BLASTX nr result

ID: Bupleurum21_contig00027238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027238
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   155   3e-36
emb|CAN81505.1| hypothetical protein VITISV_005564 [Vitis vinifera]   155   3e-36
gb|AFK43698.1| unknown [Medicago truncatula]                          153   2e-35
ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Rici...   152   2e-35
gb|ADE76100.1| unknown [Picea sitchensis]                             152   4e-35

>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/97 (76%), Positives = 86/97 (88%)
 Frame = -3

Query: 291 MIHAVMVMNDQGKPRLLKFYNYQPVEKQHEIIRSIYGVLCSRADNVSNFVNAESIFGPDV 112
           MI AV+VMN QGKPRL KFY+Y P EKQ E+IR ++GVLCSRA+NVSNFV A+S+FGPD 
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 111 RLVYKTFATLYFVFVFDASENELAILDLMQVFVETLD 1
           RLVYK +ATLYFVFVFD+SENELA+LDL+QV VETLD
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLD 97


>emb|CAN81505.1| hypothetical protein VITISV_005564 [Vitis vinifera]
          Length = 151

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/97 (76%), Positives = 86/97 (88%)
 Frame = -3

Query: 291 MIHAVMVMNDQGKPRLLKFYNYQPVEKQHEIIRSIYGVLCSRADNVSNFVNAESIFGPDV 112
           MI AV+VMN QGKPRL KFY+Y P EKQ E+IR ++GVLCSRA+NVSNFV A+S+FGPD 
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 111 RLVYKTFATLYFVFVFDASENELAILDLMQVFVETLD 1
           RLVYK +ATLYFVFVFD+SENELA+LDL+QV VETLD
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLD 97


>gb|AFK43698.1| unknown [Medicago truncatula]
          Length = 166

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/97 (75%), Positives = 85/97 (87%)
 Frame = -3

Query: 291 MIHAVMVMNDQGKPRLLKFYNYQPVEKQHEIIRSIYGVLCSRADNVSNFVNAESIFGPDV 112
           MI AV+VMN QGKPRL KFY ++PVEKQ EIIR+++ VLCSR ++VSNFV+AES FGPD 
Sbjct: 1   MISAVLVMNTQGKPRLAKFYEFRPVEKQQEIIRNVFAVLCSRPEHVSNFVDAESFFGPDA 60

Query: 111 RLVYKTFATLYFVFVFDASENELAILDLMQVFVETLD 1
           RLVYK FATLYFVF+FD SENE A+LDL+QVFVETLD
Sbjct: 61  RLVYKHFATLYFVFIFDGSENEFAMLDLIQVFVETLD 97


>ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Ricinus communis]
           gi|223539270|gb|EEF40863.1| AP-3 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 166

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/97 (75%), Positives = 87/97 (89%)
 Frame = -3

Query: 291 MIHAVMVMNDQGKPRLLKFYNYQPVEKQHEIIRSIYGVLCSRADNVSNFVNAESIFGPDV 112
           MI AV+VMN QGKPRL KFY++  VEKQ E+IRS++GVLCSRA+NVSNF+ A+SIFGPD 
Sbjct: 1   MIKAVLVMNTQGKPRLAKFYDFLSVEKQQELIRSVFGVLCSRAENVSNFMEADSIFGPDS 60

Query: 111 RLVYKTFATLYFVFVFDASENELAILDLMQVFVETLD 1
           RLVYK +ATLYFVFV+D+ ENELA+LDL+QVFVETLD
Sbjct: 61  RLVYKHYATLYFVFVYDSCENELAVLDLIQVFVETLD 97


>gb|ADE76100.1| unknown [Picea sitchensis]
          Length = 164

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/97 (75%), Positives = 86/97 (88%)
 Frame = -3

Query: 291 MIHAVMVMNDQGKPRLLKFYNYQPVEKQHEIIRSIYGVLCSRADNVSNFVNAESIFGPDV 112
           MI AV+V+N QGKPR+ KFY+ QPVEKQ E+IR I+GVLCSRA+NVSNF+ A++IFGP  
Sbjct: 1   MIRAVIVINTQGKPRITKFYDPQPVEKQQELIRDIFGVLCSRAENVSNFIQADAIFGPGT 60

Query: 111 RLVYKTFATLYFVFVFDASENELAILDLMQVFVETLD 1
           +LVYK FATLYFVFVFD+ ENELAILDL+QVFVETLD
Sbjct: 61  KLVYKHFATLYFVFVFDSCENELAILDLIQVFVETLD 97


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