BLASTX nr result

ID: Bupleurum21_contig00027249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027249
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
emb|CAN80797.1| hypothetical protein VITISV_002765 [Vitis vinifera]    70   2e-10
ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CBI21146.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002285540.1| PREDICTED: nuclear nucleic acid-binding prot...    69   4e-10

>ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|222855653|gb|EEE93200.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/39 (79%), Positives = 37/39 (94%)
 Frame = +3

Query: 285 AKATTTLFSLRLRCQGVHPDDHPVKTELERLSLFQDKLE 401
           AKAT+TLF+LRLR  G+HPD+HP+KTELERLSL+QDKLE
Sbjct: 61  AKATSTLFALRLRTTGIHPDEHPIKTELERLSLYQDKLE 99


>emb|CAN80797.1| hypothetical protein VITISV_002765 [Vitis vinifera]
          Length = 205

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/100 (42%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +3

Query: 105 MEG-VVPNSVIDSVNRTSKNIDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 281
           MEG VVP S ++SV RT  N+ +                                     
Sbjct: 1   MEGSVVPESAMESVGRTLANVKDMQTHLKDFLSLCDPQVIAQLPPLQRAQAHLTL----- 55

Query: 282 XAKATTTLFSLRLRCQGVHPDDHPVKTELERLSLFQDKLE 401
            AKATTTLF+L LRC+GV+PDDHP+K+ELERL L++DKLE
Sbjct: 56  -AKATTTLFALNLRCKGVNPDDHPIKSELERLRLYEDKLE 94


>ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|222866350|gb|EEF03481.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 285 AKATTTLFSLRLRCQGVHPDDHPVKTELERLSLFQDKLE 401
           AKAT+T+F+LRLR  G+HPD+HP+KTELERLSL+QDKLE
Sbjct: 61  AKATSTIFALRLRTTGIHPDEHPIKTELERLSLYQDKLE 99


>emb|CBI21146.3| unnamed protein product [Vitis vinifera]
          Length = 182

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 285 AKATTTLFSLRLRCQGVHPDDHPVKTELERLSLFQDKLE 401
           AKATTTLF+L LRC+GV+PDDHP+K+ELERL L++DKLE
Sbjct: 33  AKATTTLFALNLRCKGVNPDDHPIKSELERLRLYEDKLE 71


>ref|XP_002285540.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Vitis
           vinifera]
          Length = 205

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 285 AKATTTLFSLRLRCQGVHPDDHPVKTELERLSLFQDKLE 401
           AKATTTLF+L LRC+GV+PDDHP+K+ELERL L++DKLE
Sbjct: 56  AKATTTLFALNLRCKGVNPDDHPIKSELERLRLYEDKLE 94


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