV 179

Query: 185 TCSDYNSGEDSNNSLRSPKSVLRFVTDESNNDESE 81
             S Y SG++S+NSL SP SVLRF + E    ES+
Sbjct: 180 NISGYESGKESHNSLCSPTSVLRFQSTEEPGPESQ 214


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