BLASTX nr result

ID: Bupleurum21_contig00027333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027333
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]      202   2e-50
gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]      165   4e-39
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
emb|CBI27170.3| unnamed protein product [Vitis vinifera]              104   7e-21
gb|ABK95033.1| unknown [Populus trichocarpa]                          104   9e-21

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score =  202 bits (515), Expect = 2e-50
 Identities = 95/123 (77%), Positives = 103/123 (83%)
 Frame = +2

Query: 2   AKELSIVWGDDSRYWKWVSITDPVSCKALDVAELIEVCWLQVDGKYNASNLIKGIKYGVY 181
           AKELSIVWG D RYWKWVS T PV+ +ALD AELIEVCWLQ+DG YNA NL KG+KYGVY
Sbjct: 32  AKELSIVWGSDPRYWKWVSKTSPVNFEALDAAELIEVCWLQIDGTYNARNLNKGVKYGVY 91

Query: 182 FCVELKDNLCMNGPVTLKLTRPDGSSEVTTEDLQTKPRNTWVGLKVGEFANTSCGCNNTV 361
           F VEL  N CMNGPVTLKLTRP+GS E   EDLQTKPRN WVGLKVGEF NT+ GC+NTV
Sbjct: 92  FVVELNSNPCMNGPVTLKLTRPNGSPEEHKEDLQTKPRNKWVGLKVGEFTNTASGCDNTV 151

Query: 362 EFS 370
           +FS
Sbjct: 152 KFS 154


>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/123 (63%), Positives = 96/123 (78%)
 Frame = +2

Query: 2   AKELSIVWGDDSRYWKWVSITDPVSCKALDVAELIEVCWLQVDGKYNASNLIKGIKYGVY 181
           AKELSIVWG DSRYW   + T P S +++DV+ELIEVCWLQ+DGKY+AS L +G+KYGVY
Sbjct: 35  AKELSIVWGSDSRYWTTATETAPNSNQSVDVSELIEVCWLQIDGKYSASKLNQGVKYGVY 94

Query: 182 FCVELKDNLCMNGPVTLKLTRPDGSSEVTTEDLQTKPRNTWVGLKVGEFANTSCGCNNTV 361
           F V+LK NL +NG VTLKLTRPDG + VT +DL  +P+NTWV LKVGEF   +  C+  V
Sbjct: 95  FIVKLKTNLRLNGKVTLKLTRPDGRTVVTRDDLDKRPKNTWVALKVGEFMTNARTCHRNV 154

Query: 362 EFS 370
           +FS
Sbjct: 155 KFS 157


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = +2

Query: 2   AKELSIVWGDDSRYWKWVSITDPVSCKALDVAELIEVCWLQVDGKYNASNLIKGIKYGVY 181
           AK+LSI WG D+RYWKW SI +      +DVAEL++VCWL++ GK+N   L  GI Y V 
Sbjct: 135 AKDLSITWGGDARYWKWPSICESGDV-TVDVAELLDVCWLEIYGKFNTKMLSPGILYEVV 193

Query: 182 FCVELKDNLCMNG-PVTLKLTRPDGSSEVTTEDLQTKPRNTWVGLKVGEF 328
           F ++LKD     G PV + L  P+G  +   E LQTKPR  W+ + VGEF
Sbjct: 194 FVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPVGEF 243


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  104 bits (260), Expect = 7e-21
 Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   AKELSIVWGDDSRYWKWVSITDPVSCKALDVAELIEVCWLQVDGKYNASNLIKGIKYGVY 181
           A+ LSI W +DSRYW W+ I +  S   +DVAELI VCWL+V GK+  + L  GI Y V 
Sbjct: 94  ARNLSITWAEDSRYWHWLKIKE-TSDVFVDVAELINVCWLEVHGKFETAKLSPGIMYKVA 152

Query: 182 FCVELKDNLCMNG-PVTLKLTRPDGSSEVTTEDLQTKPRNTWVGLKVGEFANTSCGCNNT 358
           F V +KD     G PV LKL  PDG+++   E+L+ KP+  W+ + VG+F  TS      
Sbjct: 153 FVVMMKDPAYGWGVPVNLKLALPDGNTQEHKENLREKPKGQWIEIPVGQF-QTSAENIGE 211

Query: 359 VEFS 370
           +EFS
Sbjct: 212 IEFS 215


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   AKELSIVWGDDSRYWKWVSITDPVSCKALDVAELIEVCWLQVDGKYNASNLIKGIKYGVY 181
           AK+LSI WG D+RYWKW SI +      +DVAEL++VCWL++ GK+N   L  GI Y V 
Sbjct: 135 AKDLSITWGGDTRYWKWPSICESGDV-TVDVAELLDVCWLEIYGKFNTKMLSPGILYEVV 193

Query: 182 FCVELKDNLCMNG-PVTLKLTRPDGSSEVTTEDLQTKPRNTWVGLKVGE 325
           F ++LKD     G PV + L  P+G  +   E LQTKPR  W+ + VGE
Sbjct: 194 FVIKLKDPAYGWGVPVNVSLVLPNGYKQERKEKLQTKPREQWIEVPVGE 242


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