BLASTX nr result

ID: Bupleurum21_contig00027343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027343
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34587.3| unnamed protein product [Vitis vinifera]              189   6e-46
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...   189   6e-46
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...   189   6e-46
ref|XP_004146135.1| PREDICTED: mediator of RNA polymerase II tra...   188   1e-45
ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45

>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  189 bits (479), Expect = 6e-46
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +3

Query: 3   LVLELDNLSKLSENCNIDIPMEVLNLIDDGKNPDEFTRDVLNSCIVKNQMTKGKADAFKD 182
           LV ELDN++KLSE CNI +PMEVLNLID+GKNPDEFTRDVLNSCI KNQ+TKGK D+FK 
Sbjct: 173 LVSELDNMTKLSEKCNIQVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKG 232

Query: 183 LRKHLLEELEQSFPDEVESYREIRAASATESKRLSEAQSLLPNGDVKVKPE 335
           LR+HLLEELEQ+FPDEVESYREIRAASA ESKRL++AQS+LPNGD+KVK E
Sbjct: 233 LRRHLLEELEQAFPDEVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTE 283


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
           putative [Ricinus communis]
          Length = 187

 Score =  189 bits (479), Expect = 6e-46
 Identities = 92/111 (82%), Positives = 101/111 (90%)
 Frame = +3

Query: 3   LVLELDNLSKLSENCNIDIPMEVLNLIDDGKNPDEFTRDVLNSCIVKNQMTKGKADAFKD 182
           LVLELD ++KLSE CNI +P+EVLNLIDDGKNPDEFTRDV+NSCI KNQ+TKGK DAFK 
Sbjct: 76  LVLELDKMAKLSEKCNIQVPLEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKG 135

Query: 183 LRKHLLEELEQSFPDEVESYREIRAASATESKRLSEAQSLLPNGDVKVKPE 335
           LRKHLLEELEQ+FPDEVESYREIRA SA ESKRL++AQS LPNGDVKVK E
Sbjct: 136 LRKHLLEELEQAFPDEVESYREIRAISAAESKRLAQAQSSLPNGDVKVKSE 186


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
           [Vitis vinifera]
          Length = 194

 Score =  189 bits (479), Expect = 6e-46
 Identities = 91/111 (81%), Positives = 103/111 (92%)
 Frame = +3

Query: 3   LVLELDNLSKLSENCNIDIPMEVLNLIDDGKNPDEFTRDVLNSCIVKNQMTKGKADAFKD 182
           LV ELDN++KLSE CNI +PMEVLNLID+GKNPDEFTRDVLNSCI KNQ+TKGK D+FK 
Sbjct: 83  LVSELDNMTKLSEKCNIQVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKG 142

Query: 183 LRKHLLEELEQSFPDEVESYREIRAASATESKRLSEAQSLLPNGDVKVKPE 335
           LR+HLLEELEQ+FPDEVESYREIRAASA ESKRL++AQS+LPNGD+KVK E
Sbjct: 143 LRRHLLEELEQAFPDEVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTE 193


>ref|XP_004146135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           10b-like [Cucumis sativus]
          Length = 189

 Score =  188 bits (477), Expect = 1e-45
 Identities = 92/111 (82%), Positives = 101/111 (90%)
 Frame = +3

Query: 3   LVLELDNLSKLSENCNIDIPMEVLNLIDDGKNPDEFTRDVLNSCIVKNQMTKGKADAFKD 182
           LVLELDN+ KLSE C I +PMEVLNLIDDGKNPDEFTRDVLNSCI KNQ TKGK DAFK 
Sbjct: 78  LVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKG 137

Query: 183 LRKHLLEELEQSFPDEVESYREIRAASATESKRLSEAQSLLPNGDVKVKPE 335
           LRKHLLEELEQ+FPDEVESYREIRAASA E+KR+++AQS+LPNGD+KVK E
Sbjct: 138 LRKHLLEELEQTFPDEVESYREIRAASAAEAKRIAQAQSMLPNGDMKVKME 188


>ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  187 bits (474), Expect = 2e-45
 Identities = 91/111 (81%), Positives = 100/111 (90%)
 Frame = +3

Query: 3   LVLELDNLSKLSENCNIDIPMEVLNLIDDGKNPDEFTRDVLNSCIVKNQMTKGKADAFKD 182
           LV ELDN+ KLSE CNI +PMEVLNLIDDGKNPDEF+RDV+NSCI KNQ+TKGK DAFK 
Sbjct: 79  LVTELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFSRDVINSCIAKNQVTKGKTDAFKS 138

Query: 183 LRKHLLEELEQSFPDEVESYREIRAASATESKRLSEAQSLLPNGDVKVKPE 335
           LRKHLLEELEQ+FPDEVESYREIRA SA E+KRL++AQS LPNGDVKVK E
Sbjct: 139 LRKHLLEELEQTFPDEVESYREIRAMSAAEAKRLAQAQSSLPNGDVKVKAE 189


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