BLASTX nr result

ID: Bupleurum21_contig00027241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027241
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524855.1| ATP binding protein, putative [Ricinus commu...   208   3e-55
ref|XP_002299348.1| tir-nbs-lrr resistance protein [Populus tric...   214   1e-53
gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Popu...   214   1e-53
gb|ABE99703.1| TIR-NBS-LRR disease resistance-like protein [Popu...   212   9e-53
gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Popu...   212   9e-53

>ref|XP_002524855.1| ATP binding protein, putative [Ricinus communis]
           gi|223535818|gb|EEF37479.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 673

 Score =  208 bits (529), Expect(2) = 3e-55
 Identities = 113/238 (47%), Positives = 163/238 (68%), Gaps = 3/238 (1%)
 Frame = -2

Query: 706 GIYGMGGLGKTTLAKALYNQLLGGRFKGSCFLSNVREVTGTTNGLISLQQQLFDDVLKSK 527
           GI+GMGG+GKTT+AKA++NQL  G F+  CFLSNV+E++   NGLI LQ+QL   VLK K
Sbjct: 224 GIHGMGGIGKTTIAKAVFNQLCDG-FEVRCFLSNVKEISEQPNGLIQLQEQLLRAVLKPK 282

Query: 526 NIVKVQNIDQGTKLIRDRVCSTKILVVIDDIDHYKQYESLVGP---FACGSVVIITTRDE 356
           ++ ++ ++D+G  +IR+R    ++LVVIDD+DH KQ+ +L+G    F  GS +IIT+RDE
Sbjct: 283 SL-QIGSVDRGINMIRERFRHKRLLVVIDDLDHMKQFNALMGDRTWFGLGSRLIITSRDE 341

Query: 355 EILDLIKVETRYRYMVNALDYAESLTLFTQHAFENAKPNNKFMVLSEDILRHAGGLPLAL 176
            +L  ++V+ +Y+  V  LD+ ESL LF+ HAF    P   ++ LS  ++ + GGLPLAL
Sbjct: 342 HLLAQLEVDEKYQ--VKELDHNESLELFSWHAFRKTHPVGDYVELSNGVVDYGGGLPLAL 399

Query: 175 EVYGSNLYDKSEARWKYFIEKLQRIPDNDIHKRLSISLDAIGTDDPLLKKMFLDIACF 2
           EV GS L  +S   W   + KL+RIP + I ++L +S D +  DD  +K +FLDIACF
Sbjct: 400 EVLGSYLCKRSIPEWTSALRKLKRIPHHQIQRKLRLSFDTL--DDDKVKDIFLDIACF 455



 Score = 33.9 bits (76), Expect(2) = 3e-55
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 806 LDVAKYPVGLDSRVKSITTLLS 741
           L+VAK+PVG+DSR+K +  LLS
Sbjct: 193 LNVAKHPVGIDSRIKDVIVLLS 214


>ref|XP_002299348.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222846606|gb|EEE84153.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 515

 Score =  214 bits (546), Expect = 1e-53
 Identities = 121/248 (48%), Positives = 169/248 (68%), Gaps = 3/248 (1%)
 Frame = -2

Query: 736 TDTEEGVIKFGIYGMGGLGKTTLAKALYNQLLGGRFKGSCFLSNVREVTGTTNGLISLQQ 557
           T T+E  I  GI+GM G+GKT++AK ++NQ    RF+GSCFLSN+ E +  +NGL+ LQ+
Sbjct: 193 TATDEVCI-VGIHGMPGIGKTSIAKVVFNQFCY-RFEGSCFLSNINETSEQSNGLVLLQE 250

Query: 556 QLFDDVLKSKNIVKVQNIDQGTKLIRDRVCSTKILVVIDDIDHYKQYESLVGP---FACG 386
           QL  D+LK +N V + N+ +G  LI++R+C  ++LVV+DD+ H  Q  +L+G    F  G
Sbjct: 251 QLLHDILK-QNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNALMGERSWFGPG 309

Query: 385 SVVIITTRDEEILDLIKVETRYRYMVNALDYAESLTLFTQHAFENAKPNNKFMVLSEDIL 206
           S VIITT+DE +L  +KV+  YR  V  L   ESL LF+ HAF + KP   ++ LS D++
Sbjct: 310 SRVIITTKDEHLL--LKVDRTYR--VEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVV 365

Query: 205 RHAGGLPLALEVYGSNLYDKSEARWKYFIEKLQRIPDNDIHKRLSISLDAIGTDDPLLKK 26
            + GGLPLALEV GS L  K+ ARWK  I+KL++IP+ +I K+L IS D++  DD  L+ 
Sbjct: 366 DYCGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKLRISFDSL--DDHQLQN 423

Query: 25  MFLDIACF 2
            FLDIACF
Sbjct: 424 TFLDIACF 431


>gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  214 bits (546), Expect = 1e-53
 Identities = 121/248 (48%), Positives = 169/248 (68%), Gaps = 3/248 (1%)
 Frame = -2

Query: 736 TDTEEGVIKFGIYGMGGLGKTTLAKALYNQLLGGRFKGSCFLSNVREVTGTTNGLISLQQ 557
           T T+E  I  GI+GM G+GKT++AK ++NQ    RF+GSCFLSN+ E +  +NGL+ LQ+
Sbjct: 244 TATDEVCI-VGIHGMPGIGKTSIAKVVFNQFCY-RFEGSCFLSNINETSEQSNGLVLLQE 301

Query: 556 QLFDDVLKSKNIVKVQNIDQGTKLIRDRVCSTKILVVIDDIDHYKQYESLVGP---FACG 386
           QL  D+LK +N V + N+ +G  LI++R+C  ++LVV+DD+ H  Q  +L+G    F  G
Sbjct: 302 QLLHDILK-QNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNALMGERSWFGPG 360

Query: 385 SVVIITTRDEEILDLIKVETRYRYMVNALDYAESLTLFTQHAFENAKPNNKFMVLSEDIL 206
           S VIITT+DE +L  +KV+  YR  V  L   ESL LF+ HAF + KP   ++ LS D++
Sbjct: 361 SRVIITTKDEHLL--LKVDRTYR--VEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVV 416

Query: 205 RHAGGLPLALEVYGSNLYDKSEARWKYFIEKLQRIPDNDIHKRLSISLDAIGTDDPLLKK 26
            + GGLPLALEV GS L  K+ ARWK  I+KL++IP+ +I K+L IS D++  DD  L+ 
Sbjct: 417 DYCGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKLRISFDSL--DDHQLQN 474

Query: 25  MFLDIACF 2
            FLDIACF
Sbjct: 475 TFLDIACF 482


>gb|ABE99703.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 311

 Score =  212 bits (539), Expect = 9e-53
 Identities = 116/238 (48%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
 Frame = -2

Query: 706 GIYGMGGLGKTTLAKALYNQLLGGRFKGSCFLSNVREVTGTTNGLISLQQQLFDDVLKSK 527
           GI+GM G+GKT++AK ++NQ    RF+GSCFLSN+ E +  +NGL+ LQ+QL  D+LK +
Sbjct: 36  GIHGMPGIGKTSIAKVVFNQFCY-RFEGSCFLSNINETSEQSNGLVLLQEQLLHDILK-Q 93

Query: 526 NIVKVQNIDQGTKLIRDRVCSTKILVVIDDIDHYKQYESLVGP---FACGSVVIITTRDE 356
           N V + N+ +G  LI++R+C  ++LVV+DD+ H  Q  +L+G    F  GS VIITT+DE
Sbjct: 94  NTVNISNVVRGLVLIKERICHKRVLVVVDDLAHQNQLNALMGERSWFGPGSRVIITTKDE 153

Query: 355 EILDLIKVETRYRYMVNALDYAESLTLFTQHAFENAKPNNKFMVLSEDILRHAGGLPLAL 176
            +L  +KV+  YR  V  L   ESL LF+ HAF + KP   ++ LS D++ + GGLPLAL
Sbjct: 154 HLL--LKVDRTYR--VEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDYCGGLPLAL 209

Query: 175 EVYGSNLYDKSEARWKYFIEKLQRIPDNDIHKRLSISLDAIGTDDPLLKKMFLDIACF 2
           EV GS L  K+ ARWK  I++L++IP+ +I K+L IS D++  DD  L+  FLDIACF
Sbjct: 210 EVLGSCLSGKNRARWKCLIDELRKIPNREIQKKLRISFDSL--DDHELQNTFLDIACF 265


>gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  212 bits (539), Expect = 9e-53
 Identities = 116/238 (48%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
 Frame = -2

Query: 706 GIYGMGGLGKTTLAKALYNQLLGGRFKGSCFLSNVREVTGTTNGLISLQQQLFDDVLKSK 527
           GI+GM G+GKT++AK ++NQ    RF+GSCFLSN+ E +  +NGL+ LQ+QL  D+LK +
Sbjct: 243 GIHGMPGIGKTSIAKVVFNQFCY-RFEGSCFLSNINETSEQSNGLVLLQEQLLHDILK-Q 300

Query: 526 NIVKVQNIDQGTKLIRDRVCSTKILVVIDDIDHYKQYESLVGP---FACGSVVIITTRDE 356
           N V + N+ +G  LI++R+C  ++LVV+DD+ H  Q  +L+G    F  GS VIITT+DE
Sbjct: 301 NTVNISNVVRGLVLIKERICHKRVLVVVDDLAHQNQLNALMGERSWFGPGSRVIITTKDE 360

Query: 355 EILDLIKVETRYRYMVNALDYAESLTLFTQHAFENAKPNNKFMVLSEDILRHAGGLPLAL 176
            +L  +KV+  YR  V  L   ESL LF+ HAF + KP   ++ LS D++ + GGLPLAL
Sbjct: 361 HLL--LKVDRTYR--VEELKRDESLQLFSWHAFGDTKPAKDYVELSNDVVDYCGGLPLAL 416

Query: 175 EVYGSNLYDKSEARWKYFIEKLQRIPDNDIHKRLSISLDAIGTDDPLLKKMFLDIACF 2
           EV GS L  K+ ARWK  I++L++IP+ +I K+L IS D++  DD  L+  FLDIACF
Sbjct: 417 EVLGSCLSGKNRARWKCLIDELRKIPNREIQKKLRISFDSL--DDHELQNTFLDIACF 472


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