BLASTX nr result

ID: Bupleurum21_contig00027242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027242
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281568.1| PREDICTED: uncharacterized protein LOC100265...   187   1e-45
emb|CAN82374.1| hypothetical protein VITISV_027625 [Vitis vinifera]   187   1e-45
ref|XP_002313831.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002519148.1| ubiquitin-protein ligase, putative [Ricinus ...   177   1e-42
ref|NP_179934.2| Zinc-finger domain of monoamine-oxidase A repre...   177   1e-42

>ref|XP_002281568.1| PREDICTED: uncharacterized protein LOC100265793 [Vitis vinifera]
           gi|297741367|emb|CBI32498.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  187 bits (474), Expect = 1e-45
 Identities = 80/118 (67%), Positives = 97/118 (82%)
 Frame = -3

Query: 379 YDEDGQRMYDQYEGKHCHQCRQTTLGNHTKCSKCKAVEGQFCGDCLFTRYGENVVEANEN 200
           Y+++G+R+YDQ +GK CHQCRQ TLG  T CSKCK ++GQFCGDCL+ RYGENV+EAN+N
Sbjct: 156 YNKEGKRIYDQVKGKTCHQCRQKTLGYRTHCSKCKLIQGQFCGDCLYMRYGENVIEANKN 215

Query: 199 LSWICPNCRGICNCSRCRRAKGWEPTGDIYWKVKKLGFKSVAHYLIGTLRKQKIDQNP 26
            SWICP CRGICNCS CR+AKGW PTG +Y KV +LGFKSVAHYLI T R +   ++P
Sbjct: 216 PSWICPVCRGICNCSLCRQAKGWMPTGPMYKKVSELGFKSVAHYLIQTRRAKTSSEDP 273


>emb|CAN82374.1| hypothetical protein VITISV_027625 [Vitis vinifera]
          Length = 376

 Score =  187 bits (474), Expect = 1e-45
 Identities = 80/118 (67%), Positives = 97/118 (82%)
 Frame = -3

Query: 379 YDEDGQRMYDQYEGKHCHQCRQTTLGNHTKCSKCKAVEGQFCGDCLFTRYGENVVEANEN 200
           Y+++G+R+YDQ +GK CHQCRQ TLG  T CSKCK ++GQFCGDCL+ RYGENV+EAN+N
Sbjct: 156 YNKEGKRIYDQVKGKTCHQCRQKTLGYRTHCSKCKLIQGQFCGDCLYMRYGENVIEANKN 215

Query: 199 LSWICPNCRGICNCSRCRRAKGWEPTGDIYWKVKKLGFKSVAHYLIGTLRKQKIDQNP 26
            SWICP CRGICNCS CR+AKGW PTG +Y KV +LGFKSVAHYLI T R +   ++P
Sbjct: 216 PSWICPVCRGICNCSLCRQAKGWMPTGPMYKKVSELGFKSVAHYLIQTRRAKTSSEDP 273


>ref|XP_002313831.1| predicted protein [Populus trichocarpa] gi|222850239|gb|EEE87786.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  179 bits (454), Expect = 2e-43
 Identities = 78/110 (70%), Positives = 89/110 (80%)
 Frame = -3

Query: 373 EDGQRMYDQYEGKHCHQCRQTTLGNHTKCSKCKAVEGQFCGDCLFTRYGENVVEANENLS 194
           +DG+R+YD   G+ CHQCRQ TLG HT CSKC  V+GQFCGDCLF RYGENV+E N+N +
Sbjct: 171 KDGRRVYDPEMGETCHQCRQKTLGLHTHCSKCNLVQGQFCGDCLFMRYGENVIEVNQNPN 230

Query: 193 WICPNCRGICNCSRCRRAKGWEPTGDIYWKVKKLGFKSVAHYLIGTLRKQ 44
           WICP CRGICNCS CR AKGW PTG++Y KV +LGFKSVAHYLI T R Q
Sbjct: 231 WICPVCRGICNCSLCRHAKGWAPTGNLYRKVIRLGFKSVAHYLIQTRRAQ 280


>ref|XP_002519148.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223541811|gb|EEF43359.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 322

 Score =  177 bits (448), Expect = 1e-42
 Identities = 75/111 (67%), Positives = 88/111 (79%)
 Frame = -3

Query: 379 YDEDGQRMYDQYEGKHCHQCRQTTLGNHTKCSKCKAVEGQFCGDCLFTRYGENVVEANEN 200
           Y +DG+R+Y+  +G+ CHQCRQ TLG HT CSKC  V+G+FCGDCL+ RYGENV+E N N
Sbjct: 149 YGKDGKRIYNPEKGETCHQCRQKTLGRHTHCSKCNLVQGKFCGDCLYMRYGENVIEVNRN 208

Query: 199 LSWICPNCRGICNCSRCRRAKGWEPTGDIYWKVKKLGFKSVAHYLIGTLRK 47
            SWICP CRG CNCS C +A+GW PTG IY KV KLGFKSVAHYLI T R+
Sbjct: 209 PSWICPGCRGFCNCSLCWKARGWAPTGPIYRKVSKLGFKSVAHYLIQTQRE 259


>ref|NP_179934.2| Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis
           thaliana] gi|91806250|gb|ABE65853.1| unknown
           [Arabidopsis thaliana] gi|330252368|gb|AEC07462.1|
           Zinc-finger domain of monoamine-oxidase A repressor R1
           [Arabidopsis thaliana]
          Length = 552

 Score =  177 bits (448), Expect = 1e-42
 Identities = 76/122 (62%), Positives = 92/122 (75%)
 Frame = -3

Query: 379 YDEDGQRMYDQYEGKHCHQCRQTTLGNHTKCSKCKAVEGQFCGDCLFTRYGENVVEANEN 200
           YD++G+R+YD + GK CHQCRQ T+G+ T+CS+C  V+GQFCGDCLF RYGE+V+EA EN
Sbjct: 149 YDKNGKRIYDPFNGKTCHQCRQKTMGHRTQCSECNLVQGQFCGDCLFMRYGEHVLEALEN 208

Query: 199 LSWICPNCRGICNCSRCRRAKGWEPTGDIYWKVKKLGFKSVAHYLIGTLRKQKIDQNPAD 20
             WICP CRGICNCS CR  KGW PTG IY ++  LG+KSVAHYLI T R    D  P+ 
Sbjct: 209 PDWICPACRGICNCSLCRNNKGWVPTGPIYRRIAALGYKSVAHYLIQTKRAPTDDTTPSQ 268

Query: 19  GS 14
            S
Sbjct: 269 AS 270


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