BLASTX nr result

ID: Bupleurum21_contig00027231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00027231
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17905.3| unnamed protein product [Vitis vinifera]              120   1e-25
emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   120   1e-25
ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785...   114   6e-24
ref|XP_002519404.1| conserved hypothetical protein [Ricinus comm...   113   1e-23
ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247...   111   7e-23

>emb|CBI17905.3| unnamed protein product [Vitis vinifera]
          Length = 974

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/93 (66%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
 Frame = -1

Query: 284 TYIKCQMKQPSLEMQWSLQAVSVPSGGLGLSLNATSVHESRM--APSQMLETKLFTSKEE 111
           TY++CQMKQPSLE+QW+LQAVSVPSGGLGLSL+A+SVH+SR       +LETK F +KEE
Sbjct: 376 TYMRCQMKQPSLEIQWALQAVSVPSGGLGLSLHASSVHDSRSQNQAHHVLETKPFAAKEE 435

Query: 110 VDAFTFCAECTINYEKEASLVKSGPQN-KPSWL 15
            D  + CAECT NYEKE  L KSG Q   PSWL
Sbjct: 436 HDKLSCCAECTANYEKEVGLFKSGQQKLLPSWL 468


>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/93 (66%), Positives = 72/93 (77%), Gaps = 3/93 (3%)
 Frame = -1

Query: 284 TYIKCQMKQPSLEMQWSLQAVSVPSGGLGLSLNATSVHESRM--APSQMLETKLFTSKEE 111
           TY++CQMKQPSLE+QW+LQAVSVPSGGLGLSL+A+SVH+SR       +LETK F +KEE
Sbjct: 396 TYMRCQMKQPSLEIQWALQAVSVPSGGLGLSLHASSVHDSRSQNQAHHVLETKPFAAKEE 455

Query: 110 VDAFTFCAECTINYEKEASLVKSGPQN-KPSWL 15
            D  + CAECT NYEKE  L KSG Q   PSWL
Sbjct: 456 HDKLSCCAECTANYEKEVGLFKSGQQKLLPSWL 488


>ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785754 [Glycine max]
          Length = 1051

 Score =  114 bits (286), Expect = 6e-24
 Identities = 61/100 (61%), Positives = 73/100 (73%), Gaps = 6/100 (6%)
 Frame = -1

Query: 284 TYIKCQMKQPSLEMQWSLQAVSVPSGGLGLSLNATSVHESRMA----PSQMLETKLFTS- 120
           TY++CQM+QP LE QWSLQAV VPSGGLGLSL+A+SVH+S+M     PS M+ETKLF+S 
Sbjct: 406 TYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSVHDSKMTISQNPSNMMETKLFSSK 465

Query: 119 KEEVDAFTFCAECTINYEKEASLVKSGPQN-KPSWLISQS 3
           KEE D    C EC  +YEKEA L K G +   PSWL S +
Sbjct: 466 KEEQDKLNCCEECASSYEKEAQLFKPGQKKLLPSWLQSHT 505


>ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
           gi|223541471|gb|EEF43021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1008

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/97 (60%), Positives = 74/97 (76%), Gaps = 7/97 (7%)
 Frame = -1

Query: 284 TYIKCQMKQPSLEMQWSLQAVSVPSGGLGLSLNATSVHESRMA----PSQMLETK--LFT 123
           TY++CQM+QPSLE++W+LQAVSVPSGGLGLSL+ +S+HESRM     PSQ+LETK  +  
Sbjct: 382 TYMRCQMRQPSLEIEWALQAVSVPSGGLGLSLHGSSIHESRMTFNQNPSQVLETKPLISN 441

Query: 122 SKEEVDAFTFCAECTINYEKEASLVKSGPQ-NKPSWL 15
           SK+E D  T C EC  +YEKEA ++KS  Q N P WL
Sbjct: 442 SKDEQDKLTCCPECISSYEKEAQVLKSVQQKNLPPWL 478


>ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
          Length = 1045

 Score =  111 bits (277), Expect = 7e-23
 Identities = 62/106 (58%), Positives = 72/106 (67%), Gaps = 16/106 (15%)
 Frame = -1

Query: 284 TYIKCQMKQPSLEMQWSLQAVSVPSGGLGLSLNAT-------------SVHESRM--APS 150
           TY++CQMKQPSLE+QW+LQAVSVPSGGLGLSL+A+             SVH+SR      
Sbjct: 396 TYMRCQMKQPSLEIQWALQAVSVPSGGLGLSLHASSLINKAEDHCEKVSVHDSRSQNQAH 455

Query: 149 QMLETKLFTSKEEVDAFTFCAECTINYEKEASLVKSGPQN-KPSWL 15
            +LETK F +KEE D  + CAECT NYEKE  L KSG Q   PSWL
Sbjct: 456 HVLETKPFAAKEEHDKLSCCAECTANYEKEVGLFKSGQQKLLPSWL 501


Top