BLASTX nr result

ID: Bupleurum21_contig00027304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027304
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273082.1| PREDICTED: sorting and assembly machinery co...   402   e-110
emb|CBI25445.3| unnamed protein product [Vitis vinifera]              402   e-110
ref|XP_002312173.1| predicted protein [Populus trichocarpa] gi|1...   393   e-107
ref|XP_004140074.1| PREDICTED: sorting and assembly machinery co...   392   e-107
ref|XP_003552272.1| PREDICTED: sorting and assembly machinery co...   390   e-106

>ref|XP_002273082.1| PREDICTED: sorting and assembly machinery component 50 homolog B-like
            [Vitis vinifera]
          Length = 534

 Score =  402 bits (1033), Expect = e-110
 Identities = 194/273 (71%), Positives = 226/273 (82%), Gaps = 1/273 (0%)
 Frame = -3

Query: 1095 HNLAYNLYWRTLTDPSQMASRSVRSQLGHSLSSVLKYTFKIDKRNSSLRPTSGYAFVSTT 916
            H+L YNL WRTLTDPSQM+SR+VR QLGH L S LKYTF+ID RNS LRPT GYAF+ST+
Sbjct: 261  HDLTYNLLWRTLTDPSQMSSRAVRRQLGHGLLSSLKYTFRIDNRNSVLRPTQGYAFISTS 320

Query: 915  QIGGLSPDYRCSRFLRQEFDLRCAVPLGFYNAALNFGIGAGVLFPWGSGFRNKPSSLLDR 736
            QIGGL PDYR  RFLRQE DLRCA+PLGFY  ALN GI  GV+FPWG+G  + PSSL +R
Sbjct: 321  QIGGLVPDYRSLRFLRQEIDLRCAIPLGFYRTALNLGISGGVIFPWGNGALSMPSSLPER 380

Query: 735  FFLGGNSSPVCTLGGPTSVLGFKTRGLGPTEPRRRVKD-DNESSDSYPGTDYLGGDLALT 559
            FFLGGNSSPVCTLGGPT++LGFK+RGLGPTE RR ++D  N  +    G D +GGDLA+T
Sbjct: 381  FFLGGNSSPVCTLGGPTTLLGFKSRGLGPTERRRLIRDKSNGENSETSGRDVIGGDLAVT 440

Query: 558  AFADLSFDLPLRVLREAGIHGHIFASAGSLTKLTENAYKDLSVKKFRDSFRSSIGCGIIV 379
            AFADLSFDLPL++ R+AGIHGH+FA AG+LTKLTEN ++  S +KF DSFRSS G GIIV
Sbjct: 441  AFADLSFDLPLKLFRDAGIHGHVFACAGNLTKLTENEFRKFSFQKFLDSFRSSAGFGIIV 500

Query: 378  PTKIFRMEVNYCHILKQHGLDRGKTGVQFNFSS 280
            PTK+FRMEVNYC+ILKQ   D G+TGVQF+FS+
Sbjct: 501  PTKLFRMEVNYCYILKQFEHDHGRTGVQFSFSA 533


>emb|CBI25445.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  402 bits (1033), Expect = e-110
 Identities = 194/273 (71%), Positives = 226/273 (82%), Gaps = 1/273 (0%)
 Frame = -3

Query: 1095 HNLAYNLYWRTLTDPSQMASRSVRSQLGHSLSSVLKYTFKIDKRNSSLRPTSGYAFVSTT 916
            H+L YNL WRTLTDPSQM+SR+VR QLGH L S LKYTF+ID RNS LRPT GYAF+ST+
Sbjct: 191  HDLTYNLLWRTLTDPSQMSSRAVRRQLGHGLLSSLKYTFRIDNRNSVLRPTQGYAFISTS 250

Query: 915  QIGGLSPDYRCSRFLRQEFDLRCAVPLGFYNAALNFGIGAGVLFPWGSGFRNKPSSLLDR 736
            QIGGL PDYR  RFLRQE DLRCA+PLGFY  ALN GI  GV+FPWG+G  + PSSL +R
Sbjct: 251  QIGGLVPDYRSLRFLRQEIDLRCAIPLGFYRTALNLGISGGVIFPWGNGALSMPSSLPER 310

Query: 735  FFLGGNSSPVCTLGGPTSVLGFKTRGLGPTEPRRRVKD-DNESSDSYPGTDYLGGDLALT 559
            FFLGGNSSPVCTLGGPT++LGFK+RGLGPTE RR ++D  N  +    G D +GGDLA+T
Sbjct: 311  FFLGGNSSPVCTLGGPTTLLGFKSRGLGPTERRRLIRDKSNGENSETSGRDVIGGDLAVT 370

Query: 558  AFADLSFDLPLRVLREAGIHGHIFASAGSLTKLTENAYKDLSVKKFRDSFRSSIGCGIIV 379
            AFADLSFDLPL++ R+AGIHGH+FA AG+LTKLTEN ++  S +KF DSFRSS G GIIV
Sbjct: 371  AFADLSFDLPLKLFRDAGIHGHVFACAGNLTKLTENEFRKFSFQKFLDSFRSSAGFGIIV 430

Query: 378  PTKIFRMEVNYCHILKQHGLDRGKTGVQFNFSS 280
            PTK+FRMEVNYC+ILKQ   D G+TGVQF+FS+
Sbjct: 431  PTKLFRMEVNYCYILKQFEHDHGRTGVQFSFSA 463


>ref|XP_002312173.1| predicted protein [Populus trichocarpa] gi|118486263|gb|ABK94973.1|
            unknown [Populus trichocarpa] gi|222851993|gb|EEE89540.1|
            predicted protein [Populus trichocarpa]
          Length = 519

 Score =  393 bits (1009), Expect = e-107
 Identities = 184/274 (67%), Positives = 227/274 (82%)
 Frame = -3

Query: 1098 NHNLAYNLYWRTLTDPSQMASRSVRSQLGHSLSSVLKYTFKIDKRNSSLRPTSGYAFVST 919
            NH++ YNL WRTLTDPS+ AS SVR QLGH L S LKYTFKID+RNS LRPT G+AFVST
Sbjct: 245  NHDVVYNLAWRTLTDPSRTASSSVRGQLGHGLLSSLKYTFKIDRRNSPLRPTRGFAFVST 304

Query: 918  TQIGGLSPDYRCSRFLRQEFDLRCAVPLGFYNAALNFGIGAGVLFPWGSGFRNKPSSLLD 739
            TQIGGL+PD R  RFLRQE DLRCA+PLGFY++ALN GI AGV+FPWGSGF + PS L +
Sbjct: 305  TQIGGLAPDSRSLRFLRQELDLRCAIPLGFYHSALNLGISAGVVFPWGSGFSSMPSPLPE 364

Query: 738  RFFLGGNSSPVCTLGGPTSVLGFKTRGLGPTEPRRRVKDDNESSDSYPGTDYLGGDLALT 559
            RFFLGGN SPVCTLGGPTS+ GF+T+GLGPTEPRR+++++    ++  G DYLGGDLA+ 
Sbjct: 365  RFFLGGNLSPVCTLGGPTSLWGFRTKGLGPTEPRRQLQNNPADENADSGRDYLGGDLAVA 424

Query: 558  AFADLSFDLPLRVLREAGIHGHIFASAGSLTKLTENAYKDLSVKKFRDSFRSSIGCGIIV 379
            AFAD SFD P + L   GIHGH+FASAG++ KLTEN+Y++ S++KF  SFRSS+G G+++
Sbjct: 425  AFADFSFDFPSKWLSAKGIHGHLFASAGNVDKLTENSYRNFSLQKFTQSFRSSVGVGVVI 484

Query: 378  PTKIFRMEVNYCHILKQHGLDRGKTGVQFNFSSP 277
            PT +FRME+NYC+ILK+ G DRGK+G + +FSSP
Sbjct: 485  PTNLFRMELNYCNILKKFGEDRGKSGFRVSFSSP 518


>ref|XP_004140074.1| PREDICTED: sorting and assembly machinery component 50 homolog
            [Cucumis sativus] gi|449490420|ref|XP_004158600.1|
            PREDICTED: sorting and assembly machinery component 50
            homolog [Cucumis sativus]
          Length = 536

 Score =  392 bits (1008), Expect = e-107
 Identities = 186/275 (67%), Positives = 234/275 (85%), Gaps = 2/275 (0%)
 Frame = -3

Query: 1095 HNLAYNLYWRTLTDPSQMASRSVRSQLGHSLSSVLKYTFKIDKRNSSLRPTSGYAFVSTT 916
            H+L YNL WRT+TDPSQMAS SVR QLG+SL S LKYTFK+DKRNS++RPT GYAFVST+
Sbjct: 262  HDLGYNLGWRTITDPSQMASNSVRRQLGNSLLSSLKYTFKVDKRNSAVRPTRGYAFVSTS 321

Query: 915  QIGGLSPDYRCSRFLRQEFDLRCAVPLGFYNAALNFGIGAGVLFPWGSGFRNKPSSLLDR 736
            Q+GGL+PD+R  RF+RQEFDLR A+P GF  AA+NFG+ AGV+FPWG+GF NKPSSL +R
Sbjct: 322  QVGGLAPDHRSLRFVRQEFDLRYAIPFGFDRAAMNFGVSAGVVFPWGNGFLNKPSSLPER 381

Query: 735  FFLGGNSSPVCTLGGPTSVLGFKTRGLGPTEPRRRVKDDN--ESSDSYPGTDYLGGDLAL 562
            FFLGG+ SPVCT+GGPT+V GFKTRG+GPTEPRR V+D+N  +++DS  G D++GGDLA+
Sbjct: 382  FFLGGDFSPVCTIGGPTTVWGFKTRGMGPTEPRREVRDENKDDNNDSL-GRDFVGGDLAV 440

Query: 561  TAFADLSFDLPLRVLREAGIHGHIFASAGSLTKLTENAYKDLSVKKFRDSFRSSIGCGII 382
            TAFADLSFDLP+R LRE GIHGHIFA AG+L KLTEN ++  S +KF ++FR+S+G G++
Sbjct: 441  TAFADLSFDLPIRWLREHGIHGHIFAGAGNLAKLTENEFRSFSFQKFMETFRTSVGVGVV 500

Query: 381  VPTKIFRMEVNYCHILKQHGLDRGKTGVQFNFSSP 277
            VPT++FR+E N+ +ILKQ   DRGKTG +F+ S+P
Sbjct: 501  VPTRLFRLEGNFYYILKQQEHDRGKTGFRFSISAP 535


>ref|XP_003552272.1| PREDICTED: sorting and assembly machinery component 50 homolog
            [Glycine max]
          Length = 530

 Score =  390 bits (1001), Expect = e-106
 Identities = 183/275 (66%), Positives = 225/275 (81%), Gaps = 1/275 (0%)
 Frame = -3

Query: 1098 NHNLAYNLYWRTLTDPSQMASRSVRSQLGHSLSSVLKYTFKIDKRNSSLRPTSGYAFVST 919
            +H+L Y L WRTLTDPSQM+SRS+R QLGH L S LKYTFKID+RNS +RPT+GYAF+ST
Sbjct: 255  HHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSPIRPTNGYAFLST 314

Query: 918  TQIGGLSPDYRCSRFLRQEFDLRCAVPLGFYNAALNFGIGAGVLFPWGSGFRNKPSSLLD 739
            T  GGL+PD+R  RFLRQEFD+RCA+P GFYN ALN GI AG +FPWG GF NKPS L +
Sbjct: 315  THFGGLTPDHRSLRFLRQEFDVRCAIPFGFYNTALNLGISAGAVFPWGHGFMNKPSPLPE 374

Query: 738  RFFLGGNSSPVCTLGGPTSVLGFKTRGLGPTEPRRRVKDD-NESSDSYPGTDYLGGDLAL 562
            RF+LGG+ SPVCTLGGP ++ GFKTRGLGPTEPRRR +D   + SD     D++GGDLA+
Sbjct: 375  RFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRRSRDGIIDDSDDSSRWDFIGGDLAV 434

Query: 561  TAFADLSFDLPLRVLREAGIHGHIFASAGSLTKLTENAYKDLSVKKFRDSFRSSIGCGII 382
            TAFADLSFDLP+R LR+ GIHGH+FA AG+  KLT+N YK  S +KF +SFR+S+GCG +
Sbjct: 435  TAFADLSFDLPIRWLRDHGIHGHVFAGAGNTAKLTQNEYKHFSPRKFLESFRTSVGCGFV 494

Query: 381  VPTKIFRMEVNYCHILKQHGLDRGKTGVQFNFSSP 277
            VPT++FR+E N+ +ILKQ+  DRGKTG +F+FS+P
Sbjct: 495  VPTRLFRLEGNFYYILKQNEHDRGKTGFRFSFSAP 529


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