BLASTX nr result

ID: Bupleurum21_contig00027243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027243
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26124.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    96   3e-18
ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206...    96   3e-18
ref|XP_002311805.1| chromatin remodeling complex subunit [Populu...    96   4e-18
ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...    93   3e-17

>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/87 (60%), Positives = 63/87 (72%)
 Frame = +2

Query: 2    VNDLIARSESEIDIFESIDKRRQEEEMAAWKLTLGERKNSSEPVLTLPSRLVTTEDLKSF 181
            +NDL+ARSESEIDIFESIDK+RQE EMA WK  +G+    + P   LPSRLVT +DLK F
Sbjct: 1556 LNDLLARSESEIDIFESIDKKRQEAEMATWKKLVGQGMELAPP---LPSRLVTDDDLKVF 1612

Query: 182  SEAMKIYDAPTPMDGSNVGIKRKSGYL 262
             +AMKIY+       SNVG+KRK  YL
Sbjct: 1613 YQAMKIYEESNAGVISNVGVKRKGEYL 1639


>ref|XP_004159854.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206586, partial
            [Cucumis sativus]
          Length = 2108

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2    VNDLIARSESEIDIFESIDKRRQEEEMAAW-KLTLGERKNSSEPVLTLPSRLVTTEDLKS 178
            +NDL+ARSESEID+FE++DK RQE EMA W KL LG     SEPV ++PSRLVT +DLK 
Sbjct: 1455 LNDLLARSESEIDVFETVDKERQEHEMATWKKLVLGH--GISEPVPSIPSRLVTDDDLKV 1512

Query: 179  FSEAMKI-YDAPTPMDGSNVGIKRKSGYL 262
            F E MKI  + P   + S+ G+KRKS YL
Sbjct: 1513 FYETMKITEEVPKAGEASHAGVKRKSEYL 1541


>ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206586, partial [Cucumis
            sativus]
          Length = 2086

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2    VNDLIARSESEIDIFESIDKRRQEEEMAAW-KLTLGERKNSSEPVLTLPSRLVTTEDLKS 178
            +NDL+ARSESEID+FE++DK RQE EMA W KL LG     SEPV ++PSRLVT +DLK 
Sbjct: 1456 LNDLLARSESEIDVFETVDKERQEHEMATWKKLVLGH--GISEPVPSIPSRLVTDDDLKV 1513

Query: 179  FSEAMKI-YDAPTPMDGSNVGIKRKSGYL 262
            F E MKI  + P   + S+ G+KRKS YL
Sbjct: 1514 FYETMKITEEVPKAGEASHAGVKRKSEYL 1542


>ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222851625|gb|EEE89172.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 3427

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2    VNDLIARSESEIDIFESIDKRRQEEEMAAWK-LTLGERKNSSEPVLTLPSRLVTTEDLKS 178
            +NDL+ARSESEID+FES+DK+RQ +EMA WK L LG+  ++ E    LPSRLVT +DLK+
Sbjct: 1576 LNDLLARSESEIDVFESVDKQRQAKEMATWKNLLLGQGMDALEHQPPLPSRLVTDDDLKA 1635

Query: 179  FSEAMKIYDAPTPMDGSNVGIKRK 250
            F +AM +YD P     SN G+KRK
Sbjct: 1636 FYKAMNLYDVPKAGVESNAGVKRK 1659


>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
            Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2    VNDLIARSESEIDIFESIDKRRQEEEMAAWK-LTLGERKNSSEPVLTLPSRLVTTEDLKS 178
            +ND++ARSE+E+D+FE++D+ R+E E+A WK L LG   + S+ +  LPSRLVT EDLK 
Sbjct: 1542 LNDVLARSEAELDVFEAVDRNRKESELATWKNLVLGHSADGSDVIPPLPSRLVTDEDLKQ 1601

Query: 179  FSEAMKIYDAPTPMDGSNVGIKRKSGYL 262
            F+EAMKIYD     +  + G+KRK G L
Sbjct: 1602 FNEAMKIYDDVPKGEIDSNGVKRKRGAL 1629


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