BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027282
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   340   4e-91
ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   324   3e-86
ref|XP_002322993.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   298   1e-78
ref|XP_003616089.1| Pentatricopeptide repeat-containing protein ...   296   9e-78

>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  340 bits (872), Expect = 4e-91
 Identities = 158/271 (58%), Positives = 213/271 (78%)
 Frame = +2

Query: 2    IDHMEAVLQEMKTLNILPTLSTYNMLIGGYVTAWMWDSMEKTYVAMEASGIDPNIRTHML 181
            +DHMEA  +E+  LNI P +STYN LI GYVTAWMWD ME+ +  M+   I P++ T++L
Sbjct: 238  VDHMEATFRELMNLNISPNVSTYNNLIAGYVTAWMWDDMEQVFQLMKEGPIYPHLDTYLL 297

Query: 182  MLRGYAYSRNLKKMEEIYEQISHHVIQQKEFALIRAMICAYCGSISTDRVRKVEELLNLL 361
            MLRGYA+S N++KMEE+Y+ +  HV    E  LIR MICAYC S  TDR++K+EELL L+
Sbjct: 298  MLRGYAHSGNIEKMEEMYKLVQDHV-NVNEVPLIRTMICAYCKSSITDRIKKIEELLRLI 356

Query: 362  PKNDYKPWMNVLLMKLYAQEDMLDVMDSYINEAFKRKTNVTTVGIMRCVISSYFRGNAVD 541
            P+ +Y+PW+NVLL+K+YAQ+++L+ M++ I+EAFK +T +TTVGIMR +I+SYFR NAVD
Sbjct: 357  PEEEYRPWLNVLLIKVYAQQNLLEAMENKIDEAFKHETTITTVGIMRTIIASYFRCNAVD 416

Query: 542  KLAYFVKRAERAEWRICRSLYHCKMVMYSSQQRLSEMEGVLGEMRNVNIQPTKRTFLIMC 721
            +LA FVKRAE + WRICRSLYHCKMVMY+S++RL EME VL +M N N+  TK+TF+I+ 
Sbjct: 417  RLADFVKRAECSGWRICRSLYHCKMVMYASEKRLDEMESVLNDMENFNLGRTKKTFVILY 476

Query: 722  QAYIACGQKQKVDQVLGIMYTHGFGISRDTS 814
            +AY+ CG+K KV+QVLG+MY HG+ +    S
Sbjct: 477  KAYLMCGKKYKVEQVLGLMYKHGYEVPEGAS 507


>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
            [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
            protein product [Vitis vinifera]
          Length = 494

 Score =  324 bits (830), Expect = 3e-86
 Identities = 156/269 (57%), Positives = 202/269 (75%)
 Frame = +2

Query: 2    IDHMEAVLQEMKTLNILPTLSTYNMLIGGYVTAWMWDSMEKTYVAMEASGIDPNIRTHML 181
            +DHMEA  +E+K L + P +STYN +I GYVTAWMW+ ME T+  M+   I P+I TH+L
Sbjct: 223  VDHMEATFREIKELELSPNISTYNNIIAGYVTAWMWNRMEDTFRTMKEDNIQPDINTHLL 282

Query: 182  MLRGYAYSRNLKKMEEIYEQISHHVIQQKEFALIRAMICAYCGSISTDRVRKVEELLNLL 361
            MLRGYA+S NL+KMEE YE I  HV   KE  LIRAMICAYC S  TDRV K+  L+ L+
Sbjct: 283  MLRGYAHSGNLQKMEETYELIKGHV-NDKEIPLIRAMICAYCKSSITDRVEKIGALMKLI 341

Query: 362  PKNDYKPWMNVLLMKLYAQEDMLDVMDSYINEAFKRKTNVTTVGIMRCVISSYFRGNAVD 541
            P+N+Y+PW+NV+L+++YAQED ++ M++ INEAF+ KT+V T+ +MR +I++YFR NAVD
Sbjct: 342  PENEYRPWLNVMLIRVYAQEDWVEEMENSINEAFEHKTSVKTMRVMRSIIATYFRCNAVD 401

Query: 542  KLAYFVKRAERAEWRICRSLYHCKMVMYSSQQRLSEMEGVLGEMRNVNIQPTKRTFLIMC 721
            +LA FVKRAE   W ICRSLYHCKMVMY+SQ+RL EME VL EM + N   TK+TF I+ 
Sbjct: 402  RLANFVKRAECGGWHICRSLYHCKMVMYASQKRLEEMESVLNEMESSNFCCTKKTFWILY 461

Query: 722  QAYIACGQKQKVDQVLGIMYTHGFGISRD 808
            +AY    Q+ KV+QV G+M  HG+GI  D
Sbjct: 462  KAYSMWDQRHKVEQVKGLMCKHGYGIPSD 490


>ref|XP_002322993.1| predicted protein [Populus trichocarpa] gi|222867623|gb|EEF04754.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  315 bits (808), Expect = 1e-83
 Identities = 153/273 (56%), Positives = 201/273 (73%)
 Frame = +2

Query: 2   IDHMEAVLQEMKTLNILPTLSTYNMLIGGYVTAWMWDSMEKTYVAMEASGIDPNIRTHML 181
           +D MEA+ +EM+   I P L+TYN LI GYVT WMWDSMEKT+  M A  + P++ TH+L
Sbjct: 89  VDKMEAIFKEMEDSRISPNLTTYNNLISGYVTVWMWDSMEKTFQMMIAGPVKPDLNTHLL 148

Query: 182 MLRGYAYSRNLKKMEEIYEQISHHVIQQKEFALIRAMICAYCGSISTDRVRKVEELLNLL 361
           MLRGYA+S +L++ME +YE I  HV   +   LIRAMICAYC S   +RV+K+E L+ L+
Sbjct: 149 MLRGYAHSGHLEQMELVYELIKDHV-NARRLTLIRAMICAYCKSSIPERVQKIEALMRLI 207

Query: 362 PKNDYKPWMNVLLMKLYAQEDMLDVMDSYINEAFKRKTNVTTVGIMRCVISSYFRGNAVD 541
           P+ +Y+PW+NVLL+KLYA+ED L+ M++ INEAF  +  ++TV IM+ +I+SYFR NAVD
Sbjct: 208 PEKEYRPWLNVLLIKLYAEEDRLEGMENSINEAFNHRITISTVSIMQAIITSYFRCNAVD 267

Query: 542 KLAYFVKRAERAEWRICRSLYHCKMVMYSSQQRLSEMEGVLGEMRNVNIQPTKRTFLIMC 721
           KL  F+KRA  A WRI R L+HCKMVMY +Q+RL EME VL EM N N+  TK+TF I+ 
Sbjct: 268 KLTDFIKRATYARWRIIRPLFHCKMVMYGTQKRLDEMESVLIEMENCNLPRTKKTFWILY 327

Query: 722 QAYIACGQKQKVDQVLGIMYTHGFGISRDTSNL 820
           +AY+ CGQ  KV+QV G+M  HG+G   DTS L
Sbjct: 328 KAYLNCGQWYKVEQVAGLMCKHGYGNPFDTSPL 360


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g30780-like [Glycine max]
          Length = 442

 Score =  298 bits (764), Expect = 1e-78
 Identities = 143/266 (53%), Positives = 195/266 (73%)
 Frame = +2

Query: 2   IDHMEAVLQEMKTLNILPTLSTYNMLIGGYVTAWMWDSMEKTYVAMEASGIDPNIRTHML 181
           +DHMEA   E++ LN+   + TYN LI GY+TAWMWD MEK +  ++ S ++PN++TH+L
Sbjct: 172 VDHMEATFSEIQRLNLAMNICTYNHLIAGYITAWMWDDMEKVFQMLKLSSVEPNMKTHLL 231

Query: 182 MLRGYAYSRNLKKMEEIYEQISHHVIQQKEFALIRAMICAYCGSISTDRVRKVEELLNLL 361
           MLRGYA S NL+KMEE+Y  I  HV   KE +LIR MICAYC S   DR++K+E LL  +
Sbjct: 232 MLRGYANSGNLEKMEEMYSFIRDHV-NIKEISLIRCMICAYCRSSHADRLKKIELLLKFI 290

Query: 362 PKNDYKPWMNVLLMKLYAQEDMLDVMDSYINEAFKRKTNVTTVGIMRCVISSYFRGNAVD 541
           P+ +Y+PW+NVLL+KLYA+ED L  M++ INEAF+  T++TT GI+R +I++Y+R NAV+
Sbjct: 291 PQKEYRPWLNVLLIKLYAKEDWLAKMENAINEAFEHGTSITTKGILRRIIATYYRCNAVE 350

Query: 542 KLAYFVKRAERAEWRICRSLYHCKMVMYSSQQRLSEMEGVLGEMRNVNIQPTKRTFLIMC 721
           KL  FV+RAE + W ICRSLYHCK+VMY SQ  L EM  VL EM NV ++ +K+T  IM 
Sbjct: 351 KLENFVRRAEISGWSICRSLYHCKLVMYGSQMTLLEMHNVLEEMENVKLKCSKKTLWIMY 410

Query: 722 QAYIACGQKQKVDQVLGIMYTHGFGI 799
           +AY++ GQ   V + LG M+ HG+ +
Sbjct: 411 KAYMSRGQISMVLKTLGQMFKHGYEV 436


>ref|XP_003616089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355517424|gb|AES99047.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 552

 Score =  296 bits (757), Expect = 9e-78
 Identities = 137/268 (51%), Positives = 195/268 (72%)
 Frame = +2

Query: 5    DHMEAVLQEMKTLNILPTLSTYNMLIGGYVTAWMWDSMEKTYVAMEASGIDPNIRTHMLM 184
            DHMEA  +EM  L + P +STYN LIGGY++ WMW  ME+ +  + +  ++PN++T++LM
Sbjct: 284  DHMEATFKEMNELPLAPNISTYNYLIGGYISTWMWGDMERVFQVLNSGPVEPNVKTYLLM 343

Query: 185  LRGYAYSRNLKKMEEIYEQISHHVIQQKEFALIRAMICAYCGSISTDRVRKVEELLNLLP 364
            +RGYA+  NL+KME+IY  +  +V    +  +IR MICAYC S   D++ KV+ LL L+P
Sbjct: 344  IRGYAHLGNLEKMEKIYSLVKDNV---NDIPIIRVMICAYCKSSDADKMNKVKALLKLIP 400

Query: 365  KNDYKPWMNVLLMKLYAQEDMLDVMDSYINEAFKRKTNVTTVGIMRCVISSYFRGNAVDK 544
            + +Y+PW+NVLL+KLYA+E+ L+ MD+ INEAFKR+T VTT+GIMRC+I++YFR NA++ 
Sbjct: 401  EKEYRPWLNVLLIKLYAEENCLEEMDNAINEAFKRRTVVTTMGIMRCIITAYFRNNAIES 460

Query: 545  LAYFVKRAERAEWRICRSLYHCKMVMYSSQQRLSEMEGVLGEMRNVNIQPTKRTFLIMCQ 724
            L  F  R+  A WR+C SLYH K+VMY SQ+ L EM+ VL EM +VN+Q TK+T  IM +
Sbjct: 461  LEKFTIRSVLAGWRMCYSLYHSKLVMYGSQKNLREMQNVLEEMDSVNMQRTKKTLWIMYK 520

Query: 725  AYIACGQKQKVDQVLGIMYTHGFGISRD 808
            AY +CGQ+  V ++LG M+ HG  +  D
Sbjct: 521  AYWSCGQRSLVLKILGQMFKHGHEVPID 548