BLASTX nr result

ID: Bupleurum21_contig00027264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027264
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI23412.1| pectin methylesterase [Coffea arabica]                 120   1e-25
ref|XP_003602238.1| Pectinesterase [Medicago truncatula] gi|3554...   119   2e-25
ref|NP_190491.1| pectinesterase [Arabidopsis thaliana] gi|753118...   119   2e-25
gb|AAG40402.1|AF325050_1 AT3g49220 [Arabidopsis thaliana]             119   2e-25
ref|XP_002875955.1| pectinesterase family protein [Arabidopsis l...   119   3e-25

>gb|AFI23412.1| pectin methylesterase [Coffea arabica]
          Length = 355

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   EWNTTFALDTLYYGEYMNYGPGAGLSRRVKWPGYRILNTTAQADAFTVAQFLLGNSWLPS 182
           EWN TFALDTLYYGEYMNYGPGA L +RVKWPGYR++ T A+A  FTVAQF+ G+SWLPS
Sbjct: 285 EWNATFALDTLYYGEYMNYGPGAALGQRVKWPGYRVITTPAEASKFTVAQFIFGSSWLPS 344

Query: 183 TGVKYTAGL 209
           TGV + AGL
Sbjct: 345 TGVAFMAGL 353


>ref|XP_003602238.1| Pectinesterase [Medicago truncatula] gi|355491286|gb|AES72489.1|
           Pectinesterase [Medicago truncatula]
          Length = 599

 Score =  119 bits (299), Expect = 2e-25
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   EWNTTFALDTLYYGEYMNYGPGAGLSRRVKWPGYRILNTTAQADAFTVAQFLLGNSWLPS 182
           EWNTTFALDTLYYGEYMNYGPG  + +RVKWPGYR++ +T +A+ FTVAQF+ G++WLPS
Sbjct: 529 EWNTTFALDTLYYGEYMNYGPGGAIGQRVKWPGYRVITSTVEANRFTVAQFISGSTWLPS 588

Query: 183 TGVKYTAGL 209
           TGV Y AGL
Sbjct: 589 TGVAYVAGL 597


>ref|NP_190491.1| pectinesterase [Arabidopsis thaliana]
           gi|75311823|sp|Q9M3B0.1|PME34_ARATH RecName:
           Full=Probable pectinesterase/pectinesterase inhibitor
           34; Includes: RecName: Full=Pectinesterase inhibitor 34;
           AltName: Full=Pectin methylesterase inhibitor 34;
           Includes: RecName: Full=Pectinesterase 34; Short=PE 34;
           AltName: Full=Pectin methylesterase 34; Short=AtPME34
           gi|6723392|emb|CAB66401.1| pectinesterase-like protein
           [Arabidopsis thaliana] gi|16648929|gb|AAL24316.1|
           pectinesterase-like protein [Arabidopsis thaliana]
           gi|30725384|gb|AAP37714.1| At3g49220 [Arabidopsis
           thaliana] gi|110741469|dbj|BAE98692.1| pectinesterase
           like protein [Arabidopsis thaliana]
           gi|332644991|gb|AEE78512.1| pectinesterase [Arabidopsis
           thaliana]
          Length = 598

 Score =  119 bits (299), Expect = 2e-25
 Identities = 50/71 (70%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   EWNTTFALDTLYYGEYMNYGPGAGLSRRVKWPGYRILNTTAQADAFTVAQFLLGNSWLPS 182
           EWNTTFALDTLYYGEY+N GPG+GL +RV WPGYR++N+TA+A+ FTVA+F+ G+SWLPS
Sbjct: 528 EWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPS 587

Query: 183 TGVKYTAGLVV 215
           TGV + AGL +
Sbjct: 588 TGVSFLAGLSI 598


>gb|AAG40402.1|AF325050_1 AT3g49220 [Arabidopsis thaliana]
          Length = 144

 Score =  119 bits (299), Expect = 2e-25
 Identities = 50/71 (70%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   EWNTTFALDTLYYGEYMNYGPGAGLSRRVKWPGYRILNTTAQADAFTVAQFLLGNSWLPS 182
           EWNTTFALDTLYYGEY+N GPG+GL +RV WPGYR++N+TA+A+ FTVA+F+ G+SWLPS
Sbjct: 74  EWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPS 133

Query: 183 TGVKYTAGLVV 215
           TGV + AGL +
Sbjct: 134 TGVSFLAGLSI 144


>ref|XP_002875955.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321793|gb|EFH52214.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 598

 Score =  119 bits (298), Expect = 3e-25
 Identities = 50/71 (70%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   EWNTTFALDTLYYGEYMNYGPGAGLSRRVKWPGYRILNTTAQADAFTVAQFLLGNSWLPS 182
           EWNTTFALDTLYYGEY+N GPG+GL +RV WPGYR++N+TA+A+ FTVA+F+ G+SWLPS
Sbjct: 528 EWNTTFALDTLYYGEYLNSGPGSGLGQRVTWPGYRVINSTAEANRFTVAEFIYGSSWLPS 587

Query: 183 TGVKYTAGLVV 215
           TGV + AGL +
Sbjct: 588 TGVSFLAGLSI 598


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